mRNA_M-pyrifera_M_contig70995.16942.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7S0P7C0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P7C0_CAFRO) HSP 1 Score: 129 bits (324), Expect = 4.590e-33 Identity = 76/145 (52.41%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 13 IGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLL 447
I +AL +FL AFKPSEPHLT YL DE GF+ + VND I YAY+ LL + PLAE GY+ I +G LR+ TR+LLL + M VM+ YAGG VAE ++ AYVFRVV ++Y G A S+Y SHVLSG+VGD++
Sbjct: 40 IAAIALFVFLLAFKPSEPHLTRYLQDEKGFSSHVVNDEIYPVWTYAYLPLLFVSAPLAEFWGYKRVIILGTGLRLGTRILLLVGTGKVAMQVMEALYAGGSVAEIVLSAYVFRVVSSQRYEEGVAASQSAYFISHVLSGVVGDVM 184
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A812LSS0_9DINO (Slc19a2 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812LSS0_9DINO) HSP 1 Score: 115 bits (287), Expect = 3.760e-27 Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 52 KPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLL 447
+PSEPHLT YL DE GF+ + VND I YAY+ LL + PLAE GY+ I +G LR+ TR+LLL + M VM+ YAGG VAE ++ AYVFRVV ++Y G A S+Y SHVLSG+VGD++
Sbjct: 13 QPSEPHLTRYLQDEKGFSSHVVNDEIYPVWTYAYLPLLFVSAPLAEFWGYKRVIILGTGLRLGTRILLLVGTGKVAMQVMEALYAGGSVAEIVLSAYVFRVVSSQRYEEGVAASQSAYFISHVLSGVVGDVM 144
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: C5KSV2_PERM5 (Uncharacterized protein n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KSV2_PERM5) HSP 1 Score: 112 bits (279), Expect = 4.630e-26 Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW F AFKPSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR+LLL + + M +M TYA G AE + Y Y+F +V E+Y+ T++ L++Y SH+LSGI+GD+++N
Sbjct: 73 FWYEATLCCTFTFFLAFKPSEPHLTTYLRETKGFTDDQINSQIYPWSTYACIPFLLIGGLLSEFIGYKFMLILGAMGRLTTRILLLFGTTVFEMQIMQCTYAFGTAAEKIFYGYLFHIVPSEKYQKLTSINLAAYVLSHMLSGIIGDVMLN 223
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6KZV1_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6KZV1_PEROL) HSP 1 Score: 111 bits (278), Expect = 1.300e-25 Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW F AF PSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL S+L M +M TYA G AE + Y Y+F VV +E Y+ T++ L+SY FSH+LSGIVGD++V+
Sbjct: 539 FWYEATICCAFTFFLAFIPSEPHLTTYLRETKGFTDDQINSQIYPWCTYACIPFLLVGGCLSEFVGYKLELILGALGRLATRFLLLFGSSLLDMQIMQCTYAFGTAAEEIFYGYLFHVVPKENYQKLTSMNLASYVFSHMLSGIVGDVMVD 689
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6PMS5_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PMS5_PEROL) HSP 1 Score: 107 bits (267), Expect = 3.180e-25 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW AF PSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL S+L M +M TY+ G AE + Y Y+F VV +E Y+ T++ L+S+ FSH+LSGIVGD++V+
Sbjct: 73 FWYEATICCTFTAFLAFIPSEPHLTTYLRETKGFTDDQINSQIYPWSTYACIPFLLVGGCLSEFVGYKLALILGALGRLATRFLLLFGSSLLDMQIMQCTYSFGTAAEEIFYGYLFHVVPKENYQKLTSMNLASHVFSHMLSGIVGDVMVD 223
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6PD44_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PD44_PEROL) HSP 1 Score: 108 bits (270), Expect = 8.420e-25 Identity = 60/151 (39.74%), Postives = 92/151 (60.93%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW F AFKPSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL + + M ++++TY+ G AE + Y Y+F VV + Y+ T++ L+++ SH+LSGIVGD+++N
Sbjct: 73 FWYEASICCAFTFFLAFKPSEPHLTTYLRETKGFTDDQINSEIYPWSTYACIPFLLIGGFLSEFVGYKLALILGAMGRLATRFLLLFGTTVLHMQILEVTYSFGTAAEKIFYGYLFHVVANKDYQKLTSMNLAAFVLSHMLSGIVGDIMLN 223
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: C5KSV3_PERM5 (Uncharacterized protein n=3 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KSV3_PERM5) HSP 1 Score: 108 bits (269), Expect = 1.160e-24 Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW AF PSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL ++L M +M TYA G AE + Y Y+F VV +E Y+ T++ L+S+ FSH++SGIVGD+++N
Sbjct: 73 FWYEAALCCSFTTFLAFIPSEPHLTTYLREVKGFTDDQINSQIYPWSTYACIPFLLVGGCLSEFVGYKLALILGAMGRLATRFLLLFGNSLLDMQIMQCTYAFGTAAEEIFYGYLFHVVPKENYQKLTSMNLASHVFSHMISGIVGDVMIN 223
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6PCZ6_PEROL (Uncharacterized protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PCZ6_PEROL) HSP 1 Score: 107 bits (267), Expect = 2.220e-24 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
FW AF PSEPHLT YL + GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL S+L M +M TY+ G AE + Y Y+F VV +E Y+ T++ L+S+ FSH+LSGIVGD++V+
Sbjct: 73 FWYEATICCTFTAFLAFIPSEPHLTTYLRETKGFTDDQINSQIYPWSTYACIPFLLVGGCLSEFVGYKLALILGALGRLATRFLLLFGSSLLDMQIMQCTYSFGTAAEEIFYGYLFHVVPKENYQKLTSMNLASHVFSHMLSGIVGDVMVD 223
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6R7U4_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6R7U4_PEROL) HSP 1 Score: 87.8 bits (216), Expect = 2.680e-18 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 97 GFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL S+L M +M TYA G AE + Y Y+F VV +E+Y+ T++ L+SY FSH+LSGIVGD++V+
Sbjct: 41 GFTDDQINSQIYPWSTYACIPFLLVGGCLSEFVGYKLELILGALGRLATRFLLLFGSSLLDMQIMQCTYAFGTAAEEIFYGYLFHVVPKEKYQKLTSMNLASYVFSHMLSGIVGDVMVD 159
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Match: A0A7J6QTA2_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QTA2_PEROL) HSP 1 Score: 87.8 bits (216), Expect = 9.390e-18 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 97 GFTENQVNDLILTAGPYAYVVLLPLIGPLAEVLGYRTGICIGMALRVITRVLLLATSNLGLMVVMDITYAGGLVAETLVYAYVFRVVHREQYRWGTAVILSSYAFSHVLSGIVGDLLVN 453
GFT++Q+N I YA + L + G L+E +GY+ + +G R+ TR LLL S+L M +M TYA G AE + Y Y+F VV +E+Y+ T++ L+SY FSH+LSGIVGD++V+
Sbjct: 41 GFTDDQINSQIYPWSTYACIPFLLVGGCLSEFVGYKLELILGALGRLATRFLLLFGSSLLDMQIMQCTYAFGTAAEEIFYGYLFHVVPKEKYQKLTSMNLASYVFSHMLSGIVGDVMVD 159 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70995.16942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70995.16942.1 >prot_M-pyrifera_M_contig70995.16942.1 ID=prot_M-pyrifera_M_contig70995.16942.1|Name=mRNA_M-pyrifera_M_contig70995.16942.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp FWNSIGPLALLMFLAAFKPSEPHLTVYLTDELGFTENQVNDLILTAGPYAback to top mRNA from alignment at M-pyrifera_M_contig70995:700..1158+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70995.16942.1 ID=mRNA_M-pyrifera_M_contig70995.16942.1|Name=mRNA_M-pyrifera_M_contig70995.16942.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig70995:700..1158+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70995:700..1158+ >mRNA_M-pyrifera_M_contig70995.16942.1 ID=mRNA_M-pyrifera_M_contig70995.16942.1|Name=mRNA_M-pyrifera_M_contig70995.16942.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig70995:700..1158+ (Macrocystis pyrifera P11B4 male)back to top |