prot_M-pyrifera_M_contig73002.17336.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73002.17336.1
Unique Nameprot_M-pyrifera_M_contig73002.17336.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length119
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73002.17336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004155PBS lyase HEAT-like repeatSMARTSM00567EZ_HEATcoord: 32..61
e-value: 2.3
score: 17.2
coord: 63..91
e-value: 120.0
score: 8.0
NoneNo IPR availablePFAMPF13646HEAT_2coord: 30..88
e-value: 1.1E-7
score: 32.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..111
e-value: 2.0E-8
score: 35.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73002contigM-pyrifera_M_contig73002:302..658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73002.17336.1mRNA_M-pyrifera_M_contig73002.17336.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73002 302..658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73002.17336.1 ID=prot_M-pyrifera_M_contig73002.17336.1|Name=mRNA_M-pyrifera_M_contig73002.17336.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
ERALALGRLATVRGKQHDERAAQLLRDRGEELPVRVEAALALGRSDHPQR
TKLLVRELRDPADVVRFAALRSLAFHGGPEAFEAVRGLEPTLGDCYVARE
AAYAQALLAYRWGLDEGTL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004155PBS_lyase_HEAT
IPR011989ARM-like
IPR016024ARM-type_fold