prot_M-pyrifera_M_contig72433.17222.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72433.17222.1
Unique Nameprot_M-pyrifera_M_contig72433.17222.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A139SNL0_9GAMM (DNA helicase n=2 Tax=Ventosimonas gracilis TaxID=1680762 RepID=A0A139SNL0_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 1.390e-8
Identity = 39/113 (34.51%), Postives = 54/113 (47.79%), Query Frame = 0
Query:    1 MAVLVGNGNARKHVPAVAGRHGVPFADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDHVYAGPGADDET---KRRLVYVGMTRATDHLMLALHGSGQIIDDLLA 110
            MAVL   G A  ++     +  +P   L +   RK      D + + TI   KGLEF  V L+    +  G   DD       RL+YVGMTRAT+ L+L+ H   ++   LLA
Sbjct:    1 MAVLYPGGEAGHNMEQALQQAAIPCIWLKDSKTRKDYRVDEDKIPIMTIHSSKGLEFSTVVLLDASFI-PGKEIDDAALTAAMRLLYVGMTRATERLLLSFHRDNELAKALLA 112          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A7K2B2T0_9ACTN (DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2B2T0_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 1.580e-7
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    1 MAVLVGNGNARKHVPAVAGRHGVPFADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDHVYAGPGAD----DETKRRLVYVGMTRATDHLMLALHGSG 102
            +A+L G+   R  + A      V   DL+++ A     E    VRVAT+Q LKGLEF  V +   +HV+     D    D+ +RRL+YV MTRAT+ L +   G G
Sbjct:  482 IAILTGSAELRTQI-ARRVPDAVNAKDLNDRGA-----EPRGAVRVATLQLLKGLEFRHVIVGGANHVWVTDDTDENAQDDQRRRLLYVAMTRATETLTVTYSGEG 581          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: UPI0008347F52 (NERD domain-containing protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008347F52)

HSP 1 Score: 55.8 bits (133), Expect = 1.020e-6
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0
Query:    1 MAVLVGNGNARKHVPAVAGRHGVPFADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDHVYAGPGADDET--KRRLVYVGMTRATDHLMLALHGSGQIIDDLLAA 111
            MAVL     +   + +      +P   L+ +  R +     + V+V T+   KGLEF  V +  ++ +   P  D++   + R++YVGMTRA DHL++  H  G  +D + +A
Sbjct:  487 MAVLYRRNKSADAIASALDEAAIPHEALASRRKRSAFDANTETVKVLTMHSSKGLEFRAVAIPGINRM---PLKDEDPTEEARVLYVGMTRAMDHLLITGHDKGGFLDQIRSA 596          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A385Z769_9PSED (DNA helicase n=2 Tax=Pseudomonas cavernae TaxID=2320867 RepID=A0A385Z769_9PSED)

HSP 1 Score: 55.8 bits (133), Expect = 1.020e-6
Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 0
Query:   22 GVPFADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERV---YLVSLDHVYAGPGADDETKRRLVYVGMTRATDHLMLALHGSGQIIDDLLAAA 112
            G+P   ++ K    ++    D V+V T+   KGLEF+ V   ++  L H  A   AD+    RL+YVGMTRATDHL+L    S      L   A
Sbjct:  505 GIPVEQVNSKGNNTALDPGADSVKVVTLHSSKGLEFDSVAIPFIGRLPHAKAKSVADEA---RLLYVGMTRATDHLLLTASQSSPFTQRLREVA 595          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A6N9A033_9ACTN (DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N9A033_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 1.020e-6
Identity = 38/114 (33.33%), Postives = 61/114 (53.51%), Query Frame = 0
Query:    1 MAVLVGNGNARKHV-PAVAGRHGVPFADLSEKSARKSIGEIGDVV------RVATIQKLKGLEFERVYLVSLDHVYAGPGADDE---TKRRLVYVGMTRATDHLMLALHGSGQI 104
            +A+L G  + ++ +   +A R G+P+  +  K  ++        +      RV+TIQ +KGLEF RV +  ++   A    ++E     +RLVYVGMTRA D LM+   G G+I
Sbjct:  489 IAILYGTRDLQEKLYHELARRQGLPYFHIQHKDKKEPQDRRDTALQKNYHLRVSTIQGIKGLEFSRVLIGGVNQARAHDIPEEEQVEAVKRLVYVGMTRAMDELMITYSGPGKI 602          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A3B1BA54_9ZZZZ (DNA helicase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1BA54_9ZZZZ)

HSP 1 Score: 54.7 bits (130), Expect = 2.200e-6
Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 0
Query:    1 MAVLVGNGNARKHVPAVAGRHGVPFADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDHVYAGPGADDETKRRLVYVGMTRATDHLMLALHGSGQIIDDLLAAA 112
            MAVL  +G+    + A   +  +P+A L  K  + +     D V V ++   KGLEF RV ++ +D V      + E   RL+YVGMTRA + L++   G  +    +L  A
Sbjct:  193 MAVLYIDGSGGHAISAQLKKAAIPYAWLGSKKYKSAYNPDLDQVTVLSVYSSKGLEFSRVIMLGIDQVDDSED-NQEDGARLLYVGMTRAQECLLVTSSGMNKYTQRVLEVA 303          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: UPI001D0D73E9 (ATP-dependent DNA helicase UvrD2 n=1 Tax=Nocardioides malaquae TaxID=2773426 RepID=UPI001D0D73E9)

HSP 1 Score: 54.7 bits (130), Expect = 2.620e-6
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   25 FADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDH-----VYAGPGADDETKRRLVYVGMTRATDHLMLA 97
            F D  ++ A +    + + V +AT+   KGLE++ V+LV L       VYA   A+ E +RRL YVG+TRA +HL L+
Sbjct:  456 FVDELDRRASEQHAPVAEGVTLATLHTAKGLEWDAVFLVGLVEGTLPIVYAKTPAEVEEERRLFYVGLTRAREHLALS 533          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: UPI000C233271 (NERD domain-containing protein n=1 Tax=Bacillus xiapuensis TaxID=2014075 RepID=UPI000C233271)

HSP 1 Score: 54.3 bits (129), Expect = 3.550e-6
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   21 HGVPFADLSEKSARKSIGEIGD-VVRVATIQKLKGLEFERVYLVSLDHVYAGPGADDETKRRLVYVGMTRATDHLMLALHGSGQ 103
            H +P+  ++E    K I    D  V++ T    KGL+F+ V++V+ D+       D + +  L+Y+GMTRAT++LM++  G  +
Sbjct:  530 HQIPYTWVTESQEAKRIYRKDDGSVKIFTFDSSKGLDFQAVFIVNADNTPFALEEDKDREAALMYIGMTRATEYLMISYSGDSE 613          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A4V5TK54_9ACTN (DNA helicase n=3 Tax=Nocardioides TaxID=1839 RepID=A0A4V5TK54_9ACTN)

HSP 1 Score: 54.3 bits (129), Expect = 3.580e-6
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   25 FADLSEKSARKSIGEIGDVVRVATIQKLKGLEFERVYLVSLDH-----VYAGPGADDETKRRLVYVGMTRATDHLMLA 97
            F D  ++ A +    + + V +AT+   KGLE++ V+LV L       +YA   A+ E +RRL YVG+TRA +HL L+
Sbjct:  462 FVDELDRRAAEQHAPVAEGVTLATLHTAKGLEWDAVFLVGLVEGTMPIIYAKTPAEVEEERRLFYVGLTRAREHLSLS 539          
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Match: A0A517ZY61_9PLAN (DNA helicase n=5 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZY61_9PLAN)

HSP 1 Score: 53.9 bits (128), Expect = 4.860e-6
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:   42 DVVRVATIQKLKGLEFERVYLVSLDH-------VYAGPGADDETKRRLVYVGMTRATDHLMLA 97
            D V++ T+   KGLEF RVYLV L+           G  A+ E +RRL YVG+TRA DHL L+
Sbjct:  556 DAVKLMTLHSAKGLEFPRVYLVGLEEGILPHKRSVEGTEANIEEERRLAYVGITRACDHLTLS 618          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72433.17222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A139SNL0_9GAMM1.390e-834.51DNA helicase n=2 Tax=Ventosimonas gracilis TaxID=1... [more]
A0A7K2B2T0_9ACTN1.580e-737.74DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxI... [more]
UPI0008347F521.020e-629.20NERD domain-containing protein n=1 Tax=Halofilum o... [more]
A0A385Z769_9PSED1.020e-637.23DNA helicase n=2 Tax=Pseudomonas cavernae TaxID=23... [more]
A0A6N9A033_9ACTN1.020e-633.33DNA helicase n=1 Tax=Acidimicrobiia bacterium TaxI... [more]
A0A3B1BA54_9ZZZZ2.200e-632.14DNA helicase (Fragment) n=1 Tax=hydrothermal vent ... [more]
UPI001D0D73E92.620e-639.74ATP-dependent DNA helicase UvrD2 n=1 Tax=Nocardioi... [more]
UPI000C2332713.550e-632.14NERD domain-containing protein n=1 Tax=Bacillus xi... [more]
A0A4V5TK54_9ACTN3.580e-638.46DNA helicase n=3 Tax=Nocardioides TaxID=1839 RepID... [more]
A0A517ZY61_9PLAN4.860e-647.62DNA helicase n=5 Tax=Symmachiella TaxID=2795780 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..106
e-value: 1.2E-15
score: 59.7
IPR027785UvrD-like helicase C-terminal domainPFAMPF13538UvrD_C_2coord: 45..96
e-value: 1.2E-11
score: 44.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 35..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72433contigM-pyrifera_M_contig72433:748..1083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72433.17222.1mRNA_M-pyrifera_M_contig72433.17222.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72433 748..1110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72433.17222.1 ID=prot_M-pyrifera_M_contig72433.17222.1|Name=mRNA_M-pyrifera_M_contig72433.17222.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MAVLVGNGNARKHVPAVAGRHGVPFADLSEKSARKSIGEIGDVVRVATIQ
KLKGLEFERVYLVSLDHVYAGPGADDETKRRLVYVGMTRATDHLMLALHG
SGQIIDDLLAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027785UvrD-like_helicase_C
IPR027417P-loop_NTPase