prot_M-pyrifera_M_contig71275.16997.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig71275.16997.1
Unique Name	prot_M-pyrifera_M_contig71275.16997.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	206

Homology

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A3B1JYW7_ASTMX (DNA polymerase iota n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1JYW7_ASTMX)

HSP 1 Score: 116 bits (290), Expect = 1.740e-26
Identity = 79/203 (38.92%), Postives = 120/203 (59.11%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLP-PRVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFP 203
            L   S IAA +R A+R  LGLT+CAGV+T+KL AK  +   KPN Q+T+LP +    ++ L  P  +PG+GY   + L+  GV +V +L    + +++   G +VNG+       +A G D+ PV   +  P+S+SDEDSF+ + T+ EV+  ++ +++ L  R+  D     R PQT+RLT+RR     R+ SR SR CP P
Sbjct:  172 LAVGSAIAAELREALRSRLGLTSCAGVATSKLLAKLVSGAFKPNQQTTLLPQSSAELMNSLSGPCKVPGIGYRTVEKLKVLGVVSVRDLQLFPLRDLIREFG-EVNGR---RIQNLACGVDLSPVT-PAGPPQSLSDEDSFKKISTVREVQSKVTELLNSLCERMCKDG----RLPQTVRLTLRRASAPSRWFSRESRQCPIP 365

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: UPI00201EA60E (DNA polymerase iota-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EA60E)

HSP 1 Score: 112 bits (279), Expect = 5.670e-25
Identity = 80/205 (39.02%), Postives = 111/205 (54.15%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPP-RVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR----RYTSRASRSCPFPASI 206
            L   S IAA IR A+   LG+T CAG++  KL AK  A   KPN Q+T+ P+     LS LP  R +PGVG+   K L +AGV  V +L    +  +    G  +    A     ++ G D  PV+  S  P++ISDEDSFR  +T+A+ ++ I +++  L  RL  D     R P T RLT+RR    +YT R S+ CP PA +
Sbjct:  195 LAVGSRIAADIREALHEELGITCCAGIAHNKLLAKLVAGTHKPNQQTTLFPNNTSTLLSSLPKARSIPGVGWNTSKKLAEAGVHGVMDLQECDLATLTEECGTTM----AVTIKQLSHGVDDSPVVQYS-LPQTISDEDSFRKCNTMAQTQQKIDNLLSSLLKRLVEDG----RTPHTFRLTVRRAEYQKYTKRESKQCPVPAHV 390

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: UPI001EE57BFB (DNA polymerase iota-like isoform X1 n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE57BFB)

HSP 1 Score: 110 bits (276), Expect = 1.430e-24
Identity = 79/205 (38.54%), Postives = 110/205 (53.66%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPP-RVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR----RYTSRASRSCPFPASI 206
            L   S IAA IR A+ L LG+T CAG++  KL AK  A   KPN Q+T+ P ++   LS L   R LPGVG    + L +AG+ +V +L    +  +    G  +    A     ++ G D  PV+  S  P++ISDEDSFR   TI + ++ I  ++  L  RL  D     R P T RLT+RR    +YT+R S+ CP PA +
Sbjct:  198 LAVGSQIAADIREALHLELGITCCAGIAHNKLLAKLVAGTHKPNQQTTLFPDSVFTLLSSLSQARSLPGVGGNTSRKLAEAGIHSVRDLQEGDISTLTEECGTTM----AVTIKQLSHGVDDSPVVQYS-RPQTISDEDSFRKCSTIVQTQQKIDELLSSLLKRLVEDG----RTPHTFRLTVRRAGFPKYTNRESKQCPVPAHV 393

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A3Q2YF60_HIPCM (DNA polymerase iota n=5 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YF60_HIPCM)

HSP 1 Score: 107 bits (267), Expect = 1.930e-23
Identity = 75/203 (36.95%), Postives = 113/203 (55.67%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPP-RVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFP 203
            L   S +AA +R AIR  LGLT+CAGV+T+KL AK  +   KPN Q+T+LP  +   +  L   R +PGVG+   K L+  G+ +V++L    +  ++     ++    AA    ++ G D  PV  T  AP+S+SDEDSF+ +  + EV   I  ++  L  R+  D     R+PQT RL++R+     ++ SR SR CP P
Sbjct:  182 LALGSHVAAELREAIRDRLGLTSCAGVATSKLLAKLVSGTFKPNQQTTLLPENVDHIMGSLGGLRKIPGVGHQTAKRLQALGLVSVSDLQLFPLTALIR----ELGSPCAAHLKNLSLGVDDSPVNPTG-APQSLSDEDSFKKMSCVKEVMDKIQQLLGSLVERMRKDG----RQPQTFRLSVRKYSASNKWCSRESRQCPIP 375

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A7S1G803_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G803_9STRA)

HSP 1 Score: 102 bits (255), Expect = 4.410e-23
Identity = 70/211 (33.18%), Postives = 111/211 (52.61%), Query Frame = 0

Query:    5 EVLRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPPRVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFL-AMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRRR--------YTSRASRSCPFPASI 206
            E LR  +  A  +R  I   +G+TTC G+ST     K  A + KPN Q+T+LP ALP +L+PLP R LPG G      L+ + V+TV +L +L ++ +      ++  ++AA +L  MA+  D RPV + +  P  I +EDSF   +  ++V+R +  + D L  R+  D+    R P T+R+ +R +        Y +   R C  P  +
Sbjct:   13 ERLRVGAQFARELRLGIFAQVGITTCGGISTCLFAGKHGAEMHKPNQQTTVLPHALPAYLTPLPVRRLPGCGRRYSAILKNSHVETVGDLRKLPLQALK-----EILPEAAATYLYRMARAIDDRPV-SDAKPPVQIGEEDSFTRCNRYSDVKRRLFELSDSLVPRIDDDFARSGRLPHTIRVRVRHKAGEGRHAYYGASHVRQCALPVDV 217

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: UPI001F07C562 (DNA polymerase iota n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07C562)

HSP 1 Score: 104 bits (260), Expect = 1.810e-22
Identity = 76/206 (36.89%), Postives = 110/206 (53.40%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPP-RVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFPASI 206
            L   S IAA +R  I   LGLT CAGV+T KL AK  +   KPN Q+T+LP ++   +  L   R +PGVG+   K L+  G+ +V +L    + E+V     +    +A     +A G D  PV  T  AP+S+SDEDSF+ +  + +V + +  ++  L  R+  D     R+P T RLTIR+     ++ SR SR CP P  I
Sbjct:  197 LAVGSHIAAELREDIHSKLGLTCCAGVATNKLLAKLVSGTFKPNQQTTLLPESIRDIMGRLSGLRKVPGVGHQTAKRLQALGLVSVQDLQLFPLAELVQ----EFGSSTAQRLHNLALGIDDAPVTPTG-APRSLSDEDSFKKISLVKDVLQKVEDLLGSLLERMYKDG----RQPLTFRLTIRKYSATNKWFSRESRQCPIPTHI 393

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A4W4F742_ELEEL (DNA polymerase iota n=4 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4F742_ELEEL)

HSP 1 Score: 104 bits (259), Expect = 2.490e-22
Identity = 76/203 (37.44%), Postives = 109/203 (53.69%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLP-PRVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFP 203
            L   S IAA +R A+   LGLT+CAG++++KL AK  +   KPN Q+ +LP +    +  L  P  +PG+GY  G+ L+  GV +V  L    + E+ S    +    +A     +A G D  PV   +  P+S+SDEDSFR + T+ EV   +  ++  L  R+  D     R PQTLRLT+RR     R+  R SR CP P
Sbjct:  176 LALGSIIAAEMREALWSRLGLTSCAGIASSKLMAKLVSGTFKPNQQTALLPQSTAELMGSLAGPCKVPGIGYRTGEKLKALGVLSVRALQVAPLFELAS----EFGEATAKRIQNLAYGIDPSPVT-PAGPPQSLSDEDSFRKISTVMEVEGKVRELLSCLMERMRKDG----RLPQTLRLTLRRSTALNRWFCRESRQCPIP 369

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A7J5ZWE6_AMEME (UmuC domain-containing protein n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A7J5ZWE6_AMEME)

HSP 1 Score: 103 bits (258), Expect = 3.240e-22
Identity = 74/203 (36.45%), Postives = 117/203 (57.64%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLP-PRVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFP 203
            L   S IA+ +R  +   LGLT+CAGV+++K+ AK  +   KPN Q+T+LP ++P+ +S L  P   PG+G+   + L+  GV +V +L    + ++V   G + N K      ++A G D+ PV   +  P+S+SDEDSF+ + T++E    IS ++  LS R+  D     R PQT++L++RR     R+ SR SR  P P
Sbjct:  170 LALGSVIASELREVLFSRLGLTSCAGVASSKMLAKLVSGTFKPNQQTTLLPQSVPKLMSGLSGPSRTPGIGHKTAERLKALGVLSVRDLQLFPLSKLVCEFG-EANAK---RMQSLACGVDLSPVT-PAGPPQSLSDEDSFKKISTLSEAESKISELLLSLSERMRKDG----RLPQTIKLSLRRYGAPTRWFSRESRQGPIP 363

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: UPI0010A2E031 (DNA polymerase iota isoform X2 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A2E031)

HSP 1 Score: 102 bits (255), Expect = 4.220e-22
Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 0

Query:    7 LRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPP-RVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLA-MAKGEDVRPVIATSAAPKSISDEDSFRPLDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRR-----RYTSRASRSCPFPASI 206
            L   S IAA +R A+   LGLT+CAG++++KL AK  +   KPN Q+T+LP      +  L   R +PG+GY  G+ L+  G+  V +L    +  +      K  G++ A+ +  +A G D  PV   S  P+S+SDEDSF+ + T+ E  + +  ++  L  R+  D     R+P T RLTIRR     R+ SR SR CP P  I
Sbjct:  174 LAVGSQIAAELRGALHSRLGLTSCAGIASSKLLAKLVSGAHKPNQQTTLLPKYTGDIIGSLTGLRQIPGIGYRTGEKLKALGLLAVRDLQVFHLAALA-----KEFGEANAQRIQNLAHGIDESPVT-PSGPPQSLSDEDSFKEISTVTETVKKLEDLLTSLLERMHKDG----RQPSTFRLTIRRFSSTDRWFSRESRQCPIPIHI 370

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BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Match: A0A0G4FTF3_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FTF3_VITBC)

HSP 1 Score: 103 bits (256), Expect = 5.510e-22
Identity = 77/201 (38.31%), Postives = 105/201 (52.24%), Query Frame = 0

Query:    8 RTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPNLQSTILPSALPRFLSPLPPRVLPGVGYAVGKALEKAGVKTVNELSRLSVEEIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRP--LDTIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRRR---YTSRASRSCPFP 203
            + AS IA  IR  I   LGLT C GV   K  +K  A L KPN+Q+TILPSA+  FL+PLP R LPG+G    K L + G+ T+ +L+  SV ++V      +     A  L     +     +     PKS+S EDS R   + T  +  R +S ++  LS RL+ DY E  R P  + L+ R R   Y+ R SR+ P P
Sbjct:  256 KIASIIAKEIRDRIHTRLGLTCCGGVGPNKPVSKMVAGLHKPNMQTTILPSAVRDFLAPLPLRKLPGIGGTYEKTLTEGGITTLGQLASRSVGDLVRL----LGSVKVATVLKERATDGGNEPVQEGGPPKSLSCEDSLRDGEVTTPEQALRVLSALVAELSQRLSDDYAEHHRLPTNVVLSWRLRGMGYSGRHSRAAPLP 452

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig71275.16997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3B1JYW7_ASTMX	1.740e-26	38.92	DNA polymerase iota n=2 Tax=Astyanax mexicanus Tax...	[more]
UPI00201EA60E	5.670e-25	39.02	DNA polymerase iota-like n=1 Tax=Haliotis rufescen...	[more]
UPI001EE57BFB	1.430e-24	38.54	DNA polymerase iota-like isoform X1 n=2 Tax=Haliot...	[more]
A0A3Q2YF60_HIPCM	1.930e-23	36.95	DNA polymerase iota n=5 Tax=Hippocampus comes TaxI...	[more]
A0A7S1G803_9STRA	4.410e-23	33.18	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
UPI001F07C562	1.810e-22	36.89	DNA polymerase iota n=1 Tax=Hypomesus transpacific...	[more]
A0A4W4F742_ELEEL	2.490e-22	37.44	DNA polymerase iota n=4 Tax=Electrophorus electric...	[more]
A0A7J5ZWE6_AMEME	3.240e-22	36.45	UmuC domain-containing protein n=3 Tax=Ictaluridae...	[more]
UPI0010A2E031	4.220e-22	36.71	DNA polymerase iota isoform X2 n=1 Tax=Denticeps c...	[more]
A0A0G4FTF3_VITBC	5.510e-22	38.31	UmuC domain-containing protein n=2 Tax=Vitrella br...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036775	DNA polymerase, Y-family, little finger domain superfamily	GENE3D	3.30.1490.100		coord: 137..206 e-value: 8.7E-11 score: 43.9
IPR036775	DNA polymerase, Y-family, little finger domain superfamily	SUPERFAMILY	100879	Lesion bypass DNA polymerase (Y-family), little finger domain	coord: 138..205
None	No IPR available	GENE3D	3.30.70.270		coord: 4..61 e-value: 9.0E-14 score: 54.0
None	No IPR available	GENE3D	1.10.150.20		coord: 62..125 e-value: 1.2E-9 score: 40.2
None	No IPR available	PANTHER	PTHR46404	FAMILY NOT NAMED	coord: 7..206
None	No IPR available	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 7..131
IPR017961	DNA polymerase, Y-family, little finger domain	PFAM	PF11799	IMS_C	coord: 133..203 e-value: 1.6E-6 score: 28.8
IPR001126	UmuC domain	PROSITE	PS50173	UMUC	coord: 17..76 score: 14.165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig71275	contig	M-pyrifera_M_contig71275:167..910 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig71275.16997.1	mRNA_M-pyrifera_M_contig71275.16997.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig71275 167..910 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig71275.16997.1 ID=prot_M-pyrifera_M_contig71275.16997.1|Name=mRNA_M-pyrifera_M_contig71275.16997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
MPWFEVLRTASWIAAAIRRAIRLNLGLTTCAGVSTTKLGAKTAASLSKPN
LQSTILPSALPRFLSPLPPRVLPGVGYAVGKALEKAGVKTVNELSRLSVE
EIVSAGGGKVNGKSAAEFLAMAKGEDVRPVIATSAAPKSISDEDSFRPLD
TIAEVRRAISHVIDGLSIRLAADYGEFVRRPQTLRLTIRRRYTSRASRSC
PFPASI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036775	DNA_pol_Y-fam_lit_finger_sf
IPR017961	DNA_pol_Y-fam_little_finger
IPR001126	UmuC