mRNA_M-pyrifera_M_contig72958.17325.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A812CHG4_SEPPH (WD repeat-containing protein 47 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CHG4_SEPPH) HSP 1 Score: 86.7 bits (213), Expect = 8.830e-17 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERVDGRGVE---RFGTARAVCFLDE-----RTLASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSRA 552 +RTV+F P+GSL A+G+N K+LRI S P ++ + V+ + + H GS+Y + W+ A G N S T D DG +E GT R V F++E TL S G+GD I I D R T + + GH+G ++S+ +++ ++ VSGS D T R W L + A Sbjct: 60 LRTVAFHPSGSLYAIGSNSKVLRICSFPDIQDIQQSHVTQPANVVFKRTKHHKGSIYCLAWNAQGNLIATGS---NDKSVKLTTFSLDTCT--ADGPEIELTCHDGTIRDVLFMEEIANHSSTLVSAGAGDCSICITD--------CERGTLVRKMQGHSGHIYSLCQLSSHMFVSGSQDKTARFWDLRASA 238
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A1I8Q0K7_STOCA (Uncharacterized protein n=3 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8Q0K7_STOCA) HSP 1 Score: 86.3 bits (212), Expect = 9.810e-17 Identity = 61/195 (31.28%), Postives = 96/195 (49.23%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVE---------RVDGRGVE---RFGTARAVCFLDE---RTLASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSL 540 +R F P G+L AVG+N K LRI P Q + + V+ + + H GS+Y + WS DG + ATG D ++ +++GR +E GT R +CFL++ + L SGG+GD + + D G+S +TP+ GHTG +FS+ +N+ V+GS D ++R W + Sbjct: 33 IRCAEFHPDGTLYAVGSNSKTLRICLYPQQNSNTSKTQSFQSSVIFKRTKHHKGSIYCLSWSK------DGEFI--------ATGSNDKTIKIIRYNSEEKQLEGREIELQFHDGTVRDLCFLNDIERKFLVSGGAGDCKVYVSD--CGIS-----TTPVHAYTGHTGHIFSVYSWENNMFVTGSQDKSVRFWDI 206
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A8B8GAC5_9HEMI (WD repeat-containing protein 47 isoform X5 n=4 Tax=Aphididae TaxID=27482 RepID=A0A8B8GAC5_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 2.290e-16 Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E + VL + + H GS+Y + W+ + A G V K + ++G+ +E GT R VCF+++ T L SGG+GD I + D G P L+GH+G + S+ + VSGS D TIR W L +R Sbjct: 52 VRCAEFHPHGSVYAVGSNSKTLRICAYPKVTDIRENHVAQQPTVLFKRTRHHKGSIYCMSWTPDGSLIATGSNDKTVKLM-----KFNAETSNLEGQEIELAMHDGTVRDVCFIEDTTNRSSLLISGGAGDCKIYVTDCETG--------QPYQALSGHSGHILSLYNWGGAMFVSGSHDRTIRFWDLRTR 229
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A6H5G603_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5G603_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 3.960e-16 Identity = 64/200 (32.00%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVE---------RVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E+ + VL + + H GS+Y + W+ ATG D V+ ++G+ E GT R VCFL++ + L SGG+GD I + D + G + +A L+GHTG V S+ + VSGS D T+R W L +R Sbjct: 198 VRCAEFHPNGSIYAVGSNSKTLRICAYPKLSDLREDHSTYQPTVLFKRTRHHKGSIYCMAWTP--------------VGDLMATGSNDKTVKLMRFDPDSSNLEGKETELTMHDGTVRDVCFLEDSSNKSSLLISGGAGDCKIYVTDCATGQAYQA--------LSGHTGHVLSLNNWGGAMFVSGSNDRTVRFWDLRTR 375
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A6H5H7X3_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H7X3_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 4.310e-16 Identity = 64/200 (32.00%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVE---------RVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E+ + VL + + H GS+Y + W+ ATG D V+ ++G+ E GT R VCFL++ + L SGG+GD I + D + G + +A L+GHTG V S+ + VSGS D T+R W L +R Sbjct: 278 VRCAEFHPNGSIYAVGSNSKTLRICAYPKLSDLREDHSTYQPTVLFKRTRHHKGSIYCMAWTP--------------VGDLMATGSNDKTVKLMRFDPDSSNLEGKETELTMHDGTVRDVCFLEDSSNKSSLLISGGAGDCKIYVTDCATGQAYQA--------LSGHTGHVLSLNNWGGAMFVSGSNDRTVRFWDLRTR 455
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A8B8GAP7_9HEMI (WD repeat-containing protein 47 isoform X4 n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8GAP7_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 4.330e-16 Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E + VL + + H GS+Y + W+ + A G V K + ++G+ +E GT R VCF+++ T L SGG+GD I + D G P L+GH+G + S+ + VSGS D TIR W L +R Sbjct: 277 VRCAEFHPHGSVYAVGSNSKTLRICAYPKVTDIRENHVAQQPTVLFKRTRHHKGSIYCMSWTPDGSLIATGSNDKTVKLM-----KFNAETSNLEGQEIELAMHDGTVRDVCFIEDTTNRSSLLISGGAGDCKIYVTDCETG--------QPYQALSGHSGHILSLYNWGGAMFVSGSHDRTIRFWDLRTR 454
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A8B8GB53_9HEMI (WD repeat-containing protein 47 isoform X3 n=5 Tax=Aphididae TaxID=27482 RepID=A0A8B8GB53_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 4.420e-16 Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E + VL + + H GS+Y + W+ + A G V K + ++G+ +E GT R VCF+++ T L SGG+GD I + D G P L+GH+G + S+ + VSGS D TIR W L +R Sbjct: 326 VRCAEFHPHGSVYAVGSNSKTLRICAYPKVTDIRENHVAQQPTVLFKRTRHHKGSIYCMSWTPDGSLIATGSNDKTVKLM-----KFNAETSNLEGQEIELAMHDGTVRDVCFIEDTTNRSSLLISGGAGDCKIYVTDCETG--------QPYQALSGHSGHILSLYNWGGAMFVSGSHDRTIRFWDLRTR 503
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A8B8G9F0_9HEMI (WD repeat-containing protein 47 isoform X1 n=15 Tax=Aphididae TaxID=27482 RepID=A0A8B8G9F0_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 4.740e-16 Identity = 62/191 (32.46%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERVDGRGVE---RFGTARAVCFLDERT-----LASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHSR 549 VR F P GS+ AVG+N K LRI + P + E + VL + + H GS+Y + W+ + A G V K + ++G+ +E GT R VCF+++ T L SGG+GD I + D G P L+GH+G + S+ + VSGS D TIR W L +R Sbjct: 619 VRCAEFHPHGSVYAVGSNSKTLRICAYPKVTDIRENHVAQQPTVLFKRTRHHKGSIYCMSWTPDGSLIATGSNDKTVKLM-----KFNAETSNLEGQEIELAMHDGTVRDVCFIEDTTNRSSLLISGGAGDCKIYVTDCETG--------QPYQALSGHSGHILSLYNWGGAMFVSGSHDRTIRFWDLRTR 796
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A7M7PQ71_STRPU (Uncharacterized protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PQ71_STRPU) HSP 1 Score: 84.7 bits (208), Expect = 8.600e-16 Identity = 64/198 (32.32%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERV---------DGRGVE---RFGTARAVCFLDER----TLASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHS 546 +R V+FDPTGS AVG+N K LRI P E + + VL + + H GS+Y V WS + N+ ATG D +++ V G V+ GT R + F + TL S G+GD I + D G P+ +AGHTG V S+ + ++L SGS D T+R+W + + Sbjct: 511 IRAVTFDPTGSFYAVGSNSKTLRICVYPEMPESSGGGSIQQPKVLFKRMRHHKGSIYCVAWSHTG----------NLV----ATGSNDKLIKLVRFDPDKCNASGPDVDLSFHDGTVRDLVFQKDSPSGTTLISAGAGDCSIYLTDCQQG--------QPVHAMAGHTGHVLSLYTWSGHMLASGSQDNTVRLWDVRT 686
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Match: A0A7M7PNN5_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PNN5_STRPU) HSP 1 Score: 84.7 bits (208), Expect = 8.890e-16 Identity = 64/198 (32.32%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 1 VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQLHGGSVYDVCWSLSAARDADGYGVYNVASAHRATGKGDLVVERV---------DGRGVE---RFGTARAVCFLDER----TLASGGSGDFCIRIWDVSAGLSSEAPRSTPLATLAGHTGPVFSIARITDNLLVSGSADGTIRIWSLHS 546 +R V+FDPTGS AVG+N K LRI P E + + VL + + H GS+Y V WS + N+ ATG D +++ V G V+ GT R + F + TL S G+GD I + D G P+ +AGHTG V S+ + ++L SGS D T+R+W + + Sbjct: 717 IRAVTFDPTGSFYAVGSNSKTLRICVYPEMPESSGGGSIQQPKVLFKRMRHHKGSIYCVAWSHTG----------NLV----ATGSNDKLIKLVRFDPDKCNASGPDVDLSFHDGTVRDLVFQKDSPSGTTLISAGAGDCSIYLTDCQQG--------QPVHAMAGHTGHVLSLYTWSGHMLASGSQDNTVRLWDVRT 892 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72958.17325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72958.17325.1 >prot_M-pyrifera_M_contig72958.17325.1 ID=prot_M-pyrifera_M_contig72958.17325.1|Name=mRNA_M-pyrifera_M_contig72958.17325.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp VRTVSFDPTGSLLAVGTNGKLLRIASVPHQEEEGEEEGVMEMVVLGEFPQback to top mRNA from alignment at M-pyrifera_M_contig72958:194..1000+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72958.17325.1 ID=mRNA_M-pyrifera_M_contig72958.17325.1|Name=mRNA_M-pyrifera_M_contig72958.17325.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig72958:194..1000+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72958:194..1000+ >mRNA_M-pyrifera_M_contig72958.17325.1 ID=mRNA_M-pyrifera_M_contig72958.17325.1|Name=mRNA_M-pyrifera_M_contig72958.17325.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig72958:194..1000+ (Macrocystis pyrifera P11B4 male)back to top |