mRNA_M-pyrifera_M_contig71153.16968.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71153.16968.1
Unique NamemRNA_M-pyrifera_M_contig71153.16968.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A2E3MGS9_9GAMM (Cysteine--tRNA ligase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MGS9_9GAMM)

HSP 1 Score: 513 bits (1322), Expect = 6.690e-179
Identity = 248/371 (66.85%), Postives = 296/371 (79.78%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGADLDVAQ---IEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T R I++  ED  KL +LPPD+EP+AT H+AE+I MIE LI K  AYV  NGDV Y+V KF NYG ++HKNI++LQ GAR+AI E+K NPLDFVLWK AKP+EP+WDSPWGKGRPGWHIECSAMST CLG +FDIHGGG DLKFPHHENEIAQSEAAT K F N WIH G VT+++EKMSKSLGNFFTI+EVLEKY  E VRYF++SSHYRSPVNYSQESLEIA GAL RFYTTLRGL    + + +E+E RF  AMDDDFN+P ALAV+FDITH+INR R+++ + AA LGALL KLGGV G+L +  E++LQ  A  D      IE LIA+RN A+A K+WA AD++RD L + G+ LEDG++GT WR+
Sbjct:   88 TERMIKSGEEDYAKLGILPPDNEPRATMHMAEMIAMIEALINKGFAYVGGNGDVFYDVRKFDNYGALSHKNIDELQVGARMAIDEAKNNPLDFVLWKMAKPNEPSWDSPWGKGRPGWHIECSAMSTTCLGENFDIHGGGMDLKFPHHENEIAQSEAATGKTFANLWIHSGLVTINREKMSKSLGNFFTIKEVLEKYKAETVRYFLMSSHYRSPVNYSQESLEIAEGALVRFYTTLRGLQSGLAPENSEYETRFQIAMDDDFNTPEALAVMFDITHKINRVRETEPEHAANLGALLSKLGGVFGLLDQQPEAFLQAPAAEDAISADAIEALIAERNQARADKNWARADEIRDELIAHGVALEDGAKGTTWRR 458          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A3M1DSX5_9GAMM (Cysteine--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DSX5_9GAMM)

HSP 1 Score: 501 bits (1291), Expect = 3.300e-174
Identity = 238/373 (63.81%), Postives = 287/373 (76.94%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQ----GGADLDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRKA 1107
            T RFI AM EDA  L VLPPD +P+AT+HI EII MI+ LI + +AYV  NGDV Y+V+ F  YG+++ KN E+L+AGARV + ESK +PLDFVLWK AKP EP+WDSPWG GRPGWHIECSAMST CLG HFDIHGGG DL+FPHHENEIAQSE AT +PFVN W+H GFV VD+EKMSKSLGNFFT+REVL +Y PEV+R+F++SSHYRSP+NYS+E+LE A GAL R YT LRGLP      +  + ERF  AMDDDFN+P ALAVLFD+ HEINR RD D D A  LG  LR LGGVLG+L ED E +L+     G  L   +IE+L+A+R+AA+  +DWA +D++RD L   G++LEDG  GT WR+A
Sbjct:   87 TDRFIRAMEEDAAALGVLPPDEQPRATEHIDEIIAMIQALIDRGLAYVGENGDVYYDVSAFEGYGRLSGKNPEELRAGARVEVEESKDDPLDFVLWKRAKPGEPSWDSPWGPGRPGWHIECSAMSTSCLGNHFDIHGGGQDLQFPHHENEIAQSEGATGEPFVNIWMHNGFVRVDEEKMSKSLGNFFTVREVLARYRPEVIRFFILSSHYRSPLNYSEENLENARGALARLYTALRGLPRGNGTLEQSYVERFTEAMDDDFNTPEALAVLFDLAHEINRVRDRDPDRAVVLGDTLRSLGGVLGLLQEDPEQFLKEGTAAGGGLSNEEIERLVAERSAARERRDWAESDRIRDRLKEAGVVLEDGPGGTTWRRA 459          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A7C1UQQ1_9GAMM (Cysteine--tRNA ligase n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1UQQ1_9GAMM)

HSP 1 Score: 498 bits (1282), Expect = 8.230e-173
Identity = 245/372 (65.86%), Postives = 287/372 (77.15%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGAD----LDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI+AMHEDA  L +LPP  EP+AT HI EI+ MI+TLI +  AYVA NGDV Y V++F  YGK++ K+ EDL+AGARV + E+KR+PLDFVLWK AKP EP WDSPWG+GRPGWHIECSAMST CLG HFDIHGGG DL+FPHHENEIAQSE AT + FVNYW+H GFV +++EKMSKSLGNFFT+RE+LE+Y PE VRYF+++S YRSP+NY  E L+ A  AL RFYT LRGLP AE A    F ERF  AMDDDFN+P ALAVLFD+  EINR RD D   AAGLGA LR+LGGVLGIL +D E YL+GGA     L   QIE+L+  R  A+ AKDWA AD++RD L + GIILEDG   T WR+
Sbjct:   89 TGRFIQAMHEDAQALGILPPTREPRATRHIKEILDMIQTLIDRGYAYVADNGDVYYAVSRFEGYGKLSGKDPEDLRAGARVEVGEAKRDPLDFVLWKAAKPGEPAWDSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREILERYRPEEVRYFILTSQYRSPLNYDDEHLDNARAALTRFYTALRGLPGAEPAGGEAFRERFRQAMDDDFNTPEALAVLFDLAREINRVRDEDEARAAGLGAQLRRLGGVLGILQDDPEQYLRGGAGEAAGLTDEQIERLLQKRIQARKAKDWAEADRIRDELQAAGIILEDGPGTTTWRR 460          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: D3RNB3_ALLVD (Cysteine--tRNA ligase n=5 Tax=Allochromatium TaxID=85072 RepID=D3RNB3_ALLVD)

HSP 1 Score: 495 bits (1274), Expect = 1.350e-171
Identity = 239/372 (64.25%), Postives = 287/372 (77.15%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGADLDV---AQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRKA 1107
            T RFI+AM ED+  L VLPP  EP+AT HI EI+ M++TLI K +AYVA NGDV Y V++F +YGK++ K+  DL+AG+RV I ESKR+PLDF LWK AKP EP WDSPWG GRPGWHIECSAMST CLG HFDIHGGG DL+FPHHENEIAQSE AT +PFVN W+H GFV V++EKMSKSLGNFFT+RE+L  Y PE VRYF+++SHYRSP+NY   +L+ A  AL R YT LRGLPEA  A+   F  RF +AMDDDFN+P ALAVLF++  EINR R    D AA  GALLR+LG  LG+L +D E YL+GGAD D    A+IE +IA R AA+A +DWA AD+LR+ LT+ GI+LEDG +GT WR+A
Sbjct:   89 TERFIQAMREDSEALGVLPPTDEPRATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGESKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILRLYRPEEVRYFILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEAAPAEGEAFRARFQAAMDDDFNTPEALAVLFELAREINRLRSDGSDQAAAHGALLRELGAALGLLQDDPERYLRGGADADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLEDGPQGTTWRRA 460          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: W0E3A0_MARPU (Cysteine--tRNA ligase n=7 Tax=Marichromatium TaxID=85076 RepID=W0E3A0_MARPU)

HSP 1 Score: 495 bits (1274), Expect = 1.400e-171
Identity = 238/373 (63.81%), Postives = 292/373 (78.28%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDS-DLDSAAGLGALLRKLGGVLGILTEDAESYLQGGAD----LDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI AMHEDA  L VL P SEP+AT HI EI TM+ TLI K +AY A NGDV Y V++F  YGK++ K+ +DL+AGARV + E+KR+PLDF LWK AKP EP+W SPWG+GRPGWHIECSAMST CLG HFDIHGGG DL+FPHHENEIAQSE AT +PF   W+H GFV +++EKMSKSLGNFFT+REVLE++  E +RYF+++SHYRSP+NY+ E L+ A GAL R YT LRGLPEAE+  ++ F  RF +AMDDDFN+P ALAVLF++  E+NR RD+ + + AA LGA LR+LGGV+GIL +D E YL+GG      LD A IE +IA R AA+AA+DWA AD+LRD LT  GI+LEDG++GT WR+
Sbjct:   89 TERFIAAMHEDAAALGVLAPTSEPRATAHIDEIQTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSGKDPQDLRAGARVEVDEAKRDPLDFALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREVLERFRAEEIRYFILTSHYRSPLNYADEQLQSARGALTRLYTALRGLPEAEAPAESAFATRFTAAMDDDFNTPEALAVLFELAREVNRARDAGEPEQAAALGAELRRLGGVIGILQDDPERYLRGGDGGTDGLDDAAIESMIAQRQAARAARDWAEADRLRDALTEAGIVLEDGAQGTTWRR 461          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: UPI00190623D5 (cysteine--tRNA ligase n=1 Tax=Thiocystis violacea TaxID=13725 RepID=UPI00190623D5)

HSP 1 Score: 494 bits (1273), Expect = 1.910e-171
Identity = 238/371 (64.15%), Postives = 291/371 (78.44%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGAD---LDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI AMHED+  L VLPP  EP+ATDH+ EI+ M+ TL++K +AY A NGDV + V +F  YGK++ K+ +DL+AG+RV + E+KR+PLDF LWK AKPDEP WDSPWG GRPGWHIECSAMST  LG HFDIHGGG DL+FPHHENEIAQSE AT +PFVN W+H GFV V++EKMSKSLGNFFT+RE+L++Y PE VRYF+++S YRSP+NY  E L+ A GAL R YT LRGLPE+  A    F ERF +AMDDDFN+P ALAVLFD+  EINR R+ D   AA LGA LR LGGVLGIL +DAE++L+G +    L  A+I+ LIA R AA+AAK+WA AD++RD+LT  GI+LEDGS+GT WR+
Sbjct:   89 TERFIAAMHEDSDALGVLPPTDEPRATDHMGEILQMVATLVEKGLAYEAGNGDVYFAVGRFQGYGKLSGKDPQDLRAGSRVEVGEAKRDPLDFALWKAAKPDEPAWDSPWGLGRPGWHIECSAMSTCALGNHFDIHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEVRYFILTSQYRSPLNYDDEHLQNARGALTRIYTALRGLPESSPAHGDAFRERFSAAMDDDFNTPEALAVLFDLVREINRIRNDDPLRAAALGAQLRALGGVLGILQDDAEAFLRGDSKAGALQDAEIDDLIAQRKAARAAKNWAEADRIRDLLTESGILLEDGSQGTAWRR 459          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A4E0R413_9GAMM (Cysteine--tRNA ligase n=1 Tax=Candidatus Thiomargarita nelsonii TaxID=1003181 RepID=A0A4E0R413_9GAMM)

HSP 1 Score: 494 bits (1271), Expect = 3.240e-171
Identity = 236/370 (63.78%), Postives = 293/370 (79.19%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTE--FEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGADLDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFIEAMHEDA  L VL PD EP+A+D I EII+M++ L+ KD AY+  NGDV Y V +FANYGK++ K +EDL+AG RV + +SK++PLDFVLWK AKP+EP+WDSPWG+GRPGWHIECSAMST CLG HFDIHGGG DL+FPHHENEIAQSE AT +PFVN W+H GFV ++ EKMSKSLGNFFT+REVLE+Y PEVVRYF+++SHYRSP+NYS + LE A  AL R YT LRGLP++  A   E  + +RF +AMDDDFN+P ALA+LF+++HEIN+ RD  L  AA LG  LR+LGG+LG+L  D E+YLQG  D +  +IE+LI +R AA+  +DWA AD++R  L   GI+LEDG+EGT WR+
Sbjct:   89 TARFIEAMHEDADALGVLRPDLEPRASDSIPEIISMVQDLLDKDYAYLTDNGDVCYAVQRFANYGKLSGKRLEDLRAGERVVVDQSKQHPLDFVLWKKAKPNEPSWDSPWGQGRPGWHIECSAMSTTCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRINDEKMSKSLGNFFTVREVLERYQPEVVRYFILTSHYRSPLNYSDQELESAKHALNRLYTALRGLPDSSGAGGGEGDYNQRFNAAMDDDFNTPEALAILFELSHEINKMRD--LSQAAQLGGELRRLGGILGLLQADPEAYLQG-TDQENEEIERLIGERQAARKGRDWARADQIRAQLKEQGIVLEDGAEGTIWRR 455          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A2N6CRW0_9GAMM (Cysteine--tRNA ligase n=2 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A2N6CRW0_9GAMM)

HSP 1 Score: 494 bits (1271), Expect = 3.720e-171
Identity = 241/371 (64.96%), Postives = 281/371 (75.74%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGAD---LDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI+AMHED+  L +L PDSEP+AT HIAEII MIE L+    AYVA N DV Y V  FA+YGK++ K +EDLQAGARV + + KRNPLDFVLWK AKP EP+WDSPWG GRPGWHIECSAMST CLG  FDIHGGG DL FPHHENEIAQSE AT KPFVNYW+H GFV ++ EKMSKSLGNFFT+RE+L +Y  E VRYF+++S YRSP+NY  E L+ A GAL RFYT +RGLP AE A    F ERF  AMDDDFN+P ALAVLFD+  EINR R  ++D AA L A LR+LGGVLGIL +D E YL+GG +   L   QI+ LI  R+ AKA K+W  ADK+RD L   G++LEDG +GT WR+
Sbjct:   89 TERFIQAMHEDSAALGILMPDSEPRATAHIAEIIAMIERLVANGHAYVADNRDVYYSVGSFADYGKLSGKTLEDLQAGARVEVDDQKRNPLDFVLWKSAKPGEPSWDSPWGGGRPGWHIECSAMSTCCLGDTFDIHGGGADLTFPHHENEIAQSEGATGKPFVNYWMHNGFVRINDEKMSKSLGNFFTVREILARYQAEEVRYFILTSQYRSPLNYDDEHLDNARGALTRFYTAMRGLPAAEPAGGEGFVERFHEAMDDDFNTPEALAVLFDLVREINRLRSEEVDRAAALAAELRRLGGVLGILQDDPEHYLRGGVEESGLSDDQIDGLIRQRHTAKAEKNWVEADKIRDQLKDQGVVLEDGPQGTTWRR 459          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A6M0JXZ8_9GAMM (Cysteine--tRNA ligase n=2 Tax=Thiorhodococcus TaxID=57488 RepID=A0A6M0JXZ8_9GAMM)

HSP 1 Score: 493 bits (1270), Expect = 5.280e-171
Identity = 240/371 (64.69%), Postives = 289/371 (77.90%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGGADLDV---AQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI AMH+DA  L VLPP  EP+AT H+ EI+ M++ LI + +AYVA NGDV + V++F +YGK++ K+ +DL+AGARV I E+KR+PLDF LWK AKPDEP WDSPWG+GRPGWHIECSAMST  LG HFDIHGGG DL+FPHHENEIAQSE AT +PFVN W+H GFV V++EKMSKSLGNFFT+RE+L++Y PE VRYF+++SHYRSP+NY  E L+ A GAL R YT LRGLP AE A    F ERF +AMDDDFN+PVAL+VLFD+  EINR RD D   AA LGA LR LGGVLGIL  D E +L+G +  D    A+I+ LI  R AA+AAK+WA AD++RD LT  GIILEDG+ GT WR+
Sbjct:   89 TERFIAAMHQDAEALGVLPPTDEPRATGHMGEILGMVQALIGRGLAYVADNGDVYFAVSQFPDYGKLSGKHPQDLRAGARVEIGEAKRDPLDFALWKAAKPDEPAWDSPWGRGRPGWHIECSAMSTCALGSHFDIHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQRYRPEEVRYFILTSHYRSPLNYDDEHLQGARGALTRIYTALRGLPAAEPAGGASFRERFSAAMDDDFNTPVALSVLFDLVREINRVRDEDGARAAALGAELRGLGGVLGILQSDPEVFLRGESTSDGLSDAEIDALIEQRRAARAAKNWAEADRVRDQLTQAGIILEDGASGTTWRR 459          
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Match: A0A558D171_9GAMM (Cysteine--tRNA ligase n=2 Tax=Sedimenticola TaxID=349742 RepID=A0A558D171_9GAMM)

HSP 1 Score: 491 bits (1265), Expect = 3.030e-170
Identity = 239/371 (64.42%), Postives = 282/371 (76.01%), Query Frame = 1
Query:    1 TTRFIEAMHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYEVTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWDSPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAATDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMISSHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAMDDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTEDAESYLQGG---ADLDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIILEDGSEGTKWRK 1104
            T RFI AMHED+  L +L PDSEP+AT HIAEI++MIE LI+K  AYVA N DV Y V  F  YGK++ K++EDLQAGARV + + KRNPLDFVLWK AKP EP+WDSPWG+GRPGWHIECSAMST CLG  FDIHGGG DL FPHHENEIAQSE AT KPFVNYW+H GFV ++ EKMSKSLGNFFT+RE+L +Y  E VRYF+++S YRSP+NY  E L+ A GAL RFYT +RGLPEA  A + ++ ERF +AMDDDFN+P ALAVLFD+  EINR R  D   AA L A LR+LGGVLGIL +D E YL+GG   + L   +IE LI  R  AK  K+WA AD+LRD L   G++LED  +GT WR+
Sbjct:   89 TERFITAMHEDSDALGILSPDSEPRATSHIAEILSMIERLIEKGHAYVADNRDVYYSVGSFEGYGKLSGKSLEDLQAGARVDVDDQKRNPLDFVLWKAAKPGEPSWDSPWGEGRPGWHIECSAMSTCCLGDTFDIHGGGADLTFPHHENEIAQSEGATGKPFVNYWMHNGFVRINDEKMSKSLGNFFTVREILARYQAEEVRYFILTSQYRSPLNYDDEHLDNARGALTRFYTAMRGLPEAAPAAEGDYAERFNAAMDDDFNTPEALAVLFDLVREINRVRHEDTGHAASLVAELRRLGGVLGILQDDPEQYLRGGDLASGLSDDEIESLIHQRQEAKMGKNWAEADRLRDALKEQGVVLEDSPQGTTWRR 459          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71153.16968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MGS9_9GAMM6.690e-17966.85Cysteine--tRNA ligase n=1 Tax=Legionellales bacter... [more]
A0A3M1DSX5_9GAMM3.300e-17463.81Cysteine--tRNA ligase n=1 Tax=Gammaproteobacteria ... [more]
A0A7C1UQQ1_9GAMM8.230e-17365.86Cysteine--tRNA ligase n=1 Tax=Sedimenticola sp. Ta... [more]
D3RNB3_ALLVD1.350e-17164.25Cysteine--tRNA ligase n=5 Tax=Allochromatium TaxID... [more]
W0E3A0_MARPU1.400e-17163.81Cysteine--tRNA ligase n=7 Tax=Marichromatium TaxID... [more]
UPI00190623D51.910e-17164.15cysteine--tRNA ligase n=1 Tax=Thiocystis violacea ... [more]
A0A4E0R413_9GAMM3.240e-17163.78Cysteine--tRNA ligase n=1 Tax=Candidatus Thiomarga... [more]
A0A2N6CRW0_9GAMM3.720e-17164.96Cysteine--tRNA ligase n=2 Tax=Sedimenticola selena... [more]
A0A6M0JXZ8_9GAMM5.280e-17164.69Cysteine--tRNA ligase n=2 Tax=Thiorhodococcus TaxI... [more]
A0A558D171_9GAMM3.030e-17064.42Cysteine--tRNA ligase n=2 Tax=Sedimenticola TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71153contigM-pyrifera_M_contig71153:51..1160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score487.6
Seed ortholog evalue4.9e-135
Seed eggNOG ortholog1218352.B597_019890
Preferred namecysS
KEGG rclassRC00055,RC00523
KEGG koko:K01883,ko:K15526
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065
EggNOG free text desc.Belongs to the class-I aminoacyl-tRNA synthetase family
EggNOG OGs1MV8H@1224,1RP5K@1236,1Z1XV@136846,COG0215@1,COG0215@2
EC6.1.1.16,6.3.1.13
COG Functional cat.J
BiGG ReactioniECUMN_1333.ECUMN_0566,iJN746.PP_2905
Best tax levelPseudomonas stutzeri group
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size1110
Cds size1089
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.7621052-CDS-M-pyrifera_M_contig71153:50..11391622816605.7621052-CDS-M-pyrifera_M_contig71153:50..1139Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71153 51..1139 -
1692278073.3104663-CDS-M-pyrifera_M_contig71153:50..11391692278073.3104663-CDS-M-pyrifera_M_contig71153:50..1139Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71153 51..1139 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.7728379-UTR-M-pyrifera_M_contig71153:1139..11601622816605.7728379-UTR-M-pyrifera_M_contig71153:1139..1160Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig71153 1140..1160 -
1692278073.3227723-UTR-M-pyrifera_M_contig71153:1139..11601692278073.3227723-UTR-M-pyrifera_M_contig71153:1139..1160Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig71153 1140..1160 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71153.16968.1prot_M-pyrifera_M_contig71153.16968.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71153 51..1139 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71153.16968.1

>prot_M-pyrifera_M_contig71153.16968.1 ID=prot_M-pyrifera_M_contig71153.16968.1|Name=mRNA_M-pyrifera_M_contig71153.16968.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=363bp
MHEDATKLNVLPPDSEPKATDHIAEIITMIETLIKKDMAYVASNGDVLYE
VTKFANYGKMAHKNIEDLQAGARVAITESKRNPLDFVLWKPAKPDEPNWD
SPWGKGRPGWHIECSAMSTQCLGPHFDIHGGGNDLKFPHHENEIAQSEAA
TDKPFVNYWIHIGFVTVDKEKMSKSLGNFFTIREVLEKYHPEVVRYFMIS
SHYRSPVNYSQESLEIASGALERFYTTLRGLPEAESAQKTEFEERFVSAM
DDDFNSPVALAVLFDITHEINRTRDSDLDSAAGLGALLRKLGGVLGILTE
DAESYLQGGADLDVAQIEKLIADRNAAKAAKDWANADKLRDVLTSMGIIL
EDGSEGTKWRKA*
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mRNA from alignment at M-pyrifera_M_contig71153:51..1160-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71153.16968.1 ID=mRNA_M-pyrifera_M_contig71153.16968.1|Name=mRNA_M-pyrifera_M_contig71153.16968.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig71153:51..1160- (Macrocystis pyrifera P11B4 male)
ACCACACGTTTTATTGAAGCTATGCATGAAGACGCAACGAAACTTAATGT TTTACCACCCGATAGCGAACCGAAAGCCACTGACCATATTGCTGAAATTA TCACAATGATTGAAACGTTGATAAAAAAAGACATGGCTTACGTGGCAAGT AACGGTGATGTGTTGTATGAAGTGACCAAGTTTGCCAACTACGGCAAGAT GGCGCATAAAAATATTGAAGATTTGCAAGCGGGTGCACGAGTTGCGATTA CTGAAAGTAAACGCAATCCATTAGACTTTGTATTGTGGAAGCCAGCAAAA CCAGATGAACCCAATTGGGATTCTCCGTGGGGTAAAGGACGTCCCGGTTG GCATATTGAATGCTCAGCAATGTCTACTCAGTGCTTGGGTCCACATTTTG ATATTCATGGTGGCGGAAATGATTTGAAGTTTCCACATCATGAAAATGAA ATTGCGCAATCAGAAGCAGCGACGGATAAACCATTTGTGAATTATTGGAT TCACATTGGCTTTGTCACCGTTGACAAAGAAAAGATGTCAAAATCATTAG GAAACTTTTTTACAATTCGAGAAGTGCTGGAAAAATATCATCCTGAAGTG GTTCGTTATTTCATGATTTCAAGCCATTACCGAAGCCCGGTGAATTACTC TCAAGAGTCATTGGAAATCGCGTCCGGTGCGTTGGAGCGATTCTATACCA CGCTACGCGGATTGCCAGAGGCTGAGTCTGCACAAAAGACTGAGTTTGAA GAACGCTTTGTGAGTGCTATGGATGATGATTTTAATTCACCTGTAGCATT AGCGGTGTTGTTTGATATCACGCATGAAATTAACCGCACGCGTGATAGCG ATCTTGATAGTGCCGCGGGCCTAGGTGCATTACTGCGTAAGCTTGGTGGC GTGTTAGGGATTTTAACCGAAGATGCTGAAAGCTATTTGCAAGGCGGAGC TGATTTAGATGTTGCGCAAATTGAAAAACTCATCGCGGATCGTAACGCCG CGAAAGCAGCGAAAGATTGGGCGAATGCGGATAAACTACGCGATGTGCTA ACCAGTATGGGCATTATACTTGAAGATGGATCAGAGGGGACCAAATGGCG TAAGGCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig71153:51..1160-

>mRNA_M-pyrifera_M_contig71153.16968.1 ID=mRNA_M-pyrifera_M_contig71153.16968.1|Name=mRNA_M-pyrifera_M_contig71153.16968.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2178bp|location=Sequence derived from alignment at M-pyrifera_M_contig71153:51..1160- (Macrocystis pyrifera P11B4 male)
ATGCATGAAGACGCAACGAAACTTAATGTTTTACCACCCGATAGCGAACC
GAAAGCCACTGACCATATTGCTGAAATTATCACAATGATTGAAACGTTGA
TAAAAAAAGACATGGCTTACGTGGCAAGTAACGGTGATGTGTTGTATGAA
GTGACCAAGTTTGCCAACTACGGCAAGATGGCGCATAAAAATATTGAAGA
TTTGCAAGCGGGTGCACGAGTTGCGATTACTGAAAGTAAACGCAATCCAT
TAGACTTTGTATTGTGGAAGCCAGCAAAACCAGATGAACCCAATTGGGAT
TCTCCGTGGGGTAAAGGACGTCCCGGTTGGCATATTGAATGCTCAGCAAT
GTCTACTCAGTGCTTGGGTCCACATTTTGATATTCATGGTGGCGGAAATG
ATTTGAAGTTTCCACATCATGAAAATGAAATTGCGCAATCAGAAGCAGCG
ACGGATAAACCATTTGTGAATTATTGGATTCACATTGGCTTTGTCACCGT
TGACAAAGAAAAGATGTCAAAATCATTAGGAAACTTTTTTACAATTCGAG
AAGTGCTGGAAAAATATCATCCTGAAGTGGTTCGTTATTTCATGATTTCA
AGCCATTACCGAAGCCCGGTGAATTACTCTCAAGAGTCATTGGAAATCGC
GTCCGGTGCGTTGGAGCGATTCTATACCACGCTACGCGGATTGCCAGAGG
CTGAGTCTGCACAAAAGACTGAGTTTGAAGAACGCTTTGTGAGTGCTATG
GATGATGATTTTAATTCACCTGTAGCATTAGCGGTGTTGTTTGATATCAC
GCATGAAATTAACCGCACGCGTGATAGCGATCTTGATAGTGCCGCGGGCC
TAGGTGCATTACTGCGTAAGCTTGGTGGCGTGTTAGGGATTTTAACCGAA
GATGCTGAAAGCTATTTGCAAGGCGGAGCTGATTTAGATGTTGCGCAAAT
TGAAAAACTCATCGCGGATCGTAACGCCGCGAAAGCAGCGAAAGATTGGG
CGAATGCGGATAAACTACGCGATGTGCTAACCAGTATGGGCATTATACTT
GAAGATGGATCAGAGGGGACCAAATGGCGTAAGGCTTGAATGCATGAAGA
CGCAACGAAACTTAATGTTTTACCACCCGATAGCGAACCGAAAGCCACTG
ACCATATTGCTGAAATTATCACAATGATTGAAACGTTGATAAAAAAAGAC
ATGGCTTACGTGGCAAGTAACGGTGATGTGTTGTATGAAGTGACCAAGTT
TGCCAACTACGGCAAGATGGCGCATAAAAATATTGAAGATTTGCAAGCGG
GTGCACGAGTTGCGATTACTGAAAGTAAACGCAATCCATTAGACTTTGTA
TTGTGGAAGCCAGCAAAACCAGATGAACCCAATTGGGATTCTCCGTGGGG
TAAAGGACGTCCCGGTTGGCATATTGAATGCTCAGCAATGTCTACTCAGT
GCTTGGGTCCACATTTTGATATTCATGGTGGCGGAAATGATTTGAAGTTT
CCACATCATGAAAATGAAATTGCGCAATCAGAAGCAGCGACGGATAAACC
ATTTGTGAATTATTGGATTCACATTGGCTTTGTCACCGTTGACAAAGAAA
AGATGTCAAAATCATTAGGAAACTTTTTTACAATTCGAGAAGTGCTGGAA
AAATATCATCCTGAAGTGGTTCGTTATTTCATGATTTCAAGCCATTACCG
AAGCCCGGTGAATTACTCTCAAGAGTCATTGGAAATCGCGTCCGGTGCGT
TGGAGCGATTCTATACCACGCTACGCGGATTGCCAGAGGCTGAGTCTGCA
CAAAAGACTGAGTTTGAAGAACGCTTTGTGAGTGCTATGGATGATGATTT
TAATTCACCTGTAGCATTAGCGGTGTTGTTTGATATCACGCATGAAATTA
ACCGCACGCGTGATAGCGATCTTGATAGTGCCGCGGGCCTAGGTGCATTA
CTGCGTAAGCTTGGTGGCGTGTTAGGGATTTTAACCGAAGATGCTGAAAG
CTATTTGCAAGGCGGAGCTGATTTAGATGTTGCGCAAATTGAAAAACTCA
TCGCGGATCGTAACGCCGCGAAAGCAGCGAAAGATTGGGCGAATGCGGAT
AAACTACGCGATGTGCTAACCAGTATGGGCATTATACTTGAAGATGGATC
AGAGGGGACCAAATGGCGTAAGGCTTGA
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