mRNA_M-pyrifera_M_contig71119.16964.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71119.16964.1
Unique NamemRNA_M-pyrifera_M_contig71119.16964.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A2E7EHW1_9PLAN (Phage_base_V domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EHW1_9PLAN)

HSP 1 Score: 328 bits (840), Expect = 4.220e-102
Identity = 152/246 (61.79%), Postives = 189/246 (76.83%), Query Frame = 1 
Query:    4 FTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSE-DNSDGGNQYEKVYANK 738
            F ++  D   E G+ Y + SVTH +     Y MT G+G+ +  Y NEF CIP    +RP R T  P ++G Q+AVV GP+GEEI+ D+YGR+KVQF WDR GVR+EN+SCWIRC+Q  AG+NWGSMF+PR+GQEV V+FLDGN DRPL+TG++YNADQMPAY LPD+KTKSYIKTNS+ GGDG+NEI FEDLA +EQIF+HAQRN D RV+ND ++ VLND HLIVG E D    G+QY+ V+ANK
Sbjct:  313 FKVANSDVQSEIGKKYVITSVTHRSHEATSYPMTVGSGEVLPAYQNEFKCIPADVQFRPERKTEVPSVHGIQSAVVVGPEGEEIYTDSYGRIKVQFFWDRAGVRNENSSCWIRCAQFAAGKNWGSMFLPRVGQEVAVSFLDGNVDRPLVTGVLYNADQMPAYPLPDDKTKSYIKTNSTMGGDGFNEICFEDLADNEQIFVHAQRNFDLRVLNDRLQNVLNDCHLIVGQEVDGEKQGSQYQSVFANK 558
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A2E7NKH9_9PLAN (Type VI secretion system tip protein VgrG n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NKH9_9PLAN)

HSP 1 Score: 286 bits (732), Expect = 1.820e-86
Identity = 143/245 (58.37%), Postives = 167/245 (68.16%), Query Frame = 1 
Query:    4 FTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSEDNSDGGNQYEKVYANK 738
            F I+G    G+   S+ + SV H A     Y      G    DY N F+CIPD   +RP R +P P I G QTAVV GP GEEI+ D YGRVKVQFHWDR G R+E++SCWIR + S AG+ WG M IPRIGQEVVV FL+G+PDRPLI G VYNA+QMP Y LP  +T+SYIKTNSS GGDG+NEIR ED   SEQIF HA+RNMD RV ND  E V  +RHL VGS+ N   G+Q E V+ NK
Sbjct:  332 FKITGERAGGDKDGSFVITSVQHIATETLSYES---GGSVAQDYSNSFTCIPDTVVFRPARVSPEPMISGVQTAVVVGPSGEEIYTDEYGRVKVQFHWDREGQRNESSSCWIRVAHSSAGKKWGFMSIPRIGQEVVVDFLEGDPDRPLIVGSVYNAEQMPPYELPAXQTRSYIKTNSSKGGDGFNEIRIEDKXDSEQIFFHAERNMDVRVKNDSKERVGANRHLXVGSDSNGGEGDQVELVHGNK 573
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A7C6F473_9BACT (Type VI secretion system tip protein VgrG n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C6F473_9BACT)

HSP 1 Score: 271 bits (693), Expect = 3.230e-83
Identity = 131/226 (57.96%), Postives = 165/226 (73.01%), Query Frame = 1 
Query:    4 FTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIV 681
            F ++ HD   ++G +Y + SVTH A+ G  Y    G  +A   Y N F+ IP    +RPPR TP+P +YGSQTA+V GP GEEI+ D YGRVKVQFHWDR+G  +E +SCWIR SQ  AG+ WG+++IPRIGQEV+V FL+G+PDRP+ITG VYNA+QMP Y LP ++TKS IKT SS GG G+NE+RFED  GSEQIF+HAQ  MD RV  D  ET+  +RHLI+
Sbjct:  114 FELTDHDRRDQNG-TYLITSVTHSAQEGGFYSGIGGTQEAT--YDNTFTAIPYSVPFRPPRITPKPVVYGSQTAIVVGPSGEEIYTDKYGRVKVQFHWDRLGQYNEKSSCWIRVSQPWAGKGWGAIWIPRIGQEVIVDFLEGDPDRPIITGRVYNANQMPPYELPGQQTKSAIKTYSSKGGGGFNELRFEDKKGSEQIFLHAQGRMDVRVRGDSFETIGGERHLII 336
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: UPI0015D5165A (type VI secretion system tip protein VgrG n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D5165A)

HSP 1 Score: 272 bits (695), Expect = 1.820e-81
Identity = 137/244 (56.15%), Postives = 167/244 (68.44%), Query Frame = 1 
Query:    4 FTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSEDNSDGGNQYEKVYAN 735
            FT+S HDC  E G+++A+ SV H A +  P+ +    G+    Y N F+CIP    +RP R TP+P I G QTA V GP+GEEI  D YGRVKVQFHWDR G  D+ +SCWIR SQS AGRNWG M IPR+G EVVV+F+DGNPDRPLITG V NAD MP Y LPDE+TKS +KT S+ GG G+NE+RFED  G EQIFIHA+R++  R   ++ E +  DRHLIV        G Q+E V  N
Sbjct:  304 FTLSRHDCPSEQGKAWAITSVRH-AAMNTPF-LAGQTGK--ESYTNSFTCIPSSVGFRPERVTPKPGIDGIQTAFVVGPEGEEIHTDKYGRVKVQFHWDRRGQYDDKSSCWIRTSQSWAGRNWGGMTIPRVGMEVVVSFVDGNPDRPLITGFVNNADNMPPYPLPDERTKSSLKTRSTPGGKGFNELRFEDKKGKEQIFIHAERDLHSRTKREVREWIGADRHLIVK-------GAQFELVDKN 536
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: S9NTK5_9DELT (VgrG protein n=2 Tax=Cystobacter TaxID=42 RepID=S9NTK5_9DELT)

HSP 1 Score: 272 bits (695), Expect = 2.870e-81
Identity = 136/247 (55.06%), Postives = 171/247 (69.23%), Query Frame = 1 
Query:    1 IFTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSE-DNSDGGNQYEKVYANK 738
            +FT+S H     + + Y + SV H+          S  G    +Y N F+CI + T +RPPRTTPRP++ G QTAVV GP GEEI+ D YGRVKVQFHWDR G R+E +SCWIR SQ  AG +WG+MFIPRIGQEV+V F++G+PDRP+ITG VYN      Y LPDEKTKS IK+N+S  G+GYNE+RFED  G EQIF+HAQRNMD+ V ND  E +L+DRH  +GS+      G+Q E +Y +K
Sbjct:  310 LFTLSEHSRVDYNAR-YLLTSVGHYGHQSQVLDEESDGGDF--NYSNNFTCIAEQTPFRPPRTTPRPQVRGVQTAVVVGPSGEEIYTDEYGRVKVQFHWDRQGQRNERSSCWIRVSQLWAGESWGAMFIPRIGQEVIVDFIEGDPDRPIITGRVYNGANPVPYPLPDEKTKSTIKSNTSLDGNGYNELRFEDKKGQEQIFMHAQRNMDKHVKNDSFENILHDRHQTIGSQLKEGKVGDQNEMIYRDK 553
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A2V8S026_9BACT (Type VI secretion system tip protein VgrG n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8S026_9BACT)

HSP 1 Score: 271 bits (694), Expect = 4.360e-81
Identity = 134/228 (58.77%), Postives = 163/228 (71.49%), Query Frame = 1 
Query:    4 FTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGT---TYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLI 678
            FT+S H  + E  + Y V + TH A+    Y     N QA + Y N F+C+  G    ++RPPR TP+P + GSQTA V GP GEEI+ D YGRVKVQF+WDR G  +E +SCW+R +Q+ AG  WG MFIPRIG EVVV FL+G+PD+P+ITG VYN   MP YTLPDEKTKS +K+NSS GG G+NEIR ED  GSEQIFIHA+RN D RV ND+MET+ NDRHLI
Sbjct:  329 FTLSNHP-NSELNKQYTVVTATHEAEQNPSY---VSNEQATDPYTNSFTCLAHGAGQPSFRPPRKTPKPSVQGSQTAFVVGPSGEEIFTDKYGRVKVQFNWDREGNGNETSSCWVRVAQTWAGNKWGMMFIPRIGMEVVVHFLEGDPDQPIITGCVYNPQAMPPYTLPDEKTKSTMKSNSSKGGGGFNEIRIEDKKGSEQIFIHAERNQDIRVKNDVMETIKNDRHLI 552
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A7V3BML8_9BACT (Type VI secretion system tip protein VgrG n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3BML8_9BACT)

HSP 1 Score: 271 bits (692), Expect = 5.560e-81
Identity = 132/227 (58.15%), Postives = 162/227 (71.37%), Query Frame = 1 
Query:    1 IFTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIV 681
            +FT++ H  D E  ++Y +  V H              G     Y N F+CIP+GT +RPPR TP+P I G QTA+V G  GEEIW D YGRVKVQFHWDR G  DEN+SCWIR +QS AG+ WG++FIPRIGQEV+V FL+G+PD+P+ITG VYNA+ MP Y LP+E+TKS IKT SS GG G+NEIRFED  GSEQIFIHA+R+ D RV +D +E V  DRHLI+
Sbjct:  302 LFTLTHHFRD-EFNRAYLLTVVNHEGA------SNLRQGSVGASYSNSFTCIPEGTLFRPPRLTPKPMIRGPQTALVVGKQGEEIWTDKYGRVKVQFHWDREGELDENSSCWIRVAQSWAGKRWGTLFIPRIGQEVIVQFLEGDPDQPIITGCVYNAETMPPYDLPNEQTKSTIKTLSSKGGGGFNEIRFEDHKGSEQIFIHAERDQDNRVKHDSLEWVGQDRHLII 521
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A085WU16_9DELT (VgrG protein n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WU16_9DELT)

HSP 1 Score: 271 bits (693), Expect = 5.980e-81
Identity = 136/247 (55.06%), Postives = 169/247 (68.42%), Query Frame = 1 
Query:    1 IFTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSED-NSDGGNQYEKVYANK 738
            +FT++ H   G+    Y + SV H           SG G     Y N FSCI   T YRP R TP+P + G QTAVV GP  EEI  D +GRVKVQFHWDR G +DEN+SCWIR S + AG++WG+++IPRIG EV+V F++G+PDRP+ITG VYN D  P Y LPD+KTKS +K+NSS GGDGYNEIRFED   SEQ+F+HA+RNMD  V ND +E +L+DRH  +GSE  N   G+Q E VY +K
Sbjct:  313 MFTLADHT-RGDFNTRYLITSVGHQGYQPQVLDEESGGGDF--SYSNHFSCIVAKTPYRPLRVTPKPIVRGVQTAVVVGPKNEEIHTDEHGRVKVQFHWDREGKKDENSSCWIRVSHAWAGQHWGAIYIPRIGHEVIVDFIEGDPDRPIITGRVYNGDNPPPYKLPDQKTKSTLKSNSSKGGDGYNEIRFEDRKKSEQLFVHAERNMDVHVKNDSLENILHDRHQTIGSESKNGKVGDQNEMVYRDK 556
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A1L9B7H7_9DELT (Phage_base_V domain-containing protein n=1 Tax=Cystobacter ferrugineus TaxID=83449 RepID=A0A1L9B7H7_9DELT)

HSP 1 Score: 271 bits (692), Expect = 6.980e-81
Identity = 134/247 (54.25%), Postives = 171/247 (69.23%), Query Frame = 1 
Query:    1 IFTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVGSE-DNSDGGNQYEKVYANK 738
            +FT++ H    +    Y + SV H+          S  G    +Y N F+CI + T +RPPRTTPRP++ G QTAVV GP GEEI+ D +GRVKVQFHWDR G R+E +SCWIR SQ  AG +WG+MFIPRIGQEV+V F++G+PDRP+ITG VYN      Y LPDEKTKS IK+N+S  G+GYNE+RFED  G EQIF+HAQRNMD+ V ND +E +L+DRH  +GS+      G+Q E +Y +K
Sbjct:  304 LFTLAEHS-RADYNARYLLTSVGHYGHQSQVLDEESSGGDF--NYSNNFTCIAEQTPFRPPRTTPRPQVRGVQTAVVVGPSGEEIYTDEFGRVKVQFHWDRQGERNERSSCWIRVSQLWAGESWGAMFIPRIGQEVIVDFIEGDPDRPIITGRVYNGANPVPYPLPDEKTKSTIKSNTSLHGNGYNELRFEDKKGQEQIFMHAQRNMDKHVKNDSLENILHDRHQTIGSQLKEGKVGDQNEMIYRDK 547
[Close]
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Match: A0A6L4ZM60_9BACT (Phage_base_V domain-containing protein (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A6L4ZM60_9BACT)

HSP 1 Score: 266 bits (681), Expect = 9.830e-81
Identity = 124/212 (58.49%), Postives = 155/212 (73.11%), Query Frame = 1 
Query:   49 YAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFSCIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWDRVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLITGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIFIHAQRNMDQRVVNDMMETVLNDRHLIVG 684
            Y + S+ H A  G+ YR +  N     DY N F  IP  ++YRP R TP P IYGSQTA+V GP GEEI  D YGRVKVQFHWDR G  DE++SCW+R SQ+ AG+ WG++F+PRIGQEV++ FL+G+PDRP+ITG VYN + MP Y LP EKTKS  K+ SS GG+G+NE+RFED  G EQIFIH +RN D R+ ND+ ET+ ++ HLIVG
Sbjct:  324 YILTSIHHTADQGSNYRSSESNAIESFDYRNHFQAIPYPSSYRPARVTPTPVIYGSQTAIVVGPKGEEIHVDNYGRVKVQFHWDREGKYDEHSSCWVRVSQNWAGKRWGAIFLPRIGQEVIIDFLEGDPDRPIITGRVYNGNSMPPYELPTEKTKSTTKSYSSKGGEGFNELRFEDKKGQEQIFIHGERNQDIRIKNDLFETIGSNSHLIVG 535
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71119.16964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7EHW1_9PLAN4.220e-10261.79Phage_base_V domain-containing protein n=1 Tax=Pla... [more]
A0A2E7NKH9_9PLAN1.820e-8658.37Type VI secretion system tip protein VgrG n=2 Tax=... [more]
A0A7C6F473_9BACT3.230e-8357.96Type VI secretion system tip protein VgrG n=1 Tax=... [more]
UPI0015D5165A1.820e-8156.15type VI secretion system tip protein VgrG n=1 Tax=... [more]
S9NTK5_9DELT2.870e-8155.06VgrG protein n=2 Tax=Cystobacter TaxID=42 RepID=S9... [more]
A0A2V8S026_9BACT4.360e-8158.77Type VI secretion system tip protein VgrG n=1 Tax=... [more]
A0A7V3BML8_9BACT5.560e-8158.15Type VI secretion system tip protein VgrG n=1 Tax=... [more]
A0A085WU16_9DELT5.980e-8155.06VgrG protein n=1 Tax=Hyalangium minutum TaxID=3940... [more]
A0A1L9B7H7_9DELT6.980e-8154.25Phage_base_V domain-containing protein n=1 Tax=Cys... [more]
A0A6L4ZM60_9BACT9.830e-8158.49Phage_base_V domain-containing protein (Fragment) ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71119contigM-pyrifera_M_contig71119:3..1157 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score273.1
Seed ortholog evalue2e-70
Seed eggNOG ortholog1242864.D187_009086
Preferred namevgrG
KEGG koko:K11904
KEGG TC3.A.23.1
KEGG Pathwayko03070,map03070
KEGG ModuleM00334
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007015,GO:0008144,GO:0008150,GO:0008152,GO:0008154,GO:0009405,GO:0009987,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018149,GO:0018153,GO:0018193,GO:0018199,GO:0018205,GO:0018262,GO:0018995,GO:0019538,GO:0022411,GO:0030029,GO:0030036,GO:0030042,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0033643,GO:0033646,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043624,GO:0043656,GO:0043657,GO:0043933,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0046872,GO:0051261,GO:0051704,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0097435,GO:1901265,GO:1901363,GO:1901564
EggNOG free text desc.protein conserved in bacteria
EggNOG OGs1MU7Q@1224,2WKZN@28221,2YU2R@29,42Q4M@68525,COG3501@1,COG3501@2
COG Functional cat.U
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size1155
Cds size1155
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816605.571043-CDS-M-pyrifera_M_contig71119:2..11571622816605.571043-CDS-M-pyrifera_M_contig71119:2..1157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71119 3..1157 +
1692278073.2037892-CDS-M-pyrifera_M_contig71119:2..11571692278073.2037892-CDS-M-pyrifera_M_contig71119:2..1157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71119 3..1157 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71119.16964.1prot_M-pyrifera_M_contig71119.16964.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71119 3..1157 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71119.16964.1

>prot_M-pyrifera_M_contig71119.16964.1 ID=prot_M-pyrifera_M_contig71119.16964.1|Name=mRNA_M-pyrifera_M_contig71119.16964.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=385bp
IFTISGHDCDGEDGQSYAVKSVTHHAKVGAPYRMTSGNGQAVNDYFNEFS
CIPDGTTYRPPRTTPRPRIYGSQTAVVDGPDGEEIWPDAYGRVKVQFHWD
RVGVRDENTSCWIRCSQSMAGRNWGSMFIPRIGQEVVVTFLDGNPDRPLI
TGLVYNADQMPAYTLPDEKTKSYIKTNSSTGGDGYNEIRFEDLAGSEQIF
IHAQRNMDQRVVNDMMETVLNDRHLIVGSEDNSDGGNQYEKVYANKEMHI
LGDQTEQIEGNFQLTVGMGDDSDGGSFDLLIGSDKTEQIEGNNDYQCAGN
LQQSIEGDLSQSVGGDRSTKVTGSDSLEAEKNFQHKAGSNVSVDVGSSYY
LSAGSDVVIEASSSLTLKVGSNYVVIDSSGVSVVG
back to top

mRNA from alignment at M-pyrifera_M_contig71119:3..1157+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71119.16964.1 ID=mRNA_M-pyrifera_M_contig71119.16964.1|Name=mRNA_M-pyrifera_M_contig71119.16964.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1155bp|location=Sequence derived from alignment at M-pyrifera_M_contig71119:3..1157+ (Macrocystis pyrifera P11B4 male)
ATCTTCACCATTTCAGGACACGACTGCGATGGGGAAGACGGGCAATCCTA
TGCCGTAAAGTCGGTCACACATCATGCAAAAGTGGGTGCGCCGTATCGCA
TGACCAGTGGCAACGGGCAAGCGGTGAATGACTACTTCAACGAATTCAGT
TGCATCCCGGATGGGACCACCTACCGTCCACCTCGCACGACTCCCCGCCC
ACGAATTTACGGCTCGCAAACCGCTGTTGTCGACGGGCCCGATGGTGAAG
AGATTTGGCCCGACGCGTATGGCCGGGTGAAAGTGCAGTTCCATTGGGAC
CGTGTCGGGGTTCGCGATGAGAACACAAGCTGCTGGATTCGCTGTTCCCA
GTCAATGGCTGGTAGAAACTGGGGTTCGATGTTCATTCCCCGTATCGGCC
AGGAAGTAGTCGTTACTTTTTTGGATGGCAATCCCGATCGGCCATTGATC
ACGGGCCTGGTGTACAACGCCGACCAGATGCCTGCCTACACACTGCCAGA
TGAAAAGACCAAGAGCTACATCAAAACCAATAGCAGCACCGGCGGCGATG
GATACAACGAGATCCGGTTCGAAGACTTGGCAGGCAGCGAGCAAATCTTC
ATCCACGCCCAGCGAAATATGGACCAGCGAGTTGTTAACGACATGATGGA
GACCGTGCTCAACGATCGCCACTTGATTGTCGGAAGTGAAGACAACAGCG
ACGGCGGTAATCAATACGAGAAGGTCTACGCCAACAAAGAAATGCATATC
CTGGGCGATCAGACCGAGCAGATCGAGGGCAACTTTCAACTAACGGTCGG
CATGGGCGACGACAGCGATGGTGGCAGCTTCGATCTACTCATCGGCAGCG
ACAAGACAGAGCAAATCGAAGGCAATAACGACTACCAGTGTGCAGGCAAT
CTTCAGCAGAGCATCGAGGGCGATCTTTCTCAGAGCGTCGGCGGAGACCG
TTCTACCAAGGTTACGGGCAGCGATTCGCTCGAAGCGGAAAAGAACTTTC
AGCATAAAGCTGGTAGCAACGTCTCGGTCGATGTCGGAAGCAGCTACTAC
TTGTCTGCCGGAAGCGATGTTGTCATCGAAGCTTCCTCCAGCTTAACTCT
CAAAGTTGGCAGCAACTACGTGGTGATCGATAGCTCCGGGGTATCGGTGG
TCGGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig71119:3..1157+

>mRNA_M-pyrifera_M_contig71119.16964.1 ID=mRNA_M-pyrifera_M_contig71119.16964.1|Name=mRNA_M-pyrifera_M_contig71119.16964.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2310bp|location=Sequence derived from alignment at M-pyrifera_M_contig71119:3..1157+ (Macrocystis pyrifera P11B4 male)
ATCTTCACCATTTCAGGACACGACTGCGATGGGGAAGACGGGCAATCCTA
TGCCGTAAAGTCGGTCACACATCATGCAAAAGTGGGTGCGCCGTATCGCA
TGACCAGTGGCAACGGGCAAGCGGTGAATGACTACTTCAACGAATTCAGT
TGCATCCCGGATGGGACCACCTACCGTCCACCTCGCACGACTCCCCGCCC
ACGAATTTACGGCTCGCAAACCGCTGTTGTCGACGGGCCCGATGGTGAAG
AGATTTGGCCCGACGCGTATGGCCGGGTGAAAGTGCAGTTCCATTGGGAC
CGTGTCGGGGTTCGCGATGAGAACACAAGCTGCTGGATTCGCTGTTCCCA
GTCAATGGCTGGTAGAAACTGGGGTTCGATGTTCATTCCCCGTATCGGCC
AGGAAGTAGTCGTTACTTTTTTGGATGGCAATCCCGATCGGCCATTGATC
ACGGGCCTGGTGTACAACGCCGACCAGATGCCTGCCTACACACTGCCAGA
TGAAAAGACCAAGAGCTACATCAAAACCAATAGCAGCACCGGCGGCGATG
GATACAACGAGATCCGGTTCGAAGACTTGGCAGGCAGCGAGCAAATCTTC
ATCCACGCCCAGCGAAATATGGACCAGCGAGTTGTTAACGACATGATGGA
GACCGTGCTCAACGATCGCCACTTGATTGTCGGAAGTGAAGACAACAGCG
ACGGCGGTAATCAATACGAGAAGGTCTACGCCAACAAAGAAATGCATATC
CTGGGCGATCAGACCGAGCAGATCGAGGGCAACTTTCAACTAACGGTCGG
CATGGGCGACGACAGCGATGGTGGCAGCTTCGATCTACTCATCGGCAGCG
ACAAGACAGAGCAAATCGAAGGCAATAACGACTACCAGTGTGCAGGCAAT
CTTCAGCAGAGCATCGAGGGCGATCTTTCTCAGAGCGTCGGCGGAGACCG
TTCTACCAAGGTTACGGGCAGCGATTCGCTCGAAGCGGAAAAGAACTTTC
AGCATAAAGCTGGTAGCAACGTCTCGGTCGATGTCGGAAGCAGCTACTAC
TTGTCTGCCGGAAGCGATGTTGTCATCGAAGCTTCCTCCAGCTTAACTCT
CAAAGTTGGCAGCAACTACGTGGTGATCGATAGCTCCGGGGTATCGGTGG
TCGGAATCTTCACCATTTCAGGACACGACTGCGATGGGGAAGACGGGCAA
TCCTATGCCGTAAAGTCGGTCACACATCATGCAAAAGTGGGTGCGCCGTA
TCGCATGACCAGTGGCAACGGGCAAGCGGTGAATGACTACTTCAACGAAT
TCAGTTGCATCCCGGATGGGACCACCTACCGTCCACCTCGCACGACTCCC
CGCCCACGAATTTACGGCTCGCAAACCGCTGTTGTCGACGGGCCCGATGG
TGAAGAGATTTGGCCCGACGCGTATGGCCGGGTGAAAGTGCAGTTCCATT
GGGACCGTGTCGGGGTTCGCGATGAGAACACAAGCTGCTGGATTCGCTGT
TCCCAGTCAATGGCTGGTAGAAACTGGGGTTCGATGTTCATTCCCCGTAT
CGGCCAGGAAGTAGTCGTTACTTTTTTGGATGGCAATCCCGATCGGCCAT
TGATCACGGGCCTGGTGTACAACGCCGACCAGATGCCTGCCTACACACTG
CCAGATGAAAAGACCAAGAGCTACATCAAAACCAATAGCAGCACCGGCGG
CGATGGATACAACGAGATCCGGTTCGAAGACTTGGCAGGCAGCGAGCAAA
TCTTCATCCACGCCCAGCGAAATATGGACCAGCGAGTTGTTAACGACATG
ATGGAGACCGTGCTCAACGATCGCCACTTGATTGTCGGAAGTGAAGACAA
CAGCGACGGCGGTAATCAATACGAGAAGGTCTACGCCAACAAAGAAATGC
ATATCCTGGGCGATCAGACCGAGCAGATCGAGGGCAACTTTCAACTAACG
GTCGGCATGGGCGACGACAGCGATGGTGGCAGCTTCGATCTACTCATCGG
CAGCGACAAGACAGAGCAAATCGAAGGCAATAACGACTACCAGTGTGCAG
GCAATCTTCAGCAGAGCATCGAGGGCGATCTTTCTCAGAGCGTCGGCGGA
GACCGTTCTACCAAGGTTACGGGCAGCGATTCGCTCGAAGCGGAAAAGAA
CTTTCAGCATAAAGCTGGTAGCAACGTCTCGGTCGATGTCGGAAGCAGCT
ACTACTTGTCTGCCGGAAGCGATGTTGTCATCGAAGCTTCCTCCAGCTTA
ACTCTCAAAGTTGGCAGCAACTACGTGGTGATCGATAGCTCCGGGGTATC
GGTGGTCGGA
back to top