prot_M-pyrifera_M_contig72905.17315.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig72905.17315.1
Unique Name	prot_M-pyrifera_M_contig72905.17315.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	106

Homology

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: UPI001FCCD08A (cytochrome b6/f complex subunit IV n=1 Tax=Solanum ternatum TaxID=743523 RepID=UPI001FCCD08A)

HSP 1 Score: 217 bits (553), Expect = 3.590e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:    7 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 112

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A6G8QRT5_9ROSA (Cytochrome b6-f complex subunit 4 n=1 Tax=Rubus amabilis TaxID=616954 RepID=A0A6G8QRT5_9ROSA)

HSP 1 Score: 217 bits (553), Expect = 3.960e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   10 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 115

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A0D3RVR9_9LAMI (Cytochrome b6-f complex subunit 4 n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A0D3RVR9_9LAMI)

HSP 1 Score: 217 bits (553), Expect = 3.960e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   10 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 115

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A518QWG4_ULMAM (Cytochrome b6-f complex subunit 4 n=5 Tax=cellular organisms TaxID=131567 RepID=A0A518QWG4_ULMAM)

HSP 1 Score: 217 bits (553), Expect = 4.520e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   14 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 119

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A1B1W4Y3_ARATH (Cytochrome b6-f complex subunit 4 n=10 Tax=Embryophyta TaxID=3193 RepID=A0A1B1W4Y3_ARATH)

HSP 1 Score: 217 bits (553), Expect = 5.520e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   20 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 125

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A7G9IZ89_9ERIC (Cytochrome b6-f complex subunit 4 n=34 Tax=Pentapetalae TaxID=1437201 RepID=A0A7G9IZ89_9ERIC)

HSP 1 Score: 217 bits (553), Expect = 5.700e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   21 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 126

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A7M4CD11_9GENT (Cytochrome b6-f complex subunit 4 n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7M4CD11_9GENT)

HSP 1 Score: 217 bits (553), Expect = 5.700e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   21 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 126

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: PETD_CUCSA (Cytochrome b6-f complex subunit 4 n=2036 Tax=Eukaryota TaxID=2759 RepID=PETD_CUCSA)

HSP 1 Score: 217 bits (553), Expect = 5.890e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   22 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 127

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: A0A7T1TVJ4_9LAMI (Cytochrome b6-f complex subunit 4 n=11 Tax=Pentapetalae TaxID=1437201 RepID=A0A7T1TVJ4_9LAMI)

HSP 1 Score: 217 bits (553), Expect = 5.890e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   22 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 127

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BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Match: PETD_SOLLC (Cytochrome b6-f complex subunit 4 n=76 Tax=Magnoliopsida TaxID=3398 RepID=PETD_SOLLC)

HSP 1 Score: 217 bits (553), Expect = 5.890e-71
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query:    1 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQNPFRRP 106
            MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFL NVNKFQNPFRRP
Sbjct:   22 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRP 127

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig72905.17315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001FCCD08A	3.590e-71	99.06	cytochrome b6/f complex subunit IV n=1 Tax=Solanum...	[more]
A0A6G8QRT5_9ROSA	3.960e-71	99.06	Cytochrome b6-f complex subunit 4 n=1 Tax=Rubus am...	[more]
A0A0D3RVR9_9LAMI	3.960e-71	99.06	Cytochrome b6-f complex subunit 4 n=4 Tax=Pentapet...	[more]
A0A518QWG4_ULMAM	4.520e-71	99.06	Cytochrome b6-f complex subunit 4 n=5 Tax=cellular...	[more]
A0A1B1W4Y3_ARATH	5.520e-71	99.06	Cytochrome b6-f complex subunit 4 n=10 Tax=Embryop...	[more]
A0A7G9IZ89_9ERIC	5.700e-71	99.06	Cytochrome b6-f complex subunit 4 n=34 Tax=Pentape...	[more]
A0A7M4CD11_9GENT	5.700e-71	99.06	Cytochrome b6-f complex subunit 4 n=2 Tax=Pentapet...	[more]
PETD_CUCSA	5.890e-71	99.06	Cytochrome b6-f complex subunit 4 n=2036 Tax=Eukar...	[more]
A0A7T1TVJ4_9LAMI	5.890e-71	99.06	Cytochrome b6-f complex subunit 4 n=11 Tax=Pentape...	[more]
PETD_SOLLC	5.890e-71	99.06	Cytochrome b6-f complex subunit 4 n=76 Tax=Magnoli...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.510		coord: 1..45 e-value: 3.2E-30 score: 105.7
None	No IPR available	GENE3D	1.10.287.980		coord: 46..106 e-value: 1.3E-24 score: 88.3
None	No IPR available	PANTHER	PTHR19271:SF16		coord: 2..106
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 2..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 95..106
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 74..94
None	No IPR available	TMHMM	TMhelix		coord: 74..96
None	No IPR available	TMHMM	TMhelix		coord: 15..37
IPR005798	Cytochrome b/b6, C-terminal	PFAM	PF00032	Cytochrom_B_C	coord: 44..98 e-value: 9.2E-16 score: 58.0
IPR005798	Cytochrome b/b6, C-terminal	PROSITE	PS51003	CYTB_CTER	coord: 44..106 score: 15.179
IPR005870	Cytochrome b6/f complex, subunit IV	TIGRFAM	TIGR01156	TIGR01156	coord: 1..106 e-value: 5.4E-67 score: 222.6
IPR036150	Cytochrome b/b6, C-terminal domain superfamily	SUPERFAMILY	81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 1..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig72905	contig	M-pyrifera_M_contig72905:797..1114 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig72905.17315.1	mRNA_M-pyrifera_M_contig72905.17315.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig72905 692..1114 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig72905.17315.1 ID=prot_M-pyrifera_M_contig72905.17315.1|Name=mRNA_M-pyrifera_M_contig72905.17315.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFAT
PLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLVNVNKFQ
NPFRRP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005798	Cyt_b/b6_C
IPR005870	Cyt_b6/f_cplx_suIV
IPR036150	Cyt_b/b6_C_sf