mRNA_M-pyrifera_M_contig7258.17247.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A2B4RAU9_STYPI (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RAU9_STYPI) HSP 1 Score: 75.9 bits (185), Expect = 1.630e-13 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 4 YKAARVICPRTISLYADAHAVELKGLLGFTVVTLELLLVLKAELVVYFPLVKNLPD-FSISTRDV----WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 +KAAR+ CP + + A L+ L F + + A L FPL D +++ D W HK LP W LV++L L QPSSA ER FS++ N FG+QQ + L D E SVMLR+N Sbjct: 1102 FKAARLCCPVQVQAL-NPTAASLEELRNFPFANHDATI---ANLAQEFPLYVAASDGVTVTCEDDKLTWWANHKDTLPHWSSLVKKLLLIQPSSASAERVFSLLTNAFGSQQESALQDYLEASVMLRYN 1226
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A1X7TYF9_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TYF9_AMPQE) HSP 1 Score: 72.0 bits (175), Expect = 3.440e-12 Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 1 MYKAARVICPRTISLYADAHAVELKGLLGFTVVTLELLLVLKAELVVYFPLVKNLPDFSISTRDVWLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 ++KAAR P+ I HA +L L + + + + LK+EL Y K++ D + + W ++ LP W ++++L QPSSA +ER FS++K+ FG +Q T L D E S+ML++N Sbjct: 528 IFKAARYFSPQMICSLKP-HASDLNQLACISFINSQAIEELKSELPKYMARAKDI-DKEVCPLNWWKQNQDDLPVWSREAKKVFLLQPSSASVERVFSLLKSSFGDKQETALQDYIEASLMLQYN 650
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A2B4RHQ8_STYPI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RHQ8_STYPI) HSP 1 Score: 70.9 bits (172), Expect = 8.880e-12 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 196 WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 W HK LP W LV++L L QPSSA ER FS++ N FG+QQ + L D E SVMLR+N Sbjct: 692 WANHKDTLPHWSSLVKKLLLIQPSSASAERVFSLLTNAFGSQQESALQDYLEASVMLRYN 751
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A1X7TFE2_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFE2_AMPQE) HSP 1 Score: 59.7 bits (143), Expect = 7.040e-8 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 4 YKAARVICPRTIS-LYADAHAVE-LKGLLGFTVVTLELLLVLKAELVVYFPLVKNLPDFSISTRDVWLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 +KAAR+ P ++ L DA V L+ F E L LK+EL Y L +++ + + W + ++P W R++ L QPSSA +ER FS++ N F +QQ L D EL++M+R+N Sbjct: 517 FKAARLFLPTKVNNLKPDASTVNTLRAFKFFD--NEETLKQLKSELPTYLALTEDVVE--VDPLLWWKQNSNKVPFWADACRKVLLCQPSSASVERVFSLL-NQFNSQQQAALEDYVELALMIRYN 637
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 7.690e-7 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 91 TVVTLELLLVLKAELVVYFPLVKNLPDFSISTRDV---------WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 T+ TL++L +K ++V L+K DF ++ D W +K++LP W LV + L QPSSA +ER FS+++ F +Q V +D SV+L++N Sbjct: 51 TIRTLKVLPFVKKKMV--RGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYN 152
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A1X7V8N5_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V8N5_AMPQE) HSP 1 Score: 54.7 bits (130), Expect = 1.490e-6 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 202 AHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 AH +LP W +++ L QPSSA +ERAFSV K F QQ + L D E S+M ++N Sbjct: 131 AHADKLPSWGETAKKVLLLQPSSAAVERAFSVYKFTFSEQQLSSLEDYIEASMMPQYN 188
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.150e-6 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 91 TVVTLELLLVLKAELVVYFPLVKNLPDFSISTRDV---------WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 T+ TL++L +K ++V L+K DF ++ D W +K++LP W LV + L QPSSA +ER FS+++ F +Q V +D SV+L++N Sbjct: 579 TIRTLKVLPFVKKKMV--RGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYN 680
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 2.180e-6 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 91 TVVTLELLLVLKAELVVYFPLVKNLPDFSISTRDV---------WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 T+ TL++L +K ++V L+K DF ++ D W +K++LP W LV + L QPSSA +ER FS+++ F +Q V +D SV+L++N Sbjct: 662 TIRTLKVLPFVKKKMV--RGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYN 763
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 3.230e-5 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 151 LVKNLPDFSISTRDV---------WLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 L+K DF ++ D W +K+ LP W LV + L QPSSA +ER FS+++ F +Q +V +D S +L+++ Sbjct: 305 LLKEKNDFYVAATDTDTDYDNMTFWSDNKKNLPTWHELVLDVVLLQPSSAFMERVFSILRCCFSERQESVYSDRICASALLKYS 388
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Match: A0A6H5KL31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL31_9PHAE) HSP 1 Score: 51.2 bits (121), Expect = 6.370e-5 Identity = 26/78 (33.33%), Postives = 39/78 (50.00%), Query Frame = 1 Query: 142 YFPLVKNLPDFSISTRDVWLAHKQQLPKWFGLVRRLWLTQPSSAMLERAFSVMKNIFGAQQTTVLNDLFELSVMLRHN 375 Y+ N D W K++LP W LV + L+ PSSA +ER FS+++ F +Q V +D S +L+ N Sbjct: 492 YYMAASNNTDIEYGHMAFWKDKKKRLPTWHALVLDVALSPPSSAYMERVFSILRCCFNERQQHVYSDRICASALLKFN 569 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7258.17247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7258.17247.1 >prot_M-pyrifera_M_contig7258.17247.1 ID=prot_M-pyrifera_M_contig7258.17247.1|Name=mRNA_M-pyrifera_M_contig7258.17247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MYKAARVICPRTISLYADAHAVELKGLLGFTVVTLELLLVLKAELVVYFPback to top mRNA from alignment at M-pyrifera_M_contig7258:1816..2190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7258.17247.1 ID=mRNA_M-pyrifera_M_contig7258.17247.1|Name=mRNA_M-pyrifera_M_contig7258.17247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig7258:1816..2190+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7258:1816..2190+ >mRNA_M-pyrifera_M_contig7258.17247.1 ID=mRNA_M-pyrifera_M_contig7258.17247.1|Name=mRNA_M-pyrifera_M_contig7258.17247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig7258:1816..2190+ (Macrocystis pyrifera P11B4 male)back to top |