prot_M-pyrifera_M_contig72905.17314.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72905.17314.1
Unique Nameprot_M-pyrifera_M_contig72905.17314.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length47
Homology
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BLAST of mRNA_M-pyrifera_M_contig72905.17314.1 vs. uniprot
Match: M1A200_SOLTU (Uncharacterized protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1A200_SOLTU)

HSP 1 Score: 47.0 bits (110), Expect = 7.280e-6
Identity = 24/29 (82.76%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:   13 KNVSLFQPPRKPHTEDRPVRLKRIFSMIR 41
            K VSLFQ P KP+TEDR VRLKRIFSMIR
Sbjct:   10 KCVSLFQSPCKPYTEDRLVRLKRIFSMIR 38
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72905.17314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
M1A200_SOLTU7.280e-682.76Uncharacterized protein n=1 Tax=Solanum tuberosum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72905contigM-pyrifera_M_contig72905:35..175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72905.17314.1mRNA_M-pyrifera_M_contig72905.17314.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72905 35..175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72905.17314.1 ID=prot_M-pyrifera_M_contig72905.17314.1|Name=mRNA_M-pyrifera_M_contig72905.17314.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp
MPLSICHILIHNKNVSLFQPPRKPHTEDRPVRLKRIFSMIRPDHVVY
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