mRNA_M-pyrifera_M_contig71609.17068.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A855C5D3_BACCE (Toxin n=1 Tax=Bacillus cereus TaxID=1396 RepID=A0A855C5D3_BACCE) HSP 1 Score: 57.8 bits (138), Expect = 4.790e-8 Identity = 24/62 (38.71%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 58 HFMLDGINLQNVFEPTGDQYN-----------SFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 HF+LDG+N+++V T +Q N S T++E+R+V++NWDR+KN ++FY + +K+ Sbjct: 836 HFVLDGLNIEHVVNKTKEQTNEMMGRLLGPGESITASELRYVYRNWDRLKNRVSFYRDNEKL 897
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: UPI0012FF98CF (hypothetical protein n=1 Tax=Enterobacter roggenkampii TaxID=1812935 RepID=UPI0012FF98CF) HSP 1 Score: 53.5 bits (127), Expect = 4.860e-7 Identity = 21/53 (39.62%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 58 HFMLDGINLQNVFEPTGDQYN-SFTSAEIRFVFKNWDRIKNTITFYSNGKKIK 213 HF+LDG+N+Q V + Y T++E+R++++NW R+K+ + FY NG+ +K Sbjct: 101 HFILDGLNVQGVINKDKNFYGLKITASELRYIYRNWGRLKDKVIFYLNGEVVK 153
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: UPI0006B1D441 (hypothetical protein n=3 Tax=Enterococcus hirae TaxID=1354 RepID=UPI0006B1D441) HSP 1 Score: 53.9 bits (128), Expect = 9.510e-7 Identity = 23/64 (35.94%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 31 ALLKPDVNKHFMLDGINLQNVFEPTG---DQYNSFTSAEIRFVFKNWDRIKNTITFYSNGKKIK 213 A+ K D+ ++ LDGIN++ V + + + S TS E+R+V++NW++++ +TF S G+K+K Sbjct: 161 AMEKQDLELYYCLDGINIEFVLDKSNLWEREGKSLTSRELRYVYRNWEKLRGKVTFISQGEKVK 224
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A1L8WPL6_9ENTE (Uncharacterized protein n=1 Tax=Enterococcus ratti TaxID=150033 RepID=A0A1L8WPL6_9ENTE) HSP 1 Score: 51.6 bits (122), Expect = 4.150e-6 Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 1 DTVIKRCCQAAL----LKPDVNKHFMLDGINLQNVFEPT---GDQYNSFTSAEIRFVFKNWDRIKNTITF 189 D IKR C+ + + PDV HF LDGI++++V G S TS+E+R+V++NW+ +K + F Sbjct: 42 DLHIKRGCKIGIDIAKINPDVEIHFCLDGIDIKDVISKAQGEGIYGGSMTSSELRYVYRNWEELKERVIF 111
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A243EHM7_BACTU (Toxin n=1 Tax=Bacillus thuringiensis serovar toumanoffi TaxID=180862 RepID=A0A243EHM7_BACTU) HSP 1 Score: 52.0 bits (123), Expect = 5.230e-6 Identity = 18/51 (35.29%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 58 HFMLDGINLQNVFEPTGDQYNSFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 HF+LD ++++++ GD S T++E+R+V++N +R++ + FY NG+K+ Sbjct: 831 HFVLDNLDIESIVAKRGDSGESITASELRYVYRNRERLQGRVVFYRNGEKL 881
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A855BUI6_BACCE (Toxin n=1 Tax=Bacillus cereus TaxID=1396 RepID=A0A855BUI6_BACCE) HSP 1 Score: 52.0 bits (123), Expect = 5.230e-6 Identity = 19/51 (37.25%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 58 HFMLDGINLQNVFEPTGDQYNSFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 HF+LDG+N+++V +G+ S T++E+R+V++N +R+ + FY N +K+ Sbjct: 831 HFVLDGLNIESVVSKSGEYGKSITASELRYVYRNKERLAGRLNFYKNMEKV 881
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: UPI000BF848AF (toxin n=1 Tax=Bacillus cereus TaxID=1396 RepID=UPI000BF848AF) HSP 1 Score: 51.6 bits (122), Expect = 7.160e-6 Identity = 18/51 (35.29%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 58 HFMLDGINLQNVFEPTGDQYNSFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 HF+LD ++++++ GD S T++E+R+V++N +R++ + FY NG+K+ Sbjct: 831 HFVLDNLDIESIVAKRGDSGESITASELRYVYRNRERLQGRVIFYRNGEKL 881
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A511J0M6_9ENTE (Uncharacterized protein n=2 Tax=Enterococcus villorum TaxID=112904 RepID=A0A511J0M6_9ENTE) HSP 1 Score: 50.1 bits (118), Expect = 2.420e-5 Identity = 21/62 (33.87%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 25 QAALLKPDVNKHFMLDGINLQNVFEPTGDQYNSFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 + A + D+ HF+LD I+ + V D Y+ +TS E+R+V++NW+++K I F N +++ Sbjct: 143 EMAQIHDDLIVHFVLDNIDFKEVLSKNMDGYD-YTSKELRYVYRNWEKLKEKIIFIENNERV 203
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A329H4K8_9ENTR (Uncharacterized protein n=1 Tax=Enterobacter sp. RIT 418 TaxID=2202164 RepID=A0A329H4K8_9ENTR) HSP 1 Score: 49.7 bits (117), Expect = 3.180e-5 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 7 VIKRCCQAAL---LKP--DVNKHFMLDGINLQNVF--EPTGDQYN--SFTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 VI R +AAL LK D HF+LDGI+L V E G Y+ S T+AE+RF+F++ D I+N + FY +G ++ Sbjct: 210 VITRGSKAALDMILKSTGDDKIHFILDGIDLNKVINKEEVGHNYSDRSTTAAELRFLFRHKDEIRNKVNFYMHGSQV 286
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Match: A0A855BNT1_BACCE (Toxin n=1 Tax=Bacillus cereus TaxID=1396 RepID=A0A855BNT1_BACCE) HSP 1 Score: 49.7 bits (117), Expect = 3.190e-5 Identity = 23/72 (31.94%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 13 KRCCQAALLKPDVNKHFMLDGINLQNVFEPTGDQYNS------FTSAEIRFVFKNWDRIKNTITFYSNGKKI 210 K + A + +HF+LDG+++++V T NS T++E+R+V++N+D++K I FY N +K+ Sbjct: 199 KLTLEMAASNKNTQRHFVLDGLDIEHVVNKTKGMGNSTGLGESVTASELRYVYRNYDKLKGRILFYRNKEKL 270 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71609.17068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig71609.17068.1 >prot_M-pyrifera_M_contig71609.17068.1 ID=prot_M-pyrifera_M_contig71609.17068.1|Name=mRNA_M-pyrifera_M_contig71609.17068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp DTVIKRCCQAALLKPDVNKHFMLDGINLQNVFEPTGDQYNSFTSAEIRFVback to top mRNA from alignment at M-pyrifera_M_contig71609:792..1004- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig71609.17068.1 ID=mRNA_M-pyrifera_M_contig71609.17068.1|Name=mRNA_M-pyrifera_M_contig71609.17068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=213bp|location=Sequence derived from alignment at M-pyrifera_M_contig71609:792..1004- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig71609:792..1004- >mRNA_M-pyrifera_M_contig71609.17068.1 ID=mRNA_M-pyrifera_M_contig71609.17068.1|Name=mRNA_M-pyrifera_M_contig71609.17068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig71609:792..1004- (Macrocystis pyrifera P11B4 male)back to top |