prot_M-pyrifera_M_contig7115.16965.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7115.16965.1
Unique Nameprot_M-pyrifera_M_contig7115.16965.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length231
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7115.16965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 85..127
e-value: 18.0
score: 11.2
coord: 173..215
e-value: 210.0
score: 3.0
coord: 41..83
e-value: 11.0
score: 12.9
coord: 2..39
e-value: 420.0
score: 0.7
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..215
e-value: 9.9E-28
score: 99.0
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 149..224
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 9..92
coord: 88..169
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 9..92
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 149..224
coord: 88..169
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7115contigM-pyrifera_M_contig7115:1534..5319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7115.16965.1mRNA_M-pyrifera_M_contig7115.16965.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7115 1534..5319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7115.16965.1 ID=prot_M-pyrifera_M_contig7115.16965.1|Name=mRNA_M-pyrifera_M_contig7115.16965.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp
FRQLGQGRACELVTEALRNFPQDNDAQIEACGAVANLANNSKENRTRLGN
AGACDLVTKSMATFPDNIDVQHAACVAVGNLANRDAENKKRLGSAGACNK
VCAALAGFQGDLGVQYMGCGAVGNLSNSNTQNCTRLGEAGGCLLVTGGMN
AFPEDRNLQHVGCAAVANLAIGNAPNAARLVKAGARLAVQRALQQFYRDV
EIQTRGTQALQWLSITPRMSNSESMKKLTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR040104ARMC6
IPR016024ARM-type_fold