mRNA_M-pyrifera_M_contig71150.16966.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71150.16966.1
Unique NamemRNA_M-pyrifera_M_contig71150.16966.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: R4Z0A6_9ACTN (GGDEF domain-containing protein n=3 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4Z0A6_9ACTN)

HSP 1 Score: 422 bits (1084), Expect = 1.370e-142
Identity = 223/333 (66.97%), Postives = 265/333 (79.58%), Query Frame = 1
Query:    1 RLLAAVPSLVADDQTTLDEPVARQAISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPW 999
            R +A VPS   D     D    RQ+ISAG   YGEI+ +  G  L +DGRLA++RA+ AIA+R AHA+AAAAE+ERF ATSLEELI+G+A DIADV ERA SFGWDL RPRAVLL S+DP   RE   + LG IA AARATLG+D IVW RST++AAL+AP+++ P ERR +AERLR ELD +V  VTVSIGVGR VDDPM +P+SY EA RAVDVGRWAKGRH T VFD+LGLERLLASTP ++LA+FV  AIG L  YDR +D+DLV TLG+WLETRNMAEA+RR+++HYNT KNRLDRIE++ GP+LSD+ RSLEC VAIYVF+ YDGPW
Sbjct:  177 RTMAIVPSDALDGVDLADASWPRQSISAGQFDYGEIV-VPTGEGLKEDGRLAMQRASQAIAVRMAHASAAAAERERFEATSLEELIAGHAGDIADVTERAISFGWDLARPRAVLLASIDPPVDREVLPTVLGTIAAAARATLGADAIVWTRSTTIAALIAPETADPVERREMAERLRTELDNRVDQVTVSIGVGRRVDDPMAMPQSYQEAGRAVDVGRWAKGRHATAVFDQLGLERLLASTPTEELAEFVEHAIGPLAAYDRAHDSDLVETLGLWLETRNMAEASRRVNIHYNTFKNRLDRIESILGPLLSDAARSLECEVAIYVFQRYDGPW 508          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A2E0RVT3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RVT3_9ACTN)

HSP 1 Score: 419 bits (1078), Expect = 1.980e-141
Identity = 220/328 (67.07%), Postives = 260/328 (79.27%), Query Frame = 1
Query:   16 VPSLVADDQTTLDEPVARQAISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPW 999
            VPS    D  T      RQ I AGD  YG I+ + GG+ LD D  LALERA++AIA+R AHA+AAAAEQERFAATSLEELI+G+A D ADV ERA SFGWDL+RPRAVLL S+DP T  +   S+L  IA +ARATLG D IVW RS+++AAL+AP +  P ERRR+AE LR +LD+++  VT+SIGVG  VDD  + PRSYVEASRAVDVGRWAKG HVTEVFDELGLERLLASTP DDLA FV Q IG LV+YDR++ TDLV TLG+WLETRNMAEA+R +HVHYNT KNRLDRIE++ GP+++D+ R+LEC VAIY+ RHYDGPW
Sbjct:  195 VPSDAEIDTDTAVTSGVRQPILAGDQDYGAIVVVTGGSPLDADQLLALERASTAIAVRLAHASAAAAEQERFAATSLEELIAGHAGDTADVTERALSFGWDLSRPRAVLLASIDPPTNPDTLQSALATIAASARATLGRDAIVWTRSSTIAALVAPTTDEPAERRRLAETLRHDLDQRIRTVTISIGVGTRVDDSREFPRSYVEASRAVDVGRWAKGPHVTEVFDELGLERLLASTPTDDLAGFVEQTIGALVEYDRLHRTDLVETLGVWLETRNMAEASRMVHVHYNTFKNRLDRIESILGPIVTDAARALECEVAIYISRHYDGPW 522          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A6N7FUM8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FUM8_9ACTN)

HSP 1 Score: 354 bits (909), Expect = 4.480e-115
Identity = 201/347 (57.93%), Postives = 237/347 (68.30%), Query Frame = 1
Query:    1 RLLAAVPSLVADDQTTLDEPVARQAISAGDHHYGEILALAGGADLDDDGR--------------LALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPW 999
            R   AVP++  D      E   R  +   +   GE++A AG A                     LALE+AA+AI +R+A A A AA QERFAA SLEEL+SG+A   A+VVERA+SFGWDL RPRAVLL SVDP    +    ++  +A AARATLG D IVW R  +VAAL+AP +  P ERRRIA  L+ ELDE++   TVSIGVGR  D P  LP S+ EASRAVDVGRWAKGRHVTEVFDELGLERLLA+ P  +LA FV  AIG LVD+DR  D  LV TL  WL+ RNMAEAARR+HVHYNTLKNRL+RIEA+ GPVLSD  ++LEC VAI+V  +YDGPW
Sbjct:  238 RPTVAVPAIATDAGAVATEDGLRWPVGPAEEPEGEVVAWAGAAGTVGSPEAPQHEREVPRSVVLLALEQAATAIGVRRAQARAVAAAQERFAALSLEELVSGHAAQRAEVVERASSFGWDLHRPRAVLLASVDPRPEGDTPQGAVAVVAAAARATLGRDAIVWTRGQTVAALVAPLTDEPAERRRIALGLQHELDERLRRATVSIGVGRRADGPTGLPSSFAEASRAVDVGRWAKGRHVTEVFDELGLERLLAACPTSELAAFVQAAIGALVDHDRQRDGALVETLAAWLQARNMAEAARRVHVHYNTLKNRLERIEAIVGPVLSDPAKALECEVAIHVAGNYDGPW 584          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A349B2Y8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B2Y8_9ACTN)

HSP 1 Score: 315 bits (808), Expect = 2.160e-103
Identity = 164/259 (63.32%), Postives = 196/259 (75.68%), Query Frame = 1
Query:  223 ERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPW 999
            +R+A  +LEELIS +    A+ VERA S GWDL RPRAVLL S+DP    +     L  ++ AARATLG D IVW R+TSVAALL  D  +  +RR +A+ LREELDE+V  VT+SIGVGR V+DP+ L  S+V+A RAV+VGRWAKGRHVTE++DELGLERL AS P  DL DFV  AIG L+D+DR + T+LV TL MWLE RNMAEAAR++ VHYNT KNRL+RIEA+ GPVLSD  R LEC VAI+V RHYDGPW
Sbjct:   63 DRYATITLEELISADPGRAAEAVERAASLGWDLHRPRAVLLASIDPPVDPDVALQVLATVSAAARATLGDDAIVWTRATSVAALLVADDRSAAQRRLLADALREELDERVRNVTLSIGVGRSVEDPLLLSSSFVDAHRAVEVGRWAKGRHVTELYDELGLERLFASVPEQDLHDFVLHAIGPLLDHDRRHGTELVETLSMWLEARNMAEAARQMFVHYNTFKNRLERIEAILGPVLSDPSRLLECEVAIHVSRHYDGPW 321          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A0T5ZLN2_9CHLR (Transcriptional regulator CdaR, purine catabolism regulatory protein n=1 Tax=Chloroflexi bacterium CSP1-4 TaxID=1640513 RepID=A0A0T5ZLN2_9CHLR)

HSP 1 Score: 229 bits (584), Expect = 3.680e-67
Identity = 138/309 (44.66%), Postives = 182/309 (58.90%), Query Frame = 1
Query:   70 QAISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAR-----EHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFR 981
            Q I  G   YG ++ L G + + D+   ALE +A+  ALRQ  A A A    RF A  LEELI+G+  D   V+E A  FGWDL+ PRAVL+  V+          E  ++    +A AAR TLG + IVW RS  VAAL+AP +   +     A  L+ +   ++    VSIG+GR V+DP++L  S+ EA +A  +GRW+ G      F+ LGL+RLL S P  +   FV +A+G L++YDR + T LV TL  WL  RN A AAR L VHYNTLKNRLDRIEA+ GP L D  R LE A+A+ + R
Sbjct:  230 QPIRVGADRYGAVVVLGGLSSIGDEDLEALEYSATLTALRQVQARAVAEADRRFQAVCLEELITGHVADRGVVLEWAVEFGWDLSLPRAVLVADVESAAGARRPPGEEAAAQRHRLAEAARVTLGRNAIVWERSAEVAALVAPGARGGQGLEEAAAELQADARRRLPAAVVSIGIGRVVEDPLRLRDSHAEARQARAIGRWSHGPGAVARFEALGLDRLLVSAPEAEREAFVAEAVGPLLEYDRRHGTALVQTLERWLADRNGAHAARDLFVHYNTLKNRLDRIEALVGPFLEDPDRCLELALAVRLLR 538          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A2E0RW19_9ACTN (HTH_30 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RW19_9ACTN)

HSP 1 Score: 171 bits (432), Expect = 1.210e-49
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 1
Query:  688 DELGLERLLASTPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPW 999
            DELG+ERLLASTP DDLA FV Q IG LVD+DR++ TDLV TLG+WLETRNMAEA+RRLHVHYNT KNRLDRIE++ GPV+SD+ R+LEC VAIY+ RHYDGPW
Sbjct:    8 DELGVERLLASTPTDDLAGFVDQTIGALVDHDRLHRTDLVETLGIWLETRNMAEASRRLHVHYNTFKNRLDRIESILGPVVSDAARALECEVAIYISRHYDGPW 111          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A411YD17_9ACTN (PucR family transcriptional regulator n=2 Tax=Egibacter rhizosphaerae TaxID=1670831 RepID=A0A411YD17_9ACTN)

HSP 1 Score: 143 bits (360), Expect = 1.150e-34
Identity = 109/309 (35.28%), Postives = 159/309 (51.46%), Query Frame = 1
Query:   76 ISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSD--TIVWARSTSVAALL-APDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTP-ADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETR-NMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFRHY 987
            I AG   +G IL + G  +LD    +ALE AA+  AL      A AA + ++AA  L +LI+G   D  DV  RA++ GW L RP   L+ + +P         +    A    A L  D    V   S SV  L  APD++  +E RR+A  L  E  E      + IGV R VD  ++L  SY +A RA+ +GR   G      FD+LG +RLL+  P  ++L  F  + +G +   +  +D +L  TL + LE   N+A +ARRLHVHYNTL+ R+D++E + GP  SD    L+  + + +   +
Sbjct:  265 IRAGARLHGRILTVEGARELDAGDVIALENAATVAALVVTKEAAVAAVESKYAADFLHDLIAGRVADETDVATRASALGWQLDRPLVTLVAAPEPSAPGPDDDLTERTAAALRTAVLPGDPGAAVVPLSGSVVVLAGAPDTA--DETRRLASTLASEGRENAGR-PIGIGVSRPVDGALELATSYEQAERALRIGREIAGAGAVAHFDDLGADRLLSLIPDQEELRAFADEVLGPVAG-EAPDDRELRRTLLVLLEEHLNVAASARRLHVHYNTLRYRIDKLERLLGPFTSDPRLRLDLQLGLRILPRF 569          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A4R5BER5_9ACTN (PucR family transcriptional regulator n=2 Tax=Actinomadura rubrisoli TaxID=2530368 RepID=A0A4R5BER5_9ACTN)

HSP 1 Score: 142 bits (359), Expect = 1.660e-34
Identity = 110/324 (33.95%), Postives = 158/324 (48.77%), Query Frame = 1
Query:   49 LDE---PVARQAISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGA----IAVAARATLGSD----TIVWARSTSVAALLAPDSSAPEER-RRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTP-ADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFR 981
            LDE   PVA   + AG   +G I+ +AGG+ L+D     LERAA+  AL      A +A + ++    L +L++G   D    V    S GWD+ RP  VL+  ++P  A E     L +     A A R  +G       +V      V  + AP    P E  R++  RL     +  T    S G+ R V +P  LP++Y +A RA  VG    G    E FD LG+ RLL+  P   +L DF+ + +  L   D     DL  TL + L+T N+AE AR +H HYNTL+ RL ++E + GP  +D H  L   +A+ + R
Sbjct:  257 LDERGAPVAVVPVLAGSLDHGRIVLIAGGSPLEDSDVHVLERAAATAALVITKELAVSAVESKYRGDFLHDLLAGRVDDSEHAVRHCASLGWDIDRPLIVLVAQLEPGAAPEPSPRDLRSAHERFATAWRRAVGERDPRAAVVGYSQELVVVMGAPTGEPPGEAVRKMVARLP---GDGRTRRPFSTGISRIVTEPALLPQAYQQARRAATVGHRMHGPGSVEDFDSLGVYRLLSLVPDPTELTDFMRETLRDLAFGDDAETVDLRTTLQILLDTNNVAETARIMHFHYNTLRYRLAKLERLLGPFTTDPHLRLNLMLALQIQR 577          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: UPI001FE64FB7 (helix-turn-helix domain-containing protein n=1 Tax=Nonomuraea indica TaxID=1581193 RepID=UPI001FE64FB7)

HSP 1 Score: 136 bits (342), Expect = 6.530e-34
Identity = 104/323 (32.20%), Postives = 151/323 (46.75%), Query Frame = 1
Query:   76 ISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVDP--------------WTAREHQSSSLGAIA-----VAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLAST-PADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETR-NMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFR 981
            + A  HH+G I+A +    + D     LERAA+  AL      A  A + ++ A  L ++++G A     V  R+ +FGWDL RP  VL+  +DP              WTA   +    GA+A     V A     +DT   AR  + A   +P +++P                    VT S G  R       LP +Y +A +A  VGR   G      FD+LG+ RLL+     ++L  FV + +G L   D   ++DL  TL + LET  N+AE ARRLH HYNTL+ R+ ++E + G    D H  L   +A++V R
Sbjct:    4 VVAAGHHHGRIVAYSPAGAIRDSDIGILERAATVAALVVTRQEAVNAVESKYRADFLRDVLTGRAGSAERVATRSRAFGWDLERPVTVLVAEIDPDGDERSAQDRLVTSWTAAIRRHDPRGAVAGFSHEVVAVVGATADTARLARDAAAAFTDSPPAASPP-------------------VTFSTGTSRPCAGADTLPDAYAQALKAARVGRQLHGPGAVAHFDQLGVYRLLSLVNDTEELHAFVRETLGPLATDDDAENSDLRRTLQVLLETNLNVAETARRLHFHYNTLRYRIGKLERLLGGFTDDPHLRLNLTLALHVLR 307          
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Match: A0A7W0CPA1_9ACTN (Purine catabolism regulator n=2 Tax=Streptosporangiaceae TaxID=2004 RepID=A0A7W0CPA1_9ACTN)

HSP 1 Score: 140 bits (352), Expect = 9.250e-34
Identity = 104/318 (32.70%), Postives = 149/318 (46.86%), Query Frame = 1
Query:   76 ISAGDHHYGEILALAGGADLDDDGRLALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERANSFGWDLTRPRAVLLVSVD--------------PWTAREHQSSSLGAIAVAARATLGSDTIVWARSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDPMQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLAS-TPADDLADFVHQAIGTLVDYDRVNDTDLVMTLGMWLETR-NMAEAARRLHVHYNTLKNRLDRIEAVAGPVLSDSHRSLECAVAIYVFR 981
            + AG HH+G I+A +    + D     LERAA+  AL      A  A + ++ A  L ++++G A     +  RA +FGWDL RP  VL+  +D               WTA   +  S GA+A                S  V A+L   +   +  R  A    + L       T S G  R    P  LP +Y +A +A  VGR   G      FD+LG+ RLL+  +  D+L  FV + +G L   D   + DL  TL + LET  N+AE ARRLH HYNTL+ R+ ++E + G   +D H  L   +A++V R
Sbjct:  227 VVAGGHHHGRIVAHSPAGTIHDSDVGILERAATVAALVVTRQDAVNAVESKYRADFLRDVLTGRAGGAERITARARAFGWDLERPVTVLVAELDLFGEERTAQDRLVTAWTAALRRHDSRGAVA--------------GFSNEVVAVLDAGADCAKVARDAATAFTDALP-----ATFSTGTSRLCSRPEALPEAYAQALKAARVGRQLHGPAAVAHFDQLGVYRLLSLVSDTDELHAFVRETLGPLASDDDAENADLRRTLQVLLETNLNVAETARRLHFHYNTLRYRIGKLERLLGNFTADHHLRLNLTLALHVLR 525          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71150.16966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R4Z0A6_9ACTN1.370e-14266.97GGDEF domain-containing protein n=3 Tax=Candidatus... [more]
A0A2E0RVT3_9ACTN1.980e-14167.07Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A6N7FUM8_9ACTN4.480e-11557.93Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A349B2Y8_9ACTN2.160e-10363.32Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A0T5ZLN2_9CHLR3.680e-6744.66Transcriptional regulator CdaR, purine catabolism ... [more]
A0A2E0RW19_9ACTN1.210e-4976.92HTH_30 domain-containing protein n=1 Tax=Acidimicr... [more]
A0A411YD17_9ACTN1.150e-3435.28PucR family transcriptional regulator n=2 Tax=Egib... [more]
A0A4R5BER5_9ACTN1.660e-3433.95PucR family transcriptional regulator n=2 Tax=Acti... [more]
UPI001FE64FB76.530e-3432.20helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A7W0CPA1_9ACTN9.250e-3432.70Purine catabolism regulator n=2 Tax=Streptosporang... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71150contigM-pyrifera_M_contig71150:143..1159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score427.6
Seed ortholog evalue5.6e-117
Seed eggNOG ortholog1229780.BN381_130264
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transcriptional regulator
EggNOG OGs2GM1G@201174,COG2508@1,COG2508@2
COG Functional cat.QT
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size1017
Cds size1017
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.688308-CDS-M-pyrifera_M_contig71150:142..11591622816605.688308-CDS-M-pyrifera_M_contig71150:142..1159Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71150 143..1159 -
1692278073.2748053-CDS-M-pyrifera_M_contig71150:142..11591692278073.2748053-CDS-M-pyrifera_M_contig71150:142..1159Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71150 143..1159 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71150.16966.1prot_M-pyrifera_M_contig71150.16966.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71150 143..1159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71150.16966.1

>prot_M-pyrifera_M_contig71150.16966.1 ID=prot_M-pyrifera_M_contig71150.16966.1|Name=mRNA_M-pyrifera_M_contig71150.16966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp
RLLAAVPSLVADDQTTLDEPVARQAISAGDHHYGEILALAGGADLDDDGR
LALERAASAIALRQAHATAAAAEQERFAATSLEELISGNARDIADVVERA
NSFGWDLTRPRAVLLVSVDPWTAREHQSSSLGAIAVAARATLGSDTIVWA
RSTSVAALLAPDSSAPEERRRIAERLREELDEKVTLVTVSIGVGRCVDDP
MQLPRSYVEASRAVDVGRWAKGRHVTEVFDELGLERLLASTPADDLADFV
HQAIGTLVDYDRVNDTDLVMTLGMWLETRNMAEAARRLHVHYNTLKNRLD
RIEAVAGPVLSDSHRSLECAVAIYVFRHYDGPWIPATM*
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mRNA from alignment at M-pyrifera_M_contig71150:143..1159-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71150.16966.1 ID=mRNA_M-pyrifera_M_contig71150.16966.1|Name=mRNA_M-pyrifera_M_contig71150.16966.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1017bp|location=Sequence derived from alignment at M-pyrifera_M_contig71150:143..1159- (Macrocystis pyrifera P11B4 male)
CGACTGCTGGCGGCGGTGCCTTCGCTCGTGGCCGACGACCAGACGACCCT CGACGAACCGGTCGCTCGCCAGGCGATCTCGGCCGGTGACCATCATTACG GCGAGATCCTCGCGCTCGCCGGCGGCGCCGACCTCGACGACGACGGGCGC CTGGCACTGGAACGGGCGGCAAGCGCGATCGCGCTGCGGCAGGCGCACGC AACTGCGGCGGCGGCAGAACAGGAACGATTCGCCGCCACCTCGCTCGAGG AGTTGATCTCCGGCAATGCTCGCGACATCGCCGATGTGGTCGAGCGGGCC AACAGTTTCGGTTGGGACCTCACTCGTCCCCGTGCCGTGCTCCTGGTGTC GGTCGATCCGTGGACGGCGCGTGAACACCAGTCGTCGTCGCTCGGCGCCA TCGCCGTCGCCGCCCGGGCCACCCTCGGCAGCGACACGATCGTGTGGGCA CGGAGCACCTCGGTCGCTGCCCTTCTTGCGCCCGACTCCTCGGCCCCCGA GGAGCGAAGGCGAATTGCCGAACGACTCCGGGAGGAACTCGACGAGAAGG TGACGCTCGTGACGGTCAGCATCGGCGTCGGACGTTGTGTCGACGACCCG ATGCAATTGCCCCGCAGCTACGTCGAGGCCAGTCGAGCAGTCGACGTCGG AAGGTGGGCGAAGGGCCGTCACGTGACCGAGGTCTTCGACGAACTGGGGC TCGAGCGCCTCCTGGCATCGACCCCTGCCGACGACCTCGCCGACTTCGTG CACCAGGCGATCGGCACACTCGTCGACTACGACCGTGTGAACGACACCGA CCTCGTGATGACGCTCGGTATGTGGCTCGAGACCCGCAACATGGCCGAGG CAGCGCGAAGACTGCACGTCCACTACAACACGCTGAAGAACCGACTCGAT CGGATCGAAGCGGTCGCCGGGCCGGTGCTGAGCGACAGCCATCGGTCGCT CGAATGTGCGGTGGCCATCTACGTCTTCCGTCATTACGACGGGCCGTGGA TACCCGCCACCATGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig71150:143..1159-

>mRNA_M-pyrifera_M_contig71150.16966.1 ID=mRNA_M-pyrifera_M_contig71150.16966.1|Name=mRNA_M-pyrifera_M_contig71150.16966.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2034bp|location=Sequence derived from alignment at M-pyrifera_M_contig71150:143..1159- (Macrocystis pyrifera P11B4 male)
CGACTGCTGGCGGCGGTGCCTTCGCTCGTGGCCGACGACCAGACGACCCT
CGACGAACCGGTCGCTCGCCAGGCGATCTCGGCCGGTGACCATCATTACG
GCGAGATCCTCGCGCTCGCCGGCGGCGCCGACCTCGACGACGACGGGCGC
CTGGCACTGGAACGGGCGGCAAGCGCGATCGCGCTGCGGCAGGCGCACGC
AACTGCGGCGGCGGCAGAACAGGAACGATTCGCCGCCACCTCGCTCGAGG
AGTTGATCTCCGGCAATGCTCGCGACATCGCCGATGTGGTCGAGCGGGCC
AACAGTTTCGGTTGGGACCTCACTCGTCCCCGTGCCGTGCTCCTGGTGTC
GGTCGATCCGTGGACGGCGCGTGAACACCAGTCGTCGTCGCTCGGCGCCA
TCGCCGTCGCCGCCCGGGCCACCCTCGGCAGCGACACGATCGTGTGGGCA
CGGAGCACCTCGGTCGCTGCCCTTCTTGCGCCCGACTCCTCGGCCCCCGA
GGAGCGAAGGCGAATTGCCGAACGACTCCGGGAGGAACTCGACGAGAAGG
TGACGCTCGTGACGGTCAGCATCGGCGTCGGACGTTGTGTCGACGACCCG
ATGCAATTGCCCCGCAGCTACGTCGAGGCCAGTCGAGCAGTCGACGTCGG
AAGGTGGGCGAAGGGCCGTCACGTGACCGAGGTCTTCGACGAACTGGGGC
TCGAGCGCCTCCTGGCATCGACCCCTGCCGACGACCTCGCCGACTTCGTG
CACCAGGCGATCGGCACACTCGTCGACTACGACCGTGTGAACGACACCGA
CCTCGTGATGACGCTCGGTATGTGGCTCGAGACCCGCAACATGGCCGAGG
CAGCGCGAAGACTGCACGTCCACTACAACACGCTGAAGAACCGACTCGAT
CGGATCGAAGCGGTCGCCGGGCCGGTGCTGAGCGACAGCCATCGGTCGCT
CGAATGTGCGGTGGCCATCTACGTCTTCCGTCATTACGACGGGCCGTGGA
TACCCGCCACCATGTAGCGACTGCTGGCGGCGGTGCCTTCGCTCGTGGCC
GACGACCAGACGACCCTCGACGAACCGGTCGCTCGCCAGGCGATCTCGGC
CGGTGACCATCATTACGGCGAGATCCTCGCGCTCGCCGGCGGCGCCGACC
TCGACGACGACGGGCGCCTGGCACTGGAACGGGCGGCAAGCGCGATCGCG
CTGCGGCAGGCGCACGCAACTGCGGCGGCGGCAGAACAGGAACGATTCGC
CGCCACCTCGCTCGAGGAGTTGATCTCCGGCAATGCTCGCGACATCGCCG
ATGTGGTCGAGCGGGCCAACAGTTTCGGTTGGGACCTCACTCGTCCCCGT
GCCGTGCTCCTGGTGTCGGTCGATCCGTGGACGGCGCGTGAACACCAGTC
GTCGTCGCTCGGCGCCATCGCCGTCGCCGCCCGGGCCACCCTCGGCAGCG
ACACGATCGTGTGGGCACGGAGCACCTCGGTCGCTGCCCTTCTTGCGCCC
GACTCCTCGGCCCCCGAGGAGCGAAGGCGAATTGCCGAACGACTCCGGGA
GGAACTCGACGAGAAGGTGACGCTCGTGACGGTCAGCATCGGCGTCGGAC
GTTGTGTCGACGACCCGATGCAATTGCCCCGCAGCTACGTCGAGGCCAGT
CGAGCAGTCGACGTCGGAAGGTGGGCGAAGGGCCGTCACGTGACCGAGGT
CTTCGACGAACTGGGGCTCGAGCGCCTCCTGGCATCGACCCCTGCCGACG
ACCTCGCCGACTTCGTGCACCAGGCGATCGGCACACTCGTCGACTACGAC
CGTGTGAACGACACCGACCTCGTGATGACGCTCGGTATGTGGCTCGAGAC
CCGCAACATGGCCGAGGCAGCGCGAAGACTGCACGTCCACTACAACACGC
TGAAGAACCGACTCGATCGGATCGAAGCGGTCGCCGGGCCGGTGCTGAGC
GACAGCCATCGGTCGCTCGAATGTGCGGTGGCCATCTACGTCTTCCGTCA
TTACGACGGGCCGTGGATACCCGCCACCATGTAG
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