prot_M-pyrifera_M_contig7243.17220.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7243.17220.1
Unique Nameprot_M-pyrifera_M_contig7243.17220.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length680
Homology
BLAST of mRNA_M-pyrifera_M_contig7243.17220.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 2.050e-196
Identity = 358/706 (50.71%), Postives = 407/706 (57.65%), Query Frame = 0
Query:    1 MWRDFSAHHAQRGDVTAIVWGSLGARAPVEHESAATAXXXXXXXXXXXXXXXXXXXXGATSDAGGDACTPPTSRWKVDAEALTRSRRAGTPFVQQCDLIFPLADRSVDGCGAVCDDGAENVLAEATAERQAEAFVTRALGSSFYYRVRGELCDLLREPFLSSCVLKGSFSALALNAPSDQGNSFAILPGGVLVLSLDRESFQAREQA-TLGLPGEAAPTRPKGRSKRAGAGAGSTGGSVGVLGGGAGGPDRYVSVFDLSSKAFRPGKPLHDRVLACLGGGRRGHKEGDGNDDADASFASARGAAKKEGVEGGESFAFDGREGARGQGERTGKQQRQQPKGQXXXXXXXXXXXXXXXQGGELEEGPHER------CREVTFPPHFAVEKVDLVPDICFFREACCPDLDLVGQGLATAAPLPPTKPRKR--------------------DGPEPGAATPEQPSISMNDSQSPTKPAASARQPLDQPXXXXXXXXSSTQCLLALDLFEWLGAVSCGLDAQLRREPSPPEPYLSEFETPRHLQYRRHRTVCRARLRGFLSPVAVGRCVKAAGEAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQTDGCSWGSVTVWPFRDAPRAYAGADAPCGGGERTRRKXXXXXXXXXDGGRSGVVGRVAREWPVGGHGIYTVVACPGETAVAHVSARCPGPGW 679
            MW+DFSAH+ QRGDVTA+VWG+ GAR P   ES AT                                 P ++   VDAEALTR RRA TPF+QQCDL+FPL D+  +  G    D  E        E +A+AFV RALG +FYYR RG L  LLRE FL S VLKG FSALALNAPSD GNSFAILPGGVLVLSLDRESFQA      + LPGEAA TRP G+ KRAGAGAGSTGGSVGVLGG AGGPDRYVS  DLS+K+FRPGKPLHDRVL+CL   R G  +     D    +  + G  +  G EGGE    +    + G  E +G    Q P+G                  GE  EG  E       CR++TFPP F+ E+VDL PDI FFREACCPDLD VGQGLA  AP    + R++                    DG + G +          D + P  P   A QP             S +CLL LD+FEWLGAVSCGLDA +RR PSPPEPYLS+FETPRHL+YRR R VCRARLRGFL PVAV R V AAG AAA                                        Q+ DGCSWG+VT WPFRDAPRAY GADAPC GG+R++R            G  G   R A+EWPVGGHG+YTVVACPGETAVA VSA+CPGPGW
Sbjct:    1 MWQDFSAHNTQRGDVTAVVWGAPGAR-PATGESTATVR-------------------------------PSSAAGAVDAEALTRGRRADTPFIQQCDLVFPLPDQDGESDGHDHGDTQERQQKRLEMEERAKAFVVRALGKTFYYRARGPLSVLLRERFLDSYVLKGGFSALALNAPSDHGNSFAILPGGVLVLSLDRESFQASISGFRICLPGEAAATRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLSSCRWGSGDDGAAVDMVVHWCGSGGVGQGSG-EGGELAEAE----SSGTSEASG----QAPEG-----CGQGAAAVGRRPKGECAEGKQEGQQSQQCCRDITFPPGFSAERVDLTPDIRFFREACCPDLDFVGQGLAATAPTTVQRARRKGRKGIEATAFNSTSTAENLVDGSDDGGSDDH-----FTDRRHPRLPPPVASQP------------ESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSKFETPRHLRYRRDRVVCRARLRGFLPPVAVSRFVDAAGSAAAGVAALASAEDSAADGRQHYESPQLLPVRRVVRDQGQ----QRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGARKGR------GGGGSEERCAKEWPVGGHGVYTVVACPGETAVAFVSAKCPGPGW 633          
BLAST of mRNA_M-pyrifera_M_contig7243.17220.1 vs. uniprot
Match: A0A835ZFG0_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.050e-11
Identity = 48/102 (47.06%), Postives = 57/102 (55.88%), Query Frame = 0
Query:  180 QGNSFAILPGGVLVLSLDRESFQAREQATLGLPGEAAPTRPKGRSKRAGAGAGSTGGSVGVLGGGAGGPDRYVSVFDLSSKAFRPGKPLHDRVLACLGGGRR 281
            +G +FA+LPGG LV SLDRE+FQ     TLGLP +A   RP   S+R G                   P RY    DL SK+FRPGKPLHDR++ CL  G R
Sbjct:   18 RGATFAVLPGGKLVYSLDREAFQ-----TLGLPAKA--VRPASTSRRPGGDK----------------PRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGAR 96          
BLAST of mRNA_M-pyrifera_M_contig7243.17220.1 vs. uniprot
Match: A0A8C4PW73_EPTBU (Ribonuclease P/MRP 40 subunit n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PW73_EPTBU)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-7
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = 0
Query:  144 YYRVRG-ELCDLLREPFLSSCVLKGSFSALALNAPSDQGNSFAILPGGVLVLSLDRESFQAREQATLGLPGEAAPTRPKGRSKRAGAGAGSTGGSVGVLGGGAGGPDRYVSVFDLSSKAFRPGKPLHDRVLACLG 277
            YY VRG  L  LL+E F+   V +GS  AL+ +   DQ +SFA+LP G L+LSL +++++     TLGL G+  P+   GR                        P  YV   DL+S  F+ GK  ++RV+  LG
Sbjct:   63 YYLVRGLPLTALLQEDFIERFVRRGSVCALSYDTRIDQDDSFALLPPGSLLLSLQKDTYE-----TLGLQGK--PSVYAGRK-----------------------PLHYVVNIDLTSPTFKSGKKNYERVIWALG 167          
BLAST of mRNA_M-pyrifera_M_contig7243.17220.1 vs. uniprot
Match: W5N107_LEPOC (Ribonuclease P/MRP subunit p40 n=3 Tax=Lepisosteidae TaxID=7915 RepID=W5N107_LEPOC)

HSP 1 Score: 57.0 bits (136), Expect = 6.300e-5
Identity = 43/134 (32.09%), Postives = 60/134 (44.78%), Query Frame = 0
Query:  144 YYRVRG-ELCDLLREPFLSSCVLKGSFSALALNAPSDQGNSFAILPGGVLVLSLDRESFQAREQATLGLPGEAAPTRPKGRSKRAGAGAGSTGGSVGVLGGGAGGPDRYVSVFDLSSKAFRPGKPLHDRVLACL 276
            YY V+   +  +L E FL   V  GS  AL+     DQ N+FA+LP G LVLSLD+++++      LGL G+ +    K                          P RYV   DL+ K+  PG   + RV+  L
Sbjct:   66 YYLVKNFPIYKILEEKFLEKQVKAGSLCALSYKTRIDQDNTFALLPTGKLVLSLDKDTYE-----DLGLEGQPSQYNHKV-------------------------PVRYVITVDLADKSLAPGTNKYKRVMWAL 169          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7243.17220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE2.050e-19650.71Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZFG0_9STRA1.050e-1147.06Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A8C4PW73_EPTBU2.770e-735.56Ribonuclease P/MRP 40 subunit n=2 Tax=Eptatretus b... [more]
W5N107_LEPOC6.300e-532.09Ribonuclease P/MRP subunit p40 n=3 Tax=Lepisosteid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013893Ribonuclease P, Rpp40PFAMPF08584Ribonuc_P_40coord: 472..607
e-value: 6.6E-9
score: 35.5
coord: 153..276
e-value: 1.9E-11
score: 43.8
IPR013893Ribonuclease P, Rpp40PANTHERPTHR15396FAMILY NOT NAMEDcoord: 89..608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7243contigM-pyrifera_M_contig7243:7306..12128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7243.17220.1mRNA_M-pyrifera_M_contig7243.17220.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7243 7306..12128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7243.17220.1 ID=prot_M-pyrifera_M_contig7243.17220.1|Name=mRNA_M-pyrifera_M_contig7243.17220.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=680bp
MWRDFSAHHAQRGDVTAIVWGSLGARAPVEHESAATASAAAASSPPSGTA
AAAATASGATSDAGGDACTPPTSRWKVDAEALTRSRRAGTPFVQQCDLIF
PLADRSVDGCGAVCDDGAENVLAEATAERQAEAFVTRALGSSFYYRVRGE
LCDLLREPFLSSCVLKGSFSALALNAPSDQGNSFAILPGGVLVLSLDRES
FQAREQATLGLPGEAAPTRPKGRSKRAGAGAGSTGGSVGVLGGGAGGPDR
YVSVFDLSSKAFRPGKPLHDRVLACLGGGRRGHKEGDGNDDADASFASAR
GAAKKEGVEGGESFAFDGREGARGQGERTGKQQRQQPKGQRRQQEGEGEE
EEEEEQGGELEEGPHERCREVTFPPHFAVEKVDLVPDICFFREACCPDLD
LVGQGLATAAPLPPTKPRKRDGPEPGAATPEQPSISMNDSQSPTKPAASA
RQPLDQPPPLPPPPPSSTQCLLALDLFEWLGAVSCGLDAQLRREPSPPEP
YLSEFETPRHLQYRRHRTVCRARLRGFLSPVAVGRCVKAAGEAAATATAA
AAAAAATVAVTAAGAEGHYYFGSGEGRSASGQGDGQQTDGCSWGSVTVWP
FRDAPRAYAGADAPCGGGERTRRKSGGASGGGGDGGRSGVVGRVAREWPV
GGHGIYTVVACPGETAVAHVSARCPGPGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013893RNase_P_Rpp40