prot_M-pyrifera_M_contig72503.17234.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72503.17234.1
Unique Nameprot_M-pyrifera_M_contig72503.17234.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length53
Homology
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: D7FM89_ECTSI (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM89_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 6.580e-25
Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            +GS  ELDKLT+DNKDKL+VVDYSTTWCGPCKM+LPKFE+LA +Y+DA+F+KV
Sbjct:   20 IGSFAELDKLTSDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKV 72          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A6H5K2L8_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.880e-24
Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            +GS  ELDKLT+DNKDKL+VVDYSTTWCGPCKM+LPKFE+LA +Y+DA+F+KV
Sbjct:   59 IGSFAELDKLTSDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKV 111          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A8K0ED01_BRALA (TXN protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0ED01_BRALA)

HSP 1 Score: 77.0 bits (188), Expect = 4.600e-17
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    6 ELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            E D L ADNKDKLIVVD++ +WCGPCKM+ P FE+LA E++D IF+KV
Sbjct:   10 EFDALVADNKDKLIVVDFTASWCGPCKMIGPVFEKLAEEHSDVIFVKV 57          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: C3YTF6_BRAFL (Thioredoxin n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YTF6_BRAFL)

HSP 1 Score: 75.5 bits (184), Expect = 1.820e-16
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    6 ELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            + D L ADNKDKLIVVD++ +WCGPCKM+ P FE+LA + TD IF+KV
Sbjct:    9 DFDALLADNKDKLIVVDFTASWCGPCKMIAPVFEKLAEDNTDVIFVKV 56          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A4D9DEX6_9STRA (Thioredoxin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEX6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.380e-16
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    3 SPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            SPD+ DKL     +KL++VDYSTTWCGPCKM+ PKF+E++S + DA+F+KV
Sbjct:   48 SPDDFDKLVTGAGEKLLIVDYSTTWCGPCKMMAPKFDEMSSRF-DAVFVKV 97          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A7S1ZG46_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG46_TRICV)

HSP 1 Score: 75.5 bits (184), Expect = 5.770e-16
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            + SPD  D       D L+VVDYSTTWCGPCK++ PKFEE + +Y+DA+F+KV
Sbjct:   47 IDSPDAFDNTIKSAGDALVVVDYSTTWCGPCKVIAPKFEEFSEKYSDAVFLKV 99          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A6U0KDA1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KDA1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.350e-16
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            + SPD  DK        L+VVDYSTTWCGPCK++ PKF+EL+ +Y DA+F+KV
Sbjct:   48 IDSPDAFDKTIESAGGALVVVDYSTTWCGPCKVIAPKFDELSDQYADAVFLKV 100          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A6P5AJL9_BRABE (Thioredoxin n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AJL9_BRABE)

HSP 1 Score: 73.2 bits (178), Expect = 1.520e-15
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    6 ELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            + D L ADNKDKLIVVD++ +WCGPC+M+ P FE+LA E  D IF+KV
Sbjct:   10 DFDALLADNKDKLIVVDFTASWCGPCRMIAPVFEKLAEENPDVIFVKV 57          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: A0A6V2AAC3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AAC3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.690e-15
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            + S  + DK      D L+VVDYSTTWCGPCK++ PKF+EL+ +Y+DA+F+KV
Sbjct:   48 IDSEAKFDKTIESAGDSLVVVDYSTTWCGPCKVIAPKFDELSEQYSDAVFVKV 100          
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Match: B8BVB7_THAPS (Thioredoxin f n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVB7_THAPS)

HSP 1 Score: 73.9 bits (180), Expect = 1.970e-15
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIFIKV 53
            V S  E D   +   DKL+V+DYSTTWCGPCK++ PKF+EL+ +Y D++FIKV
Sbjct:   41 VNSEAEFDAKVSGAGDKLVVIDYSTTWCGPCKVIAPKFDELSDQYPDSVFIKV 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72503.17234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM89_ECTSI6.580e-2577.36Flagellar outer arm dynein 14 kDa light chain LC5 ... [more]
A0A6H5K2L8_9PHAE1.880e-2477.36Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A8K0ED01_BRALA4.600e-1766.67TXN protein n=1 Tax=Branchiostoma lanceolatum TaxI... [more]
C3YTF6_BRAFL1.820e-1664.58Thioredoxin n=1 Tax=Branchiostoma floridae TaxID=7... [more]
A0A4D9DEX6_9STRA5.380e-1660.78Thioredoxin domain-containing protein n=3 Tax=Mono... [more]
A0A7S1ZG46_TRICV5.770e-1656.60Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U0KDA1_9STRA8.350e-1656.60Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6P5AJL9_BRABE1.520e-1562.50Thioredoxin n=3 Tax=Branchiostoma TaxID=7737 RepID... [more]
A0A6V2AAC3_9STRA1.690e-1554.72Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8BVB7_THAPS1.970e-1556.60Thioredoxin f n=1 Tax=Thalassiosira pseudonana Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..53
e-value: 2.4E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 2..53
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 2..53
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 14..52
e-value: 1.1E-11
score: 44.6
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 20..38
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72503contigM-pyrifera_M_contig72503:134..292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72503.17234.1mRNA_M-pyrifera_M_contig72503.17234.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72503 134..292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72503.17234.1 ID=prot_M-pyrifera_M_contig72503.17234.1|Name=mRNA_M-pyrifera_M_contig72503.17234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
VGSPDELDKLTADNKDKLIVVDYSTTWCGPCKMVLPKFEELASEYTDAIF
IKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf