mRNA_M-pyrifera_M_contig72913.17318.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72913.17318.1
Unique NamemRNA_M-pyrifera_M_contig72913.17318.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0A7S1CEQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEQ9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.600e-46
Identity = 94/245 (38.37%), Postives = 139/245 (56.73%), Query Frame = 1
Query:   73 WFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIE-VRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLELYI 804
            W+ VE   S P  E  +++S+ VR    + + + NPL+E +E    L+G+GL+GDP F L   E   Y  LY+P  PG   G++   NE+VGE W+EL+L AE A P  L  M   VG SAR+ + +ENP      I+   D R    R F +SP  + LPP++    ++E++P+ +G E+      +S  +GEW   V+G+GE P  ++  V++ A AG   S  V F+NPF EPL+V L LY+
Sbjct:    6 WYTVEVQASAPEPEDKLEISSFVRRAVSVEIALANPLNETVEFEVTLDGAGLIGDPVFALAANEEATYELLYSPLTPGVQVGSITFVNEQVGEFWYELSLTAEPAPPTSLDGMTAAVGSSARQQIKLENPTSEEVVIKHTIDNR----RNFAVSPAAVTLPPYSAENCLLEYTPSSIGEEENGEITFSSPTLGEWVYHVTGIGEKPG-MMPEVEITAPAGQQTSRSVTFKNPFSEPLNVVLTLYV 245          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0A2R5GBW7_9STRA (Cilia-and flagella-associated protein 65 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBW7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.110e-45
Identity = 97/265 (36.60%), Postives = 147/265 (55.47%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLEL 798
            L GTY G++ F  S G   R  +W+ VE   + P  E  ++++  VR+   + + + NPLD+ +E    L+G GL+G+PRF L   E   Y  +Y+P   G   G +   N+ VGE+W++L L A+ A PE L L  C VG   R++V++ENP      +E+R V  S  R F + P    L P+ +  V +E+ P+ +G E+    K  S ++GEWE  V G G  PS ++  V+V  S G S ++ V FRNPF +PL V +E+
Sbjct: 2615 LGGTYTGSVTF--SLGP-ERPFLWYTVEIRATSPAPEDTLEITTFVRKAVAVEITLVNPLDQAVEFEVSLQGHGLLGEPRFVLEASEAASYELIYSPLVAGEVEGAVSFVNDMVGEVWYKLALSAQAAPPESLELFRCAVGTHIRQAVVLENPTD--EAVELRAVL-SNRRNFSVRPANPTLAPYAQTSVEIEYLPSSIGEEESGVVKFTSPKLGEWEFHVVGEGTMPS-IMDNVEVSTSVGNSDTSSVVFRNPFQDPLQVVVEI 2872          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: J9HR12_9SPIT (Calponin-homology (CH) domain-containing protein n=2 Tax=Oxytrichidae TaxID=57506 RepID=J9HR12_9SPIT)

HSP 1 Score: 159 bits (402), Expect = 1.800e-40
Identity = 84/269 (31.23%), Postives = 142/269 (52.79%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLELYIEE 810
            L G Y  +I F     D   + +W+ VE     P  E  VD+ A +R+ +   + + NPL+EP+       G GL+GD  F L P  +G Y+ +++P   G  +GT+   NE+VGE W++LNL+AE   P  L L+EC +GK A   V +ENP G    +   D R S    FE+ P  + LP +   ++ +++SP+ +   +     + + ++G+WE  V G G  P+ ++    +  + G + S+++ F+NPF E   V++ +  E+
Sbjct: 2350 LGGVYTASITFQ----DNEERFMWWTVEVRTDSPKPERTVDLKAFIRKAATAEIFLNNPLNEPISFEVFYSGEGLLGDSVFSLEPKSIGTYNLIFSPLMSGEFQGTIGFLNEKVGEFWYDLNLVAEENPPVNLELLECELGKVASHFVTLENPTGSELLL---DYRNSNPTNFEVIPDKIILPAYETQKICIQYSPSNLDVVENGQIIIENPQVGKWEFNVEGKGLIPT-IMEPQPISTAVGNNTSSMLTFKNPFREGSSVQIHMETED 2610          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0A0V0QTE7_PSEPJ (Calponin homology domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QTE7_PSEPJ)

HSP 1 Score: 159 bits (402), Expect = 1.810e-40
Identity = 85/269 (31.60%), Postives = 147/269 (54.65%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLELYIEE 810
            LSG Y G+I F E  G      +W+ V   +  PP +  +D++  +R+   + +E+ NP  +P     L+EG GL+GD  F + P    +Y  +Y P  PG  +G++   NE++GEIW+ELNL+AE +    LP ++C +GK+ +  + +ENP     R+++R+   +  + FEI P  + +PP    +  + + P+ + T Q+A   L ++EIG+W     GLG  P+    ++ +        S V+ F+NPF E + +K+ L +E+
Sbjct: 2565 LSGQYTGSITFTEPDGT----YIWYTVLLNIESPPPQKCLDLTTSLRKAIAVDIELSNPYVDPATFEVLIEGEGLMGDQFFSILPLSTSQYELMYMPLKPGVQKGSIAFVNEKLGEIWYELNLLAEDSGVIRLPQLKCELGKTEQHEINLENPSEKEQRVKIRN---NNPQNFEIYPEEIIIPPMEAVQANIRYLPSALDTIQQAEVILETEEIGKWHYLCFGLGVPPTPFDPKI-LTIGLNKDYSTVIHFKNPFKEQIQIKVILDLED 2825          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: F0XXK4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK4_AURAN)

HSP 1 Score: 154 bits (388), Expect = 1.330e-38
Identity = 89/266 (33.46%), Postives = 133/266 (50.00%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEV-GEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLEL 798
            L G Y G++ F   +G+     VW+ ++  V  P  E  +D+S  VR  +   + + NPL E ++   +L+G GL+G+PRF L   E  G Y   YTP       G++   N+RVGE W+ LNL A  A P  L ++EC VG      V VENP       E+  V     R   +  P + +PP+   +V +++ P+ +G  Q ++  L  D +G+WE   SG G  P  ++      A  G   S +  FRNPF  PLDV ++L
Sbjct: 2644 LGGAYTGSVTFSPPTGE----YVWYTIKVQVDSPLEESAIDISTTVRMAASARISLTNPLPEAIDFDVILQGDGLIGEPRFTLEADEAAGTYELFYTPLIAQSHAGSVVFLNDRVGEFWYRLNLSAAPAEPTRLDVLECAVGARTSTMVTVENP----LNREITLVTQVANRANFVVEPSVSIPPYGSVDVEIQYVPSEIGVVQESTVVLRHDVLGDWEYVASGAGTTPG-LMNEHTPSAIVGEPASYMFSFRNPFGMPLDVDIDL 2900          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: I7MEN4_TETTS (Flagellar associated protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MEN4_TETTS)

HSP 1 Score: 140 bits (354), Expect = 4.550e-34
Identity = 71/263 (27.00%), Postives = 143/263 (54.37%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKL 792
            +SG Y G+I F ++ G      +W+ V      PP++ ++D++  +R+     +++ NP D+ +    + EG GL+GD  F + P ++ +Y   Y P  PG  +G++   +E++GEIW+ELNL A+ +    LP+++C +GK  +  V++ENP     +++V+    S  + FE+ P  + +P + +    +++ P+ +   Q +     ++ IG+W   + G G  P+    ++ +        S+V+ F+NPF +P+ V++
Sbjct: 2551 MSGQYTGSITFTKADGT----YIWWTVLLNTESPPADRIIDLATNIRKPLAFDIDLSNPTDDVVTFEVVFEGEGLLGDQFFNVYPKQMYKYELFYMPLKPGKQKGSVAFLSEKLGEIWYELNLQADDSGVVRLPILKCELGKIEQHEVILENPSNEDVKVKVKI---SNPQNFEVYPENIVIPSYDQISAYIKYRPSQLDKPQTSEVIFETENIGKWVYTLFGQGLPPTNFDTKI-ITIGLNKDYSSVLNFKNPFKDPVQVRI 2805          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0A8J1ZE71_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZE71_9DINO)

HSP 1 Score: 135 bits (341), Expect = 2.430e-32
Identity = 78/264 (29.55%), Postives = 129/264 (48.86%), Query Frame = 1
Query:    7 SGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLEL 798
            +G   G I F +S+     Q  WF VE   S   ++  + +S  VR+   + +++ NPLD+ +     L G GL+G+P F L P E   Y  +++PF P   +G     +ERVGE W++L LIAE A P  LP+ EC +G+ A   V++ENP G    +  +         F++    + L PF +  V + + P+ +   + A+  L +  +G W   + G G AP +    + V +      +  + F+NPF E +   + L
Sbjct: 2297 AGNVTGCIMFRDSNSG---QFSWFTVEVQTSPSKAQQSLSLSCVVRQAIAVDIQLVNPLDDVIVFDVTLVGDGLLGEPEFVLAPKETATYELVFSPFLPAKKKGQAIFVSERVGEFWYDLELIAEQAPPMQLPMFECELGQHASTEVIIENPTGQEVTLRAKSTNKIN---FKVMQSAVFLQPFGQTPVEIRYFPSSIEIVEEATITLENPAVGSWVYVMQGKGHAPRDAKEVISV-SQVQRPATTTITFKNPFLEAVQALVVL 2553          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0A8J2AQU1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2AQU1_9DINO)

HSP 1 Score: 129 bits (323), Expect = 6.020e-30
Identity = 70/242 (28.93%), Postives = 122/242 (50.41%), Query Frame = 1
Query:   73 WFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLEL 798
            W+ VE   S    +  + ++  VR+   + +++ NPLD+ +     L G GL+G+  F L P E   Y  +++PF P   +G     ++RVGE W++L LIAE A P  LP  EC +G+ A   V++ENP G    ++ +         F++    + L PF +  V + + P+ + + + A+  L +  +G W  +V G G AP +    + V++    + S  + F+NPF E +   + L
Sbjct: 2306 WYTVEVRTSPSKPQQALCLTCVVRQAIAVDIQLVNPLDDVIVFDVTLVGDGLLGESEFVLAPKETATYELVFSPFMPAKKKGQAIFVSDRVGEFWYDLELIAEPAPPTQLPSFECELGQHASTEVIIENPTGKELTLKAKSTNKIN---FKVMQSAVFLQPFGQTAVEIRYFPSSIDSVEEATITLENPTVGSWVYQVQGKGLAPRDAK-EIVVVSQVQRATSTTINFKNPFLEAIQALVVL 2543          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: A0BWL8_PARTE (Calponin-homology (CH) domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BWL8_PARTE)

HSP 1 Score: 127 bits (320), Expect = 1.510e-29
Identity = 77/265 (29.06%), Postives = 135/265 (50.94%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLEL 798
            LSG Y G+I F E +G    + +W+ V      P S   +++S  +R+ + I + ++NPL E     A++ G GL+G+ +F +G  + G Y   + PF  G  RG++   N ++GE+W+E  L  E      L L++  +GK  ++ V++ENP      ++ R    S    F++ P  + + PF   +V V ++P+ +   +++     S  IG+W     G G  P++      V        S+VV F+NPF +P+ VK++L
Sbjct: 2263 LSGQYTGSITFTEENG----KYLWYTVFMNTESPKSVQTLELSCLIRQATVIQLTLQNPLPETAIYEAIISGDGLIGEDQFAIGANKEGPYELTFAPFKVGRWRGSVAFVNRQLGEVWYEFILTCEEQPVIKLNLLKASLGKVEQQVVILENPSDQKVTLQSRV---SNPTNFDVLPDELVIQPFDYLKVSVRYTPSSLDQIEQSEIIFTSS-IGKWHYLAFGNGLPPTK-FSAATVSIGLNKDFSSVVHFKNPFKDPITVKIDL 2518          
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Match: I7LY45_TETTS (Flagellar associated protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LY45_TETTS)

HSP 1 Score: 125 bits (314), Expect = 9.500e-29
Identity = 71/269 (26.39%), Postives = 132/269 (49.07%), Query Frame = 1
Query:    4 LSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREGSKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFFPGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVLVENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIVGTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVVPFRNPFDEPLDVKLELYIEE 810
            LSG Y G+I F ++S     +  W+        PP +  +D+   +R+     +E+ NP +E       +EG GLVG P  ++ P     Y   + P   G  +G++   ++ +GEIW+ELNL+AE +    LP+++  +GK  +  + ++NP     ++       S    F++ P  + +P   E  V V + P+++ + Q +  K  ++ IG W+    G+G  P++   ++ V        S+V+ F+NPF + + V + L  E+
Sbjct: 2493 LSGQYTGSITFTDTS---TGEYTWWTALLNTESPPCQKKIDMITTLRKAIAFDIEITNPSNETANFEVFIEGDGLVGIPYMQIPPKSSQMYELFFLPLKVGKQQGSIAFVSDHLGEIWYELNLVAEDSQIIRLPMLKAELGKVEQHEIRLDNPSNEDVKVYTYVSNPSN---FDVLPEQIVIPANDEISVYVRYMPSVLDSTQTSEIKFQTETIGRWDYLAFGMGIPPTQFEPKI-VTIGLNKDFSSVILFKNPFKDQIQVNILLESED 2754          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72913.17318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A7S1CEQ9_9STRA1.600e-4638.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GBW7_9STRA1.110e-4536.60Cilia-and flagella-associated protein 65 n=1 Tax=H... [more]
J9HR12_9SPIT1.800e-4031.23Calponin-homology (CH) domain-containing protein n... [more]
A0A0V0QTE7_PSEPJ1.810e-4031.60Calponin homology domain n=1 Tax=Pseudocohnilembus... [more]
F0XXK4_AURAN1.330e-3833.46Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
I7MEN4_TETTS4.550e-3427.00Flagellar associated protein n=1 Tax=Tetrahymena t... [more]
A0A8J1ZE71_9DINO2.430e-3229.55Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A8J2AQU1_9DINO6.020e-3028.93Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0BWL8_PARTE1.510e-2929.06Calponin-homology (CH) domain-containing protein n... [more]
I7LY45_TETTS9.500e-2926.39Flagellar associated protein n=1 Tax=Tetrahymena t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72913contigM-pyrifera_M_contig72913:164..1114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score162.9
Seed ortholog evalue2e-37
Seed eggNOG ortholog3055.EDP04683
Preferred nameFAP47
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Flagellar associated protein
EggNOG OGs2CBV6@1,2QQ4Q@2759,37YRD@33090
COG Functional cat.S
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
Exons2
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816626.4178457-CDS-M-pyrifera_M_contig72913:163..9151622816626.4178457-CDS-M-pyrifera_M_contig72913:163..915Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72913 164..915 -
1692278084.9962943-CDS-M-pyrifera_M_contig72913:163..9151692278084.9962943-CDS-M-pyrifera_M_contig72913:163..915Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72913 164..915 -
1622816626.428873-CDS-M-pyrifera_M_contig72913:1056..11141622816626.428873-CDS-M-pyrifera_M_contig72913:1056..1114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72913 1057..1114 -
1692278085.0109293-CDS-M-pyrifera_M_contig72913:1056..11141692278085.0109293-CDS-M-pyrifera_M_contig72913:1056..1114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72913 1057..1114 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72913.17318.1prot_M-pyrifera_M_contig72913.17318.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72913 164..1114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72913.17318.1

>prot_M-pyrifera_M_contig72913.17318.1 ID=prot_M-pyrifera_M_contig72913.17318.1|Name=mRNA_M-pyrifera_M_contig72913.17318.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
QLSGTYAGTINFIESSGDGRRQVVWFGVEATVSGPPSEGVVDVSARVREG
SKIAVEVRNPLDEPLEMYALLEGSGLVGDPRFRLGPGEVGEYSFLYTPFF
PGHTRGTLRLTNERVGEIWWELNLIAEHAAPEVLPLMECPVGKSARRSVL
VENPRGIPARIEVRDVRGSGARFFEISPPVMDLPPFTEGEVVVEFSPTIV
GTEQRASFKLASDEIGEWEVRVSGLGEAPSEVLGRVDVMASAGASGSAVV
PFRNPFDEPLDVKLELYIEE
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mRNA from alignment at M-pyrifera_M_contig72913:164..1114-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72913.17318.1 ID=mRNA_M-pyrifera_M_contig72913.17318.1|Name=mRNA_M-pyrifera_M_contig72913.17318.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=951bp|location=Sequence derived from alignment at M-pyrifera_M_contig72913:164..1114- (Macrocystis pyrifera P11B4 male)
CAGCTCTCTGGCACATACGCTGGTACAATTAATTTCATCGAATCTTCTGG TGATGGGCGTGGAGATGATGATGAAGATGATGAAGAGGATGGAGATGGGG ACGTTGGAGAAGAAGGTGATGGAGAGGATGGTGATGGTGATGGTGGTGAA AGTGGATTATCTGCTGCATCGAAGCGGGTTTCGAGGGCATTGAAAGAAGG CCGACAAGTTGTATGGTTTGGTGTGGAAGCAACTGTCTCAGGGCCTCCTT CCGAAGGTGTTGTAGATGTTTCCGCTCGTGTGCGCGAAGGATCGAAAATC GCTGTCGAGGTTCGAAACCCATTGGATGAACCATTGGAAATGTATGCATT GTTGGAAGGATCTGGATTAGTTGGTGATCCGCGCTTCCGCCTTGGACCAG GTGAAGTTGGAGAGTACTCTTTCCTCTACACCCCATTCTTCCCTGGACAC ACTCGGGGAACTCTTCGACTGACCAATGAACGCGTGGGAGAAATTTGGTG GGAGTTGAATTTGATTGCAGAACATGCTGCGCCAGAAGTTCTGCCACTGA TGGAATGCCCAGTAGGGAAAAGTGCTCGACGTTCCGTATTGGTAGAAAAC CCACGTGGAATACCAGCACGCATCGAAGTTCGTGATGTTCGTGGCAGTGG TGCACGCTTCTTTGAAATTTCTCCTCCAGTCATGGACTTGCCGCCATTCA CAGAAGGAGAGGTGGTTGTTGAGTTTTCGCCAACAATTGTGGGAACAGAA CAACGAGCTTCCTTCAAACTTGCTTCGGATGAAATTGGAGAATGGGAAGT GCGTGTGAGTGGGTTAGGGGAAGCACCGTCTGAAGTGTTAGGTCGCGTGG ATGTGATGGCATCCGCTGGTGCATCAGGTTCTGCAGTGGTACCATTCCGC AATCCATTTGACGAACCACTGGATGTGAAACTTGAGCTCTATATTGAAGA A
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72913:164..1114-

>mRNA_M-pyrifera_M_contig72913.17318.1 ID=mRNA_M-pyrifera_M_contig72913.17318.1|Name=mRNA_M-pyrifera_M_contig72913.17318.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig72913:164..1114- (Macrocystis pyrifera P11B4 male)
CAGCTCTCTGGCACATACGCTGGTACAATTAATTTCATCGAATCTTCTGG
TGATGGGCCAGCTCTCTGGCACATACGCTGGTACAATTAATTTCATCGAA
TCTTCTGGTGATGGGCGCCGACAAGTTGTATGGTTTGGTGTGGAAGCAAC
TGTCTCAGGGCCTCCTTCCGAAGGTGTTGTAGATGTTTCCGCTCGTGTGC
GCGAAGGATCGAAAATCGCTGTCGAGGTTCGAAACCCATTGGATGAACCA
TTGGAAATGTATGCATTGTTGGAAGGATCTGGATTAGTTGGTGATCCGCG
CTTCCGCCTTGGACCAGGTGAAGTTGGAGAGTACTCTTTCCTCTACACCC
CATTCTTCCCTGGACACACTCGGGGAACTCTTCGACTGACCAATGAACGC
GTGGGAGAAATTTGGTGGGAGTTGAATTTGATTGCAGAACATGCTGCGCC
AGAAGTTCTGCCACTGATGGAATGCCCAGTAGGGAAAAGTGCTCGACGTT
CCGTATTGGTAGAAAACCCACGTGGAATACCAGCACGCATCGAAGTTCGT
GATGTTCGTGGCAGTGGTGCACGCTTCTTTGAAATTTCTCCTCCAGTCAT
GGACTTGCCGCCATTCACAGAAGGAGAGGTGGTTGTTGAGTTTTCGCCAA
CAATTGTGGGAACAGAACAACGAGCTTCCTTCAAACTTGCTTCGGATGAA
ATTGGAGAATGGGAAGTGCGTGTGAGTGGGTTAGGGGAAGCACCGTCTGA
AGTGTTAGGTCGCGTGGATGTGATGGCATCCGCTGGTGCATCAGGTTCTG
CAGTGGTACCATTCCGCAATCCATTTGACGAACCACTGGATGTGAAACTT
GAGCTCTATATTGAAGAAGCCGACAAGTTGTATGGTTTGGTGTGGAAGCA
ACTGTCTCAGGGCCTCCTTCCGAAGGTGTTGTAGATGTTTCCGCTCGTGT
GCGCGAAGGATCGAAAATCGCTGTCGAGGTTCGAAACCCATTGGATGAAC
CATTGGAAATGTATGCATTGTTGGAAGGATCTGGATTAGTTGGTGATCCG
CGCTTCCGCCTTGGACCAGGTGAAGTTGGAGAGTACTCTTTCCTCTACAC
CCCATTCTTCCCTGGACACACTCGGGGAACTCTTCGACTGACCAATGAAC
GCGTGGGAGAAATTTGGTGGGAGTTGAATTTGATTGCAGAACATGCTGCG
CCAGAAGTTCTGCCACTGATGGAATGCCCAGTAGGGAAAAGTGCTCGACG
TTCCGTATTGGTAGAAAACCCACGTGGAATACCAGCACGCATCGAAGTTC
GTGATGTTCGTGGCAGTGGTGCACGCTTCTTTGAAATTTCTCCTCCAGTC
ATGGACTTGCCGCCATTCACAGAAGGAGAGGTGGTTGTTGAGTTTTCGCC
AACAATTGTGGGAACAGAACAACGAGCTTCCTTCAAACTTGCTTCGGATG
AAATTGGAGAATGGGAAGTGCGTGTGAGTGGGTTAGGGGAAGCACCGTCT
GAAGTGTTAGGTCGCGTGGATGTGATGGCATCCGCTGGTGCATCAGGTTC
TGCAGTGGTACCATTCCGCAATCCATTTGACGAACCACTGGATGTGAAAC
TTGAGCTCTATATTGAAGAA
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