mRNA_M-pyrifera_M_contig72751.17277.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: UPI00058CF70A (PKD domain-containing protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00058CF70A) HSP 1 Score: 188 bits (477), Expect = 5.690e-53 Identity = 106/185 (57.30%), Postives = 136/185 (73.51%), Query Frame = 1 Query: 7 NWSKYETQVSGE-GDFVIQLLADNCSWVYLDNELIGYQDPSITNTA----YGVSLDGA-HTLSFVIFDGGGLTGGKFRLETTESYGNNPPPPIGEETPVNNAPVANAGPDQTLEATGTTTQVNLTGSATDADGDALTYSWSNGAIDSSTIVNLSLGVHTFTLTVSDGTD--SDTDEVVITIVNES 537 +W+KY T ++G+ GD+V+Q +ADNCSW+YLD IG+QD + TN+ Y ++LDG LSF+IFDGGG GGKFRLET SY +N P N+APVA+AG DQTLEATG TT V LTGS TDADGD LTYSWS+G++ SST V+L +GVH+FTLTV+D TD +DTDEV++ I + + Sbjct: 150 SWTKYSTTINGDAGDYVVQFVADNCSWIYLDGNQIGFQDANFTNSGNNGKYPLTLDGTDQELSFIIFDGGGEAGGKFRLETLSSYTDNGGSEDDFGIPSNSAPVADAGTDQTLEATGPTTFVTLTGSGTDADGDNLTYSWSDGSLGSSTTVSLGVGVHSFTLTVAD-TDGATDTDEVIVEITDNT 333
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A350PAS9_9BACT (PLAT domain-containing protein n=3 Tax=Balneola sp. TaxID=2024824 RepID=A0A350PAS9_9BACT) HSP 1 Score: 180 bits (457), Expect = 3.060e-48 Identity = 103/167 (61.68%), Postives = 122/167 (73.05%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNE------LIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLETTESYGNNPPPPIGEETPVNNAPVANAGPDQTLEATGTTTQVNLTGS-ATDADGDALTYSWS-NGAI---DSSTIVNLSLGVHTF 468 G NWSKYET+VSG G+FVIQLLADNCSWVYL +E L+GYQ + + YGV+LDG H LSFVIFDGGGL GGKFRLETTE +G PPP NNAPVA+AG DQTL ATG TT V L GS ++DADGDAL+YSW+ +G++ D+S NL+ G +TF Sbjct: 336 GHNWSKYETEVSGNGEFVIQLLADNCSWVYLADENGDNPRLVGYQGATSSPGEYGVTLDGTHQLSFVIFDGGGLAGGKFRLETTEEFGGTPPP-----IDTNNAPVADAGADQTLTATGATTSVTLDGSGSSDADGDALSYSWTLDGSVVSTDASFSTNLADGSYTF 497
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A2D9FYD1_9BACT (PKD domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FYD1_9BACT) HSP 1 Score: 171 bits (434), Expect = 1.860e-45 Identity = 109/188 (57.98%), Postives = 127/188 (67.55%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDN------ELIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLETTESYGNNPPPPIGEETPVNNAPVANAGPDQTLEATGTTTQ-VNLTGSAT-DAD-GDALTYSWS-NGAIDS--STIVNLSLGVHTFTLTVSDGTD-SDTDEVVITI 525 G NWSKYET+V+G GDFV+QLLADNCSWVYL + +L+GYQ T Y V+LDG H L+FVIFDGGGL GGKFRLETTES+G PPPPI N APVA+AG + +EATGTT V L GS + D D GD L+YSW NG I + +T V L +G HT TLTV+D SDTD I I Sbjct: 315 GHNWSKYETEVTGNGDFVVQLLADNCSWVYLADGNGNNPQLVGYQPAVSTPGEYSVTLDGTHKLTFVIFDGGGLAGGKFRLETTESFGGTPPPPI----VTNTAPVADAGEYENVEATGTTNNLVTLDGSNSYDPDEGDELSYSWEVNGEIVNGVTTNVGLPIGEHTVTLTVTDQDGLSDTDTATIII 498
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A2D4ZVN3_9BACT (PKD domain-containing protein (Fragment) n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D4ZVN3_9BACT) HSP 1 Score: 158 bits (400), Expect = 7.180e-41 Identity = 84/128 (65.62%), Postives = 93/128 (72.66%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNE------LIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLETTESYGNNPPPPIGEETPVNNAPVANAGPDQTLEATGTTTQVNLTG 366 G NWSKYET+VSG G+FVIQLLADNCSWVYL +E L+GYQ + + YGV+LDG H LSFVIFDGGGL GGKFRLETTE +G PPP NNAPVA+AG DQTL ATG TT V L G Sbjct: 344 GHNWSKYETEVSGNGEFVIQLLADNCSWVYLADENGDNPRLVGYQGATSSPGEYGVTLDGTHQLSFVIFDGGGLAGGKFRLETTEEFGGTPPP-----IDTNNAPVADAGADQTLTATGATTSVTLDG 466
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A356X0T4_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A356X0T4_9BACT) HSP 1 Score: 117 bits (293), Expect = 2.320e-27 Identity = 80/156 (51.28%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 223 LETTESYGNNPPPPIGEETPVNNAPVANAGPDQTLEATGTTTQVNLTGS-ATDADGDALTYSWSNGAIDSSTIVNLSLGVHTFTLTVSDGTDSDTDEVVITIVNESPVGDAV--ITAFRLG--TNTVFNGSSSTDPNDTIVSYFWDFGDGSTSSEV 675 +ET S+ PP TPVNNAPVA+AG DQT+ ATG TT V L G+ ++D DGD LTYSWSNGA ++ VNL+ G + TLTVSDG +SDTDEV IT+VN PV +A IT LG T+ GS S D + Y W GD TS+ V Sbjct: 1 METASSFDGEVPPTYEPPTPVNNAPVADAGTDQTVTATGQTTAVILDGTGSSDVDGDGLTYSWSNGATGATPTVNLADGTPSLTLTVSDGEESDTDEVTITVVNTIPVANAGQDITKEALGPQTSITLTGSGSDVDGDELT-YVWSTGDMGTSTTV 155
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: UPI00196A507E (hypothetical protein n=1 Tax=Idiomarina mangrovi TaxID=2487133 RepID=UPI00196A507E) HSP 1 Score: 115 bits (289), Expect = 1.640e-26 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLET 231 GQNWS+Y +VSG GDFV+ LLADNCSW+YLD L+GYQ P Y VSLDG HTL F+IFDGGGL GG F+LET Sbjct: 106 GQNWSRYTKEVSGNGDFVLNLLADNCSWIYLDGTLVGYQGPVSVPGEYPVSLDGTHTLDFLIFDGGGLAGGMFQLET 182
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A7Z6ZVV5_9GAMM (Uncharacterized protein n=1 Tax=Pseudidiomarina aestuarii TaxID=624146 RepID=A0A7Z6ZVV5_9GAMM) HSP 1 Score: 114 bits (284), Expect = 8.390e-26 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLET 231 G NW++Y T+VSG G FV+ LLADNCSW+Y+D +L+GYQ + T ++Y V+LDG HTL F+IFDGGGL GG FRLET Sbjct: 106 GHNWTRYSTEVSGNGQFVLNLLADNCSWIYVDGQLVGYQGLTSTASSYPVTLDGDHTLDFLIFDGGGLAGGMFRLET 182
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A1G0LDK8_9BACT (Uncharacterized protein n=2 Tax=unclassified Gemmatimonadetes TaxID=234665 RepID=A0A1G0LDK8_9BACT) HSP 1 Score: 114 bits (286), Expect = 9.010e-26 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPSI--TNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLETTESY 243 G +W+KY T VSG+G +V+QLLADNCSW+YLDN+L G Q + TNT Y V+L G HTL+F+IFDGGG GGKFRLET +S+ Sbjct: 70 GHSWTKYSTPVSGQGRYVVQLLADNCSWIYLDNQLAGVQGAAFDATNTKYEVTLSGNHTLTFIIFDGGGAAGGKFRLETYDSF 152
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A5H2Y453_9GAMM (Uncharacterized protein n=1 Tax=Pseudoalteromonas sp. A25 TaxID=116092 RepID=A0A5H2Y453_9GAMM) HSP 1 Score: 110 bits (275), Expect = 1.590e-24 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 1 GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPS--ITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLET 231 GQNW+KY V+G+G+FV++LLADNCSWVY+D L+G+Q S +N Y VSLDG H L F+IFDGGGL GG FRLET Sbjct: 105 GQNWTKYAVSVTGQGEFVLKLLADNCSWVYIDGTLVGFQSASWSASNITYPVSLDGEHNLEFLIFDGGGLAGGMFRLET 183
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Match: A0A4R6NYV4_9GAMM (Uncharacterized protein n=1 Tax=Idiomarina aquatica TaxID=1327752 RepID=A0A4R6NYV4_9GAMM) HSP 1 Score: 109 bits (273), Expect = 3.590e-24 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 4 QNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPSITNTAYGVSLDGAHTLSFVIFDGGGLTGGKFRLET 231 QNW++Y +VSG G+FV+ LLADNCSW+Y+D L+GYQ T Y V+LDG HTL F+IFDGGGL GG FRLET Sbjct: 112 QNWTRYSKEVSGNGEFVLNLLADNCSWIYIDGTLVGYQPAVSTPGVYPVTLDGDHTLDFIIFDGGGLAGGLFRLET 187 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72751.17277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72751.17277.1 >prot_M-pyrifera_M_contig72751.17277.1 ID=prot_M-pyrifera_M_contig72751.17277.1|Name=mRNA_M-pyrifera_M_contig72751.17277.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=290bp GQNWSKYETQVSGEGDFVIQLLADNCSWVYLDNELIGYQDPSITNTAYGVback to top mRNA from alignment at M-pyrifera_M_contig72751:242..1111- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72751.17277.1 ID=mRNA_M-pyrifera_M_contig72751.17277.1|Name=mRNA_M-pyrifera_M_contig72751.17277.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig72751:242..1111- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72751:242..1111- >mRNA_M-pyrifera_M_contig72751.17277.1 ID=mRNA_M-pyrifera_M_contig72751.17277.1|Name=mRNA_M-pyrifera_M_contig72751.17277.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1740bp|location=Sequence derived from alignment at M-pyrifera_M_contig72751:242..1111- (Macrocystis pyrifera P11B4 male)back to top |