mRNA_M-pyrifera_M_contig71623.17074.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71623.17074.1
Unique NamemRNA_M-pyrifera_M_contig71623.17074.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A5A8C0P5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C0P5_CAFRO)

HSP 1 Score: 285 bits (729), Expect = 5.620e-89
Identity = 146/271 (53.87%), Postives = 190/271 (70.11%), Query Frame = 1
Query:   16 GLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHRPAGIISSDRARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDA-DKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            G P  AG  V LVH  TNQ LAA     +AT FG EL ++A  H+ +GI++ DR RPA  PN W   L+ DAAAA D RD RP+TA+A++++VR AL  RGT+GIRA+G+ FRI+DD+ DGRLDREDLKWGLFD G+RLS+EEF ++LDA D SGDGLV YDEFL AVR P++E R   +E AF KLD DGSGE++  ++A  F       V++G +T  +A+R F  QWD  D DG VT +E+ +Y++DVSAS+D D YF  +++  W L
Sbjct:  256 GSPVPAGAEVCLVHCQTNQALAASETAPIATAFGRELPLYARTHKSSGIVTRDRPRPAQAPNRWAILLSEDAAAAEDRRDFRPLTADAIVDKVRLALRERGTYGIRALGKAFRILDDRRDGRLDREDLKWGLFDFGLRLSDEEFEMLLDAVDTSGDGLVSYDEFLLAVRGPMNERRRAVVEEAFRKLDRDGSGEVTAEDLAGVFSAKFDEGVRAGTRTEAQALREFLSQWDTLDADGRVTLDEFCRYYDDVSASVDSDDYFETMVRKCWRL 526          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A7S1CF03_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CF03_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.500e-76
Identity = 132/276 (47.83%), Postives = 180/276 (65.22%), Query Frame = 1
Query:   16 GLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHRPAGIISSDRARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDA-DKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL-GEEG 837
            G P  A  AV LVH +TNQ LAA L DA+ TDFG EL VH F ++  G  +     PA  PN W    A+   AA+D RDL+P++ E L++++R  +  RG+  IR +GR FRIMDD+ DG+LDRED KWGL D GV L ++EF +VLD FD  GDG V   EFL A+R  ++  R  ++  A+ +LD DGSGE++L+++   +D S  PEV+SG  T EEAV  F  QWD  +KDG VT  E++ Y++D+SASID+D Y+  +++ AW + G EG
Sbjct:  225 GTPVPANAAVALVHCTTNQRLAASLADAMPTDFGDELGVHCFTYKGTGRKAPGAPLPAAIPNRWTILTATTREAAIDNRDLKPLSPEVLLQKIREVILKRGSHSIRGLGRAFRIMDDRRDGKLDREDFKWGLHDYGVHLKDDEFDMVLDFFDRDGDGNVSMTEFLRALRGEMNARREGFVREAYRRLDKDGSGEVTLSDLVRVYDTSFHPEVKSGRITHEEAVTEFMSQWDTLEKDGVVTYAEFLDYYKDLSASIDDDDYWELMMRNAWHISGGEG 500          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A812MKX6_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MKX6_9DINO)

HSP 1 Score: 249 bits (635), Expect = 4.350e-75
Identity = 132/272 (48.53%), Postives = 178/272 (65.44%), Query Frame = 1
Query:   16 GLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHRPAGIISSDRARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAAR-GTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDA-DKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            G P   G AVQ++H +TN+PLAA L   + TDFG EL  HAF + P  I SS + RPA   N W    AS   AAVD+R    +T   +M++V+A L  R G  GIR +GR+FRI+DD GDG LDRED KWGL+D GVR+S++EF ++LDAFD +GDG++ +DEFL A+R  +S  RL  ++ AF KLD  G G+++LA++   +D S   EV  G  T EE +  F  QWD  D+DG V+ EE+ +Y+ DVSAS+D D YF  +++ AW L
Sbjct:  252 GTPVPVGSAVQVMHRATNRPLAASLDLQMPTDFGNELVAHAFKYVPNTITSSAKGRPAQSQNRWVVVTASTPEAAVDDRHFVELTPAMIMDKVKAVLLERNGVHGIRGLGRMFRIIDDGGDGGLDREDFKWGLYDYGVRISDQEFTMLLDAFDTNGDGVISFDEFLVALRGDMSPARLAVVQEAFEKLDVTGDGKVTLADLEKLYDASHHQEVLQGKMTQEEVLSDFLSQWDTIDQDGVVSLEEFQRYYRDVSASVDTDEYFEQMVRNAWRL 523          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A7S0JR53_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JR53_CAFRO)

HSP 1 Score: 219 bits (559), Expect = 6.370e-67
Identity = 112/188 (59.57%), Postives = 138/188 (73.40%), Query Frame = 1
Query:   16 GLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHRPAGIISSDRARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLD 579
            G P  AG  V LVH  TNQ LAA     +AT FG EL ++A  H+ +GI++ DR RPA  PN W   L+ DAAAA D RD RP+TA+A++++VR AL  RGT+GIRA+G+ FRI+DD+ DGRLDREDLKWGLFD G+RLS+EEF ++LDA D SGDGLV YDEFL AVR P++E R   +E AF KLD
Sbjct:  123 GSPVPAGAEVCLVHCQTNQALAASETAPIATAFGRELPLYARTHKSSGIVTRDRPRPAQAPNRWAILLSEDAAAAEDRRDFRPLTADAIVDKVRLALRERGTYGIRALGKAFRILDDRRDGRLDREDLKWGLFDFGLRLSDEEFEMLLDAVDTSGDGLVSYDEFLLAVRGPMNERRRAVVEEAFRKLD 310          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A7S2XX41_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX41_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.030e-57
Identity = 115/294 (39.12%), Postives = 167/294 (56.80%), Query Frame = 1
Query:    1 RFEKAGLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFA----HRPAGIISSDRARPA--------LPPNLWRFRLASDAAAAVDERDL-RPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDADK-DGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL-GEEG 837
            R   AGLP  A   V + H  T Q L ++   +   DFG E +V  F     H+   +++    R             N W    ++D   A D R+L +P TAE L+++V   + ARG   +R + R FRIMDD  D +LDREDLKWGL D GV L + +F  + D FD SGDGLV   EFL A+R  +++ RL     A+ +LD +G G ++ A++A+ +D S  P V SG+ TP+EA+ +F  QW+  + DG +T +EW +Y++D+SA ID+D YF  +I+ AW + G EG
Sbjct:  161 RLLSAGLPVPANSPVVIQHRGTGQRLCSEAKYSSRGDFGVEYEVSCFTKQTPHKQMALLAETEGRKTGQTLDRVENEENHWLIITSADPELARDNRNLPKPATAEVLIKKVLDIIRARGEGSVRGLRRSFRIMDDGRDQQLDREDLKWGLKDYGVHLDDNQFDTIFDYFDRSGDGLVSIKEFLVAIRGEMNQRRLDLAMLAYGQLDKNGDGTVTRADVASAYDVSQHPRVISGELTPDEAIDIFMSQWETQEADGVITPKEWEEYYQDISAEIDDDDYFELMIRNAWHISGGEG 454          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A1R2BPK7_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BPK7_9CILI)

HSP 1 Score: 184 bits (468), Expect = 1.880e-51
Identity = 103/288 (35.76%), Postives = 168/288 (58.33%), Query Frame = 1
Query:    1 RFEKAGLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAH---RPAGIISSDRARPA---LPP------NLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDADK-DGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            RFE  G+P  A   V + H  T Q L++   +    DFG + +V   ++   R    +SS++       +P       N+WR   +     A ++ ++   + E ++  V+  L  RG +GIR + ++F+ MDD G+  LD ED KWGL++ G+ L+E + + ++  FD +GDG V +DEFLT ++  L++ RL+ +  A+ KLD +G G+++L +IA  +D S  PEV++G  T E+  R F   WD +K DG VT +E+ +Y+ED+SASID D+YF  +I++AW L
Sbjct:  199 RFESQGMPVIANSDVVIKHNQTGQWLSSDQIN-YRNDFGLDYEVSCHSYLDTRKTQQLSSEKTGKITVDIPTRLQGLQNVWRIFTSERPECAEEKEEVLESSPEVVLNSVKKVLLERGAYGIRGLAKVFKNMDDNGNRLLDPEDFKWGLYNYGIYLNENDIKTLIKTFDRNGDGFVNFDEFLTTIKGKLNDNRLRLVALAYEKLDKNGDGQVTLDDIAKIYDASKHPEVRAGRLTEEQVFRQFITMWDTEKPDGIVTMKEFARYYEDISASIDSDNYFEAMIRSAWKL 485          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A1J4KY30_9EUKA (EF hand family protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KY30_9EUKA)

HSP 1 Score: 162 bits (410), Expect = 6.300e-46
Identity = 81/183 (44.26%), Postives = 118/183 (64.48%), Query Frame = 1
Query:  280 LMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLD-REDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDADKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            LMER+RA +  RG  G++ IGRLFRI DD  D  +D   +L   + D+GV L++ E   +    D++GDG + YDEFL  + PPLSEER+KWI +AF KLD DGSG +++A+I A  +P     V+ G  T  +      + +D D DGT+T++E++ Y+ ++S SID D YFA ++Q+AW L
Sbjct:   20 LMERIRARIVERGAIGVKGIGRLFRIADDNADNSIDLHNELPKLMNDIGVILNKTELTELERLLDKNGDGTISYDEFLYQMAPPLSEERIKWINKAFDKLDVDGSGLVNIADIQAVHNPKTSELVRMGKTTANQIFANLLQSYDQDGDGTITRDEFIDYYREISPSIDTDEYFATMMQSAWKL 202          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: J9FGJ2_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FGJ2_9SPIT)

HSP 1 Score: 169 bits (429), Expect = 1.340e-45
Identity = 105/283 (37.10%), Postives = 163/283 (57.60%), Query Frame = 1
Query:   25 GRAGDAVQLV---HASTNQPLAAQLGDAVATDFGPELQVHAFAH-----------RPAGIISSDR-ARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDAD-KDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            G A DA Q V   H ST+Q LA+   +    DFG E +V A+++              G ++ ++  +  L  N+W    ASD   A    ++   TA  L+  ++  L ARGT GIR +GR+FRI+D+ G+  LD  +L++GL D G+ + EE+ +++L++FD   +G+V +DEFL A+R  L+E RL  I++A+ KLD +  G + L +IA  +D S  P++  G + P+E    F + W+    DG VT +E+  YF DVSASID D YFA ++Q +W +
Sbjct:  222 GDAVDANQQVLIEHCSTSQYLASDKIN-YRNDFGMEYEVCAYSYSTNNKSQALNLEKVGKLTVEQPTKHQLDQNVWVICTASDPKFAEPIAEVPKYTAADLLAEIKQKLQARGTLGIRGLGRMFRILDNNGNRSLDIRELQYGLGDFGIAIDEEQGQVILNSFDRDRNGVVNFDEFLRAIRGDLNEYRLGLIKKAYQKLDENSDGTVKLDDIAKLYDVSKHPDIVGGRKKPQEVYLEFMKLWETQVADGIVTFDEFCDYFRDVSASIDRDDYFALMMQNSWKI 503          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A7S1NH27_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NH27_9EUGL)

HSP 1 Score: 169 bits (429), Expect = 2.690e-45
Identity = 98/281 (34.88%), Postives = 152/281 (54.09%), Query Frame = 1
Query:    1 RFEKAGLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHRPAGIISSDRARPALPPNLWRFRLASDAAAA------VDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDADKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            R E  G+P +A  A+ L H  TNQ L +Q  +    DFG E +V  +  R  G  +  ++ P    N W F  A            VD R L    A  ++ +V+A L ++G  G R + R+  I+DD G+  LD+ ++  GL   G+ L   E  IV+ +FD+ G+G +   EF+TA+R P+S+ R   +  A+  LD DGSG +   EI   +D    P+V SG +TP+  ++ F + W+ D D T+T +E+++Y+ED+SA ID D YF  +I+ AW +
Sbjct:  208 RIEMEGMPIKANSAILLHHPGTNQNLCSQTKNKYINDFGAEWEVCGYTDRGTG--TKKKSLPEQTSNHWGFIYAPPVEGCTGVQKIVDRRQLSKQEALVVINKVKAKLLSKGGNGFRGLSRVLNILDDNGNRALDKYEMDNGLQTYGIVLHPSEIDIVMGSFDKDGNGQISVREFMTALRGPMSDYRKGLVRMAYQMLDVDGSGVVQFDEIKQLYDVKKHPDVLSGTKTPDMVLQEFIKAWNKDGDTTITFDEFLEYYEDLSAPIDSDDYFELMIRNAWHI 486          
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Match: A0A078A8P8_STYLE (Calcyphosin-like protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A8P8_STYLE)

HSP 1 Score: 168 bits (425), Expect = 3.720e-45
Identity = 105/288 (36.46%), Postives = 162/288 (56.25%), Query Frame = 1
Query:    1 RFEKAGLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQV--HAFAHR---------PAGIISSD-RARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRAALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFRIVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEISLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDA-DKDGTVTKEEWVQYFEDVSASIDEDSYFAHVIQTAWGL 825
            RFEK G P  A   + + H ST+  LAA L   +  DFG E +V  ++FA +           G I+ D  ++     N++ F  A   A +V   +L   T E L+  ++  +  R   GIR I R+F+ MD+ G   LD +D +WGL D G+ +S+EE + V++ FD  G+G V ++EFL A++  L+  R ++I+ A+ KLD +  G + L +I+  +D S  P+V  G +TP++    F + WD  +KDG VT +E+  Y+ DVSASID D YFA ++ +AW L
Sbjct:  200 RFEKQGEPVEANTPILIRHCSTSHYLAADLNK-LKNDFGTEFEVCVNSFATKNRSQNLALEKEGKITGDIPSKFQEDQNVFYFVTAPSPAYSVPIEELNKFTIEDLIREIKQKIVERSANGIRGIARIFKAMDENGSKTLDVDDFRWGLKDYGITISKEEAQQVMEHFDRDGNGQVDFNEFLRAMKGDLNTFRKRYIKMAYDKLDINKDGLVKLDDISKIYDASRHPDVLQGKKTPDQVFVEFMKLWDTQEKDGIVTFDEFCDYYSDVSASIDSDDYFAEMMISAWKL 486          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71623.17074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C0P5_CAFRO5.620e-8953.87Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S1CF03_9STRA2.500e-7647.83Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A812MKX6_9DINO4.350e-7548.53Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=2309... [more]
A0A7S0JR53_CAFRO6.370e-6759.57Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A7S2XX41_9STRA3.030e-5739.12Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1R2BPK7_9CILI1.880e-5135.76Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
A0A1J4KY30_9EUKA6.300e-4644.26EF hand family protein n=1 Tax=Tritrichomonas foet... [more]
J9FGJ2_9SPIT1.340e-4537.10Uncharacterized protein n=1 Tax=Oxytricha trifalla... [more]
A0A7S1NH27_9EUGL2.690e-4534.88Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A078A8P8_STYLE3.720e-4536.46Calcyphosin-like protein n=1 Tax=Stylonychia lemna... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71623contigM-pyrifera_M_contig71623:10..852 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue2.6e-35
Seed eggNOG ortholog529818.AMSG_00795T0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size843
Cds size843
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816611.6209843-CDS-M-pyrifera_M_contig71623:9..8521622816611.6209843-CDS-M-pyrifera_M_contig71623:9..852Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71623 10..852 +
1692278076.7855759-CDS-M-pyrifera_M_contig71623:9..8521692278076.7855759-CDS-M-pyrifera_M_contig71623:9..852Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71623 10..852 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71623.17074.1prot_M-pyrifera_M_contig71623.17074.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71623 10..852 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71623.17074.1

>prot_M-pyrifera_M_contig71623.17074.1 ID=prot_M-pyrifera_M_contig71623.17074.1|Name=mRNA_M-pyrifera_M_contig71623.17074.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp
RFEKAGLPGRAGDAVQLVHASTNQPLAAQLGDAVATDFGPELQVHAFAHR
PAGIISSDRARPALPPNLWRFRLASDAAAAVDERDLRPVTAEALMERVRA
ALAARGTFGIRAIGRLFRIMDDKGDGRLDREDLKWGLFDVGVRLSEEEFR
IVLDAFDESGDGLVQYDEFLTAVRPPLSEERLKWIERAFAKLDHDGSGEI
SLAEIAATFDPSALPEVQSGDQTPEEAVRVFAEQWDADKDGTVTKEEWVQ
YFEDVSASIDEDSYFAHVIQTAWGLGEEGE*
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mRNA from alignment at M-pyrifera_M_contig71623:10..852+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71623.17074.1 ID=mRNA_M-pyrifera_M_contig71623.17074.1|Name=mRNA_M-pyrifera_M_contig71623.17074.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig71623:10..852+ (Macrocystis pyrifera P11B4 male)
AGATTCGAAAAGGCCGGATTGCCCGGTCGCGCGGGCGATGCCGTGCAACT CGTGCATGCCTCCACCAACCAGCCGCTGGCGGCGCAGCTGGGCGACGCGG TGGCCACGGATTTCGGCCCAGAGCTGCAAGTGCACGCATTCGCCCACCGC CCCGCAGGCATTATCTCATCCGATCGCGCCCGGCCCGCGCTCCCTCCCAA CCTCTGGCGCTTCCGCCTGGCCAGCGACGCGGCCGCAGCAGTGGATGAGC GGGACCTGCGGCCCGTTACCGCGGAAGCGCTGATGGAACGGGTGCGCGCT GCTTTGGCTGCTAGAGGCACGTTCGGGATTCGCGCCATCGGCCGATTGTT CCGCATCATGGACGACAAGGGCGACGGGAGGCTGGATCGCGAGGATCTCA AGTGGGGCCTCTTCGACGTGGGCGTGCGCCTGAGCGAGGAGGAATTTCGC ATCGTGCTGGACGCCTTTGACGAATCCGGGGACGGATTGGTGCAATATGA CGAGTTTTTGACGGCCGTACGCCCGCCCTTGTCCGAGGAGCGCCTGAAAT GGATCGAACGGGCATTTGCAAAACTCGACCACGATGGAAGTGGAGAAATT TCACTCGCAGAAATCGCAGCAACTTTTGACCCATCAGCGCTGCCAGAAGT GCAAAGTGGAGACCAGACCCCGGAAGAAGCCGTCAGGGTCTTCGCAGAAC AGTGGGACGCAGACAAAGACGGTACCGTGACCAAAGAAGAGTGGGTGCAA TACTTCGAAGACGTCTCCGCCTCCATCGACGAAGACAGCTACTTCGCACA CGTCATCCAGACCGCGTGGGGGCTCGGGGAGGAAGGAGAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig71623:10..852+

>mRNA_M-pyrifera_M_contig71623.17074.1 ID=mRNA_M-pyrifera_M_contig71623.17074.1|Name=mRNA_M-pyrifera_M_contig71623.17074.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig71623:10..852+ (Macrocystis pyrifera P11B4 male)
AGATTCGAAAAGGCCGGATTGCCCGGTCGCGCGGGCGATGCCGTGCAACT
CGTGCATGCCTCCACCAACCAGCCGCTGGCGGCGCAGCTGGGCGACGCGG
TGGCCACGGATTTCGGCCCAGAGCTGCAAGTGCACGCATTCGCCCACCGC
CCCGCAGGCATTATCTCATCCGATCGCGCCCGGCCCGCGCTCCCTCCCAA
CCTCTGGCGCTTCCGCCTGGCCAGCGACGCGGCCGCAGCAGTGGATGAGC
GGGACCTGCGGCCCGTTACCGCGGAAGCGCTGATGGAACGGGTGCGCGCT
GCTTTGGCTGCTAGAGGCACGTTCGGGATTCGCGCCATCGGCCGATTGTT
CCGCATCATGGACGACAAGGGCGACGGGAGGCTGGATCGCGAGGATCTCA
AGTGGGGCCTCTTCGACGTGGGCGTGCGCCTGAGCGAGGAGGAATTTCGC
ATCGTGCTGGACGCCTTTGACGAATCCGGGGACGGATTGGTGCAATATGA
CGAGTTTTTGACGGCCGTACGCCCGCCCTTGTCCGAGGAGCGCCTGAAAT
GGATCGAACGGGCATTTGCAAAACTCGACCACGATGGAAGTGGAGAAATT
TCACTCGCAGAAATCGCAGCAACTTTTGACCCATCAGCGCTGCCAGAAGT
GCAAAGTGGAGACCAGACCCCGGAAGAAGCCGTCAGGGTCTTCGCAGAAC
AGTGGGACGCAGACAAAGACGGTACCGTGACCAAAGAAGAGTGGGTGCAA
TACTTCGAAGACGTCTCCGCCTCCATCGACGAAGACAGCTACTTCGCACA
CGTCATCCAGACCGCGTGGGGGCTCGGGGAGGAAGGAGAGTAGAGATTCG
AAAAGGCCGGATTGCCCGGTCGCGCGGGCGATGCCGTGCAACTCGTGCAT
GCCTCCACCAACCAGCCGCTGGCGGCGCAGCTGGGCGACGCGGTGGCCAC
GGATTTCGGCCCAGAGCTGCAAGTGCACGCATTCGCCCACCGCCCCGCAG
GCATTATCTCATCCGATCGCGCCCGGCCCGCGCTCCCTCCCAACCTCTGG
CGCTTCCGCCTGGCCAGCGACGCGGCCGCAGCAGTGGATGAGCGGGACCT
GCGGCCCGTTACCGCGGAAGCGCTGATGGAACGGGTGCGCGCTGCTTTGG
CTGCTAGAGGCACGTTCGGGATTCGCGCCATCGGCCGATTGTTCCGCATC
ATGGACGACAAGGGCGACGGGAGGCTGGATCGCGAGGATCTCAAGTGGGG
CCTCTTCGACGTGGGCGTGCGCCTGAGCGAGGAGGAATTTCGCATCGTGC
TGGACGCCTTTGACGAATCCGGGGACGGATTGGTGCAATATGACGAGTTT
TTGACGGCCGTACGCCCGCCCTTGTCCGAGGAGCGCCTGAAATGGATCGA
ACGGGCATTTGCAAAACTCGACCACGATGGAAGTGGAGAAATTTCACTCG
CAGAAATCGCAGCAACTTTTGACCCATCAGCGCTGCCAGAAGTGCAAAGT
GGAGACCAGACCCCGGAAGAAGCCGTCAGGGTCTTCGCAGAACAGTGGGA
CGCAGACAAAGACGGTACCGTGACCAAAGAAGAGTGGGTGCAATACTTCG
AAGACGTCTCCGCCTCCATCGACGAAGACAGCTACTTCGCACACGTCATC
CAGACCGCGTGGGGGCTCGGGGAGGAAGGAGAGTAG
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