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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 954 |
Cds size | 951 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816619.3202-UTR-M-pyrifera_M_contig7227:11321..11324 | 1622816619.3202-UTR-M-pyrifera_M_contig7227:11321..11324 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7227 11322..11324 + |
1692278080.7713106-UTR-M-pyrifera_M_contig7227:11321..11324 | 1692278080.7713106-UTR-M-pyrifera_M_contig7227:11321..11324 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig7227 11322..11324 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816619.3343513-CDS-M-pyrifera_M_contig7227:11324..12275 | 1622816619.3343513-CDS-M-pyrifera_M_contig7227:11324..12275 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7227 11325..12275 + |
1692278080.788267-CDS-M-pyrifera_M_contig7227:11324..12275 | 1692278080.788267-CDS-M-pyrifera_M_contig7227:11324..12275 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig7227 11325..12275 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7227.17187.1 >prot_M-pyrifera_M_contig7227.17187.1 ID=prot_M-pyrifera_M_contig7227.17187.1|Name=mRNA_M-pyrifera_M_contig7227.17187.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=317bp
MNTDRLTFGDQYDRSIEDVQWPAGLKQVTFGRLFNKPLDRVKWPSTLVEI VFGFNFNAPVVGMPLPAGLRKVRFGCGFNQALEGVRWPSSLRDISFGNGF NKPIRGVVWPEGLKTLTLGWDFNQAVEGVVWPRGMEELIFSGRFNQPVEG AVFPASLQRLDFGTTFDRPVSRVSWPTSLKRLTFGCLYNHTLERTRLPMG LEMLTLGCSWNQPLASVALPAGLTSLSLGHDFDQPLDNVRWPAGLRELSI GDSFDRSLNGVEWPATLKTVTIGDAFDQPLEAVEWPPALEYLSLGARFSQ SLEGTLWPARLTTLMFG back to topmRNA from alignment at M-pyrifera_M_contig7227:11322..12275+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig7227.17187.1 ID=mRNA_M-pyrifera_M_contig7227.17187.1|Name=mRNA_M-pyrifera_M_contig7227.17187.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig7227:11322..12275+ (Macrocystis pyrifera P11B4 male) CCCATGAACACCGACCGCCTCACGTTTGGAGACCAGTACGACCGATCTAT
CGAGGACGTGCAGTGGCCGGCGGGCCTGAAGCAGGTCACTTTCGGCAGGC
TCTTCAACAAACCTCTGGACCGCGTGAAGTGGCCGTCGACCCTGGTTGAG
ATTGTTTTCGGGTTCAACTTCAACGCGCCCGTTGTTGGCATGCCGTTGCC
CGCCGGGCTGCGGAAGGTTCGGTTCGGGTGCGGTTTTAACCAGGCGCTGG
AAGGAGTGCGGTGGCCTTCTAGCCTGCGGGATATCTCCTTTGGCAACGGG
TTCAACAAGCCCATCCGCGGAGTCGTCTGGCCCGAGGGACTCAAGACGCT
GACGCTGGGCTGGGATTTCAATCAAGCCGTTGAAGGCGTTGTGTGGCCGA
GGGGCATGGAGGAGTTGATATTCAGCGGGCGATTTAATCAGCCCGTAGAG
GGAGCCGTGTTCCCGGCCAGTCTCCAACGCCTGGATTTCGGCACTACGTT
CGATCGTCCAGTCAGTCGAGTTTCGTGGCCCACAAGTCTTAAGCGGCTCA
CCTTCGGCTGCCTCTACAACCACACGCTGGAGCGCACGCGACTCCCCATG
GGGCTTGAGATGTTGACGCTCGGTTGCAGCTGGAACCAACCCCTTGCCTC
GGTGGCGCTGCCTGCTGGTCTGACCAGCTTGTCTCTGGGGCACGATTTCG
ACCAACCGTTGGACAATGTCAGGTGGCCTGCGGGGCTCCGCGAGCTCTCT
ATCGGGGACTCTTTTGACAGGTCTCTGAATGGCGTGGAGTGGCCGGCTAC
TTTGAAGACCGTCACTATTGGTGACGCGTTTGATCAGCCTCTTGAGGCGG
TAGAGTGGCCGCCGGCTTTGGAGTACCTCTCGTTGGGCGCGAGGTTCTCC
CAGTCGCTCGAAGGCACGCTGTGGCCGGCGCGGTTGACGACGTTGATGTT
CGGT back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig7227:11322..12275+ >mRNA_M-pyrifera_M_contig7227.17187.1 ID=mRNA_M-pyrifera_M_contig7227.17187.1|Name=mRNA_M-pyrifera_M_contig7227.17187.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1902bp|location=Sequence derived from alignment at M-pyrifera_M_contig7227:11322..12275+ (Macrocystis pyrifera P11B4 male) ATGAACACCGACCGCCTCACGTTTGGAGACCAGTACGACCGATCTATCGA GGACGTGCAGTGGCCGGCGGGCCTGAAGCAGGTCACTTTCGGCAGGCTCT TCAACAAACCTCTGGACCGCGTGAAGTGGCCGTCGACCCTGGTTGAGATT GTTTTCGGGTTCAACTTCAACGCGCCCGTTGTTGGCATGCCGTTGCCCGC CGGGCTGCGGAAGGTTCGGTTCGGGTGCGGTTTTAACCAGGCGCTGGAAG GAGTGCGGTGGCCTTCTAGCCTGCGGGATATCTCCTTTGGCAACGGGTTC AACAAGCCCATCCGCGGAGTCGTCTGGCCCGAGGGACTCAAGACGCTGAC GCTGGGCTGGGATTTCAATCAAGCCGTTGAAGGCGTTGTGTGGCCGAGGG GCATGGAGGAGTTGATATTCAGCGGGCGATTTAATCAGCCCGTAGAGGGA GCCGTGTTCCCGGCCAGTCTCCAACGCCTGGATTTCGGCACTACGTTCGA TCGTCCAGTCAGTCGAGTTTCGTGGCCCACAAGTCTTAAGCGGCTCACCT TCGGCTGCCTCTACAACCACACGCTGGAGCGCACGCGACTCCCCATGGGG CTTGAGATGTTGACGCTCGGTTGCAGCTGGAACCAACCCCTTGCCTCGGT GGCGCTGCCTGCTGGTCTGACCAGCTTGTCTCTGGGGCACGATTTCGACC AACCGTTGGACAATGTCAGGTGGCCTGCGGGGCTCCGCGAGCTCTCTATC GGGGACTCTTTTGACAGGTCTCTGAATGGCGTGGAGTGGCCGGCTACTTT GAAGACCGTCACTATTGGTGACGCGTTTGATCAGCCTCTTGAGGCGGTAG AGTGGCCGCCGGCTTTGGAGTACCTCTCGTTGGGCGCGAGGTTCTCCCAG TCGCTCGAAGGCACGCTGTGGCCGGCGCGGTTGACGACGTTGATGTTCGG TATGAACACCGACCGCCTCACGTTTGGAGACCAGTACGACCGATCTATCG AGGACGTGCAGTGGCCGGCGGGCCTGAAGCAGGTCACTTTCGGCAGGCTC TTCAACAAACCTCTGGACCGCGTGAAGTGGCCGTCGACCCTGGTTGAGAT TGTTTTCGGGTTCAACTTCAACGCGCCCGTTGTTGGCATGCCGTTGCCCG CCGGGCTGCGGAAGGTTCGGTTCGGGTGCGGTTTTAACCAGGCGCTGGAA GGAGTGCGGTGGCCTTCTAGCCTGCGGGATATCTCCTTTGGCAACGGGTT CAACAAGCCCATCCGCGGAGTCGTCTGGCCCGAGGGACTCAAGACGCTGA CGCTGGGCTGGGATTTCAATCAAGCCGTTGAAGGCGTTGTGTGGCCGAGG GGCATGGAGGAGTTGATATTCAGCGGGCGATTTAATCAGCCCGTAGAGGG AGCCGTGTTCCCGGCCAGTCTCCAACGCCTGGATTTCGGCACTACGTTCG ATCGTCCAGTCAGTCGAGTTTCGTGGCCCACAAGTCTTAAGCGGCTCACC TTCGGCTGCCTCTACAACCACACGCTGGAGCGCACGCGACTCCCCATGGG GCTTGAGATGTTGACGCTCGGTTGCAGCTGGAACCAACCCCTTGCCTCGG TGGCGCTGCCTGCTGGTCTGACCAGCTTGTCTCTGGGGCACGATTTCGAC CAACCGTTGGACAATGTCAGGTGGCCTGCGGGGCTCCGCGAGCTCTCTAT CGGGGACTCTTTTGACAGGTCTCTGAATGGCGTGGAGTGGCCGGCTACTT TGAAGACCGTCACTATTGGTGACGCGTTTGATCAGCCTCTTGAGGCGGTA GAGTGGCCGCCGGCTTTGGAGTACCTCTCGTTGGGCGCGAGGTTCTCCCA GTCGCTCGAAGGCACGCTGTGGCCGGCGCGGTTGACGACGTTGATGTTCG GT back to top
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