prot_M-pyrifera_M_contig712.16983.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig712.16983.1
Unique Nameprot_M-pyrifera_M_contig712.16983.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length642
Homology
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Match: D7FTY6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY6_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 4.820e-183
Identity = 330/561 (58.82%), Postives = 402/561 (71.66%), Query Frame = 0
Query:   95 MALLHDVIQTKDNGLQKLKRETDRLRRDIKRLQVEGEEHKGQENAMIVAASQNTRLLKLLEQEELKREDVLAERDTALAEVKELKHRTRTSDERHAERTAGLEVKLLKALAENTALNKKYSGTGEKILQLEKDLESIREQSTFDRETARAELRRHRQSHYGILSQLQGATDELQRTKDEVEGRAQALQVCRRQSAELEMRLGTVQSDLCTTERRSTEREVRSDGDARIAAARLSKERCLSESLENKVACMSRTVLRLVERHKELQTEVDGHRNEEKRLKAHIERLGERELRLQQQMVRLESRQSVEVTHRRLHGAIDTFNSQMMIPLTPAAC-------DESKSSGCAETLPYG-----RQQLLFKFIALFRLVSGQGAATLVKGVAEELNLSDCGLQDAEVDEVMGLVCSCPRLACLDLSMNTIGDGGAASIAQALRQPSCCLRKIDLRGNQMSMEGVRVLAKALQENVSRGVSHVYVHNEGRIDALARQRGEDIKNINTEGNNQAETEQDAAASFVSVAVVDVRNNKP-PITNTSARKTVLPVTSRGKRQGGSLGLAVG 642
            M  LH VI+TKDN +QK KRE+DRLRR+IKRL VE EE +GQENAMIVAA+QN+RLLKLLEQEELKRE VL ERD ALAEV ELKHR RTSDE+HA+RT+GLEVKL+KA+ EN AL +KYS T EKI  L K+LES R+Q+ FD+ETA   L   RQS Y ++S+LQ + DELQR KD+ E +   L VCR+Q+AELEMRLGT+QSDL + ER S+ERE  +D D+R+A ARL KE  LSESL NKVA MSRT+LRLVERHK+L+ +V  H  EE RL   IE   +RE+R QQ++VRL+S  +VE TH+RL+ A+D FNSQM  P  PAA        DE+ + G +     G     R+QLL   +ALF LV+G+   T  +    EL+LSDCGL D +V  VM L CSCPRL  L+LSMN IGD GAAS+A  LR  SC LR++DL  NQMSMEGVRVLAKAL+EN SRGVSHVYVH+EGRIDAL R++ +  +++  E N+  + EQDA   F SV +VD R+N P P  N     T LP+  RGKRQ G +  A G
Sbjct:    1 MGSLHGVIETKDNAVQKHKRESDRLRREIKRLHVEREERQGQENAMIVAATQNSRLLKLLEQEELKRESVLTERDEALAEVSELKHRVRTSDEQHAKRTSGLEVKLIKAIGENLALKEKYSSTDEKIETLTKELESARKQAKFDKETAETALSTLRQSQYRVISELQESRDELQRYKDQAETKGDELAVCRQQNAELEMRLGTLQSDLNSMERTSSEREAAADEDSRLAQARLEKEISLSESLHNKVASMSRTILRLVERHKDLKAQVVKHEAEEARLGDQIEEARKREVRFQQKVVRLKSSLTVETTHKRLYAALDKFNSQMTKPPLPAANGGGNLPHDEALAIGPSTQRIKGDALRCRRQLLSNHMALFGLVAGRDDGTSARHALNELDLSDCGLDDFDVHGVMELACSCPRLEVLNLSMNYIGDAGAASLATVLRLASCGLRRLDLTCNQMSMEGVRVLAKALEENCSRGVSHVYVHSEGRIDALGREKEDKCQSVK-ERNSVPDEEQDALGMFFSVVIVDARDNHPQPAGNPD---TALPLARRGKRQIGHIAAARG 557          
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Match: A0A835Z915_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z915_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.060e-41
Identity = 179/615 (29.11%), Postives = 274/615 (44.55%), Query Frame = 0
Query:   50 TKEETTHLIKLRDDMISAKHEEASVLILSQQNEDLREGIDAVESEMALLHDVIQTKDNGLQKLKRETDRLRRDIKRLQVEGEEHKGQENAMIVAASQNTRLLKLLEQEELKREDVLAERDTALAEVKELKHRTRTSDERHAERTAGLEVKLLKALAENTALNKKYSGTGEKILQLEKDLESIREQSTFDRETARAELRRHRQSHYGILSQLQGATDELQRTKDEVEGRAQALQVCRRQSAELEMRLGTVQSDLCTTERRSTEREVRSDGDARIAAARLSKERCLSESLENKVACMSRTVLRLVERHKELQTEVDGHRNEEKRLKAHIERLGERELRLQQQMVRLESRQSVEVTHRRLHGAIDTFNSQMMIPL--------------------TPAACDESKSSGCA-ETLPYGRQQLLFKFIALFRLVSGQGAATLVK----------------------GVAEEL--NLSDCGLQDAEVDEVMGLVCSCPRLACL-----DLSMNTIGDGGAASIAQALRQPSCCLRKIDLRGNQMSMEGVRVLAKALQENVSRGVSHVYVHNEGRIDALARQRGEDIKNINTEGNNQ--AETEQDAAA--SFVSVAVVDVRNN 610
            +K +   L+++RD M+ AK +E S  +++ QN  LR+  +A E+EMA L   ++ K+  L   ++ ++R  R +KRLQ E E + G+E A+ ++A+Q+TRLLKLLEQEE+KRE +L E+D A++EV ELK R     + HAE+   L+++L KAL +  A N+ ++G                                                      +D  E  A  L     + A  E +L    + L      + + + R+  DA +A AR   +R   E L+ +V   +                                       +L+  + +L S  S+E T RRLH A+D FN+QM   +                       A   + S+  A +   + ++Q+L  F+      +   AA  V                       G   EL   L +CG+ D+++D V   +        L     DLS N I D GA+ +A  LR   C ++++DLR NQ++MEGVR LA+AL+     G+SHVYVH EGRIDAL  Q+ +      T G++   A TEQ      S VS+AVVDVR+N
Sbjct:   35 SKVQLLRLLRVRDGMLEAKQKEVS--LVAHQNGLLRDQTNAAEAEMAALQLTLKEKEQALSAERKVSERAGRAVKRLQNEMEHYLGREQAIHMSAAQSTRLLKLLEQEEIKREHLLREKDAAVSEVGELKARVAALTKTHAEQEVDLQLRLAKALRDLAATNEHHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDGGEDAAALLSALSHKGAAQEAQLAAALAALADVRAAARDAQARAAEDAALADARAESDRAAKEKLQERVRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALTQQLRGVVDQLRSAASMEATQRRLHRALDKFNTQMAPGVGGXXXXXXXXXXXXXXXXFVADMAGGVTASAWTALQQQTWSKRQMLSLFVQHAAATAAASAANAVVPDSGACDADSPASFKMERSGAGGTPSELLIPLGNCGIVDSDIDCVADTLARVAEYTALPPLMVDLSANFITDTGASQLAAVLRLDGCKVKRLDLRYNQVTMEGVRALARALESCTHHGISHVYVHAEGRIDALGVQQPQ----CTTGGSSTDAAATEQQPLGPDSLVSIAVVDVRDN 643          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig712.16983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTY6_ECTSI4.820e-18358.82Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z915_9STRA7.060e-4129.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 348..396
NoneNo IPR availableCOILSCoilCoilcoord: 154..181
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availableCOILSCoilCoilcoord: 102..129
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 494..521
e-value: 0.045
score: 22.9
coord: 523..550
e-value: 7.4E-4
score: 28.8
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 470..593
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 470..593
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 471..551
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 454..597
e-value: 1.0E-20
score: 75.7
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 523..545
e-value: 0.6
score: 10.3
coord: 494..516
e-value: 0.0022
score: 17.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig712contigM-pyrifera_M_contig712:1743..17857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig712.16983.1mRNA_M-pyrifera_M_contig712.16983.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig712 1743..17857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig712.16983.1 ID=prot_M-pyrifera_M_contig712.16983.1|Name=mRNA_M-pyrifera_M_contig712.16983.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=642bp
MESTCASTTPSRGGCSSTSVGKLGMSKGSRKAKTKAVNRNEVSVDPSSRT
KEETTHLIKLRDDMISAKHEEASVLILSQQNEDLREGIDAVESEMALLHD
VIQTKDNGLQKLKRETDRLRRDIKRLQVEGEEHKGQENAMIVAASQNTRL
LKLLEQEELKREDVLAERDTALAEVKELKHRTRTSDERHAERTAGLEVKL
LKALAENTALNKKYSGTGEKILQLEKDLESIREQSTFDRETARAELRRHR
QSHYGILSQLQGATDELQRTKDEVEGRAQALQVCRRQSAELEMRLGTVQS
DLCTTERRSTEREVRSDGDARIAAARLSKERCLSESLENKVACMSRTVLR
LVERHKELQTEVDGHRNEEKRLKAHIERLGERELRLQQQMVRLESRQSVE
VTHRRLHGAIDTFNSQMMIPLTPAACDESKSSGCAETLPYGRQQLLFKFI
ALFRLVSGQGAATLVKGVAEELNLSDCGLQDAEVDEVMGLVCSCPRLACL
DLSMNTIGDGGAASIAQALRQPSCCLRKIDLRGNQMSMEGVRVLAKALQE
NVSRGVSHVYVHNEGRIDALARQRGEDIKNINTEGNNQAETEQDAAASFV
SVAVVDVRNNKPPITNTSARKTVLPVTSRGKRQGGSLGLAVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt