prot_M-pyrifera_M_contig71193.16980.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig71193.16980.1
Unique Name	prot_M-pyrifera_M_contig71193.16980.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	287

Homology

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BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Match: J9I8E7_9SPIT (MYND finger family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I8E7_9SPIT)

HSP 1 Score: 82.8 bits (203), Expect = 2.940e-14
Identity = 87/323 (26.93%), Postives = 137/323 (42.41%), Query Frame = 0

Query:    2 VGTLRWPIDHVYGDVP---VEERECVIGPNLGWGKWLGTRLGGRGVGMDGDVIGCVKDERGGWKVHPSVVDGLSWALTAELGLEKVGWTPAWPKEEKGVEGVVTFVLMGGSWNVEQRI---VKYFRELRPWAMGKGIQHLRVVVVGPE-ARSLSPKQVWI----------GGV------KGLGEEWLRGEGCAFQDSPS-STVFMLFNPGFGNTNIALRQAWAPTLVSLLDSNASILIACANDHG-----------DLAGEVPILQSVLHAK--FLLPPTKNPFPAASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK 287
            VGT RW       ++P    E R  +   N GW  +LG R          + I   + +     + P  +DGLS+++T    + K+     + KE       VT V+MGG+   E+RI     Y+ EL  +         +   VGPE + S + K   +          G +      +G+  E L  +       P  ST F+ +NPGFG+    L  +W   L+ L++ N  +  + AND+            DL GE  + Q +   K  ++L P +NPF AA+ +           E +K   WSC+N+ FY I+G+K
Sbjct:   98 VGTFRWNDSVNLVNIPQFKAEYRVLLKTLNEGWQTYLGLRF---------EEIANEQTQE--INIQPHQLDGLSFSMTLVNLIMKLR---LFLKEN------VTIVVMGGTAKAEERIFVQTNYYEELTNFFPKTSF---KFYFVGPELSNSRNQKSFKVNERLDGFFHKGQISEFLIDQGINPESLENDEIIKSKFPQDSTFFIGYNPGFGSGYDLLLNSWCVDLIQLINLNLPVCFSQANDYSVTNFRVVNDLQDLRGETRVFQVIFEGKVNYVLEPQENPFRAATHY---------HEEGKKETSWSCSNTHFYGIKGWK 388

[Close]

BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Match: J9HNG3_9SPIT (Zinc finger MYND domain-containing protein 17 n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HNG3_9SPIT)

HSP 1 Score: 72.8 bits (177), Expect = 6.190e-11
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0

Query:  184 FNPGFGNTNIALRQAWAPTLVSLLDSNASILIACANDHGDLAGEVPILQSVLHAK--FLLPPTKNPFPAASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK 287
            +NPGFG+    L  +W   L+SL++ N  +  + AND+ DL GE  + Q +   K  ++  P +NPF AA+ +           E +K   WSC+N+ FY I+G+K
Sbjct:  237 YNPGFGSGYDLLLNSWCVDLISLVNLNLPVCFSQANDYSDLRGETRVFQVIFEGKVNYVFEPQENPFRAATHY---------HEEGKKETSWSCSNTHFYGIKGWK 333

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
J9I8E7_9SPIT	2.940e-14	26.93	MYND finger family protein n=1 Tax=Oxytricha trifa...	[more]
J9HNG3_9SPIT	6.190e-11	34.91	Zinc finger MYND domain-containing protein 17 n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28069	FAMILY NOT NAMED	coord: 174..285

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig71193	contig	M-pyrifera_M_contig71193:175..1158 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig71193.16980.1	mRNA_M-pyrifera_M_contig71193.16980.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig71193 172..1158 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig71193.16980.1 ID=prot_M-pyrifera_M_contig71193.16980.1|Name=mRNA_M-pyrifera_M_contig71193.16980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
MVGTLRWPIDHVYGDVPVEERECVIGPNLGWGKWLGTRLGGRGVGMDGDV
IGCVKDERGGWKVHPSVVDGLSWALTAELGLEKVGWTPAWPKEEKGVEGV
VTFVLMGGSWNVEQRIVKYFRELRPWAMGKGIQHLRVVVVGPEARSLSPK
QVWIGGVKGLGEEWLRGEGCAFQDSPSSTVFMLFNPGFGNTNIALRQAWA
PTLVSLLDSNASILIACANDHGDLAGEVPILQSVLHAKFLLPPTKNPFPA
ASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK