prot_M-pyrifera_M_contig71175.16976.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71175.16976.1
Unique Nameprot_M-pyrifera_M_contig71175.16976.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length40
Homology
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 5.140e-14
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            N VILATAGYDHKIHFW+PPSG+C  TLRFSDSQV+
Sbjct:    2 NEVILATAGYDHKIHFWEPPSGECRSTLRFSDSQVN 37          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.010e-13
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            N+VILATAGYDHK++FW+PPSG C RTLR+SDSQV+
Sbjct:    2 NSVILATAGYDHKVNFWEPPSGVCSRTLRYSDSQVN 37          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: K8Z5Y7_NANGC (Wd40 component of tor1 and tor2 kinase complex (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5Y7_NANGC)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-11
Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    2 DKTNAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            + ++AV+LATAGYDHKI FW+ P+G C R++R+ DSQV+
Sbjct:    1 EMSSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQVN 39          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A6U2PBM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBM4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.390e-10
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            +VILATAGYDHKI FW+ PSG C RTLR+ DSQV+
Sbjct:    2 SVILATAGYDHKIRFWEAPSGICSRTLRYPDSQVN 36          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A4D9DF34_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF34_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.300e-9
Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    4 TNAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            ++AV+LATAGYDHKI FW+ P+G C R++R+ DSQV+
Sbjct:    2 SSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQVN 38          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A4Y7L320_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L320_PAPSO)

HSP 1 Score: 58.5 bits (140), Expect = 2.590e-9
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            +VILATAGYDH I FW+P SG C RTL++ DSQ++
Sbjct:   92 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQIN 126          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A7S3LCW6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCW6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.730e-9
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            +V+LAT GYDHKI FW+ PSG C R ++FSDSQV+
Sbjct:    2 SVVLATGGYDHKICFWEAPSGKCQRVIKFSDSQVN 36          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A7S4MAT8_9EUKA (Target of rapamycin complex subunit LST8 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MAT8_9EUKA)

HSP 1 Score: 58.5 bits (140), Expect = 6.040e-9
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    4 TNAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            T+ V+LATAGYDH I FW+ PSG C RTL+  DSQV+
Sbjct:    5 TSQVLLATAGYDHTIRFWEAPSGHCTRTLQHPDSQVN 41          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: UPI000E6F71D0 (target of rapamycin complex subunit LST8 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F71D0)

HSP 1 Score: 58.5 bits (140), Expect = 6.080e-9
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            +VILATAGYDH I FW+P SG C RTL++ DSQ++
Sbjct:    5 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQIN 39          
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Match: A0A2D4BTR3_PYTIN (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTR3_PYTIN)

HSP 1 Score: 57.8 bits (138), Expect = 1.120e-8
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS 40
            AV+LATAGYDH I FWD  SG C RT++++DSQV+
Sbjct:    3 AVVLATAGYDHTIRFWDAASGTCNRTVKYADSQVN 37          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71175.16976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI5.140e-1483.33WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA7.010e-1377.78WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
K8Z5Y7_NANGC1.400e-1158.97Wd40 component of tor1 and tor2 kinase complex (Fr... [more]
A0A6U2PBM4_9STRA3.390e-1074.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9DF34_9STRA1.300e-962.16Target of rapamycin complex subunit LST8 n=3 Tax=M... [more]
A0A4Y7L320_PAPSO2.590e-965.71Uncharacterized protein n=1 Tax=Papaver somniferum... [more]
A0A7S3LCW6_9STRA4.730e-965.71Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4MAT8_9EUKA6.040e-964.86Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
UPI000E6F71D06.080e-965.71target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
A0A2D4BTR3_PYTIN1.120e-865.71Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..40
e-value: 4.2E-7
score: 31.5
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71175contigM-pyrifera_M_contig71175:125..244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71175.16976.1mRNA_M-pyrifera_M_contig71175.16976.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71175 125..244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71175.16976.1 ID=prot_M-pyrifera_M_contig71175.16976.1|Name=mRNA_M-pyrifera_M_contig71175.16976.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=40bp
MDKTNAVILATAGYDHKIHFWDPPSGDCLRTLRFSDSQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf