prot_M-pyrifera_M_contig70995.16941.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70995.16941.1
Unique Nameprot_M-pyrifera_M_contig70995.16941.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
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BLAST of mRNA_M-pyrifera_M_contig70995.16941.1 vs. uniprot
Match: A0A2V5WUH1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5WUH1_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 1.420e-6
Identity = 49/186 (26.34%), Postives = 81/186 (43.55%), Query Frame = 0 
Query:   11 VLGVGSVQAQSLC--------ALPVLQKATLDQ-DCPASPVPLQVFALKNESEPMQVLLKADGTGLVDANVKIT---GSPSHVA----VSLHRVGFFHTHATTRYAGSETGWFAEPLLPLAFSED-------------FPVLGGASQALWITFVVGDEAVSGNYSGVVSVSLNGEEVGSLEYQLAI 167
            +L V S+   S C        A PV   A + + D   S     + A +NE EP Q++++ADG GL   +++++   G   H+     V+L+R  +      +  +    GW+ + L+P     D             F V   A+Q +W+   V  +A  G YSG V+V+   +E   L  +L I
Sbjct:    5 ILSVASLMVLSCCTPAQAALSAFPVDGLARVRRHDAVFSNTTASIKAARNEYEPFQIVVRADGEGLKRVSMEVSDLRGEDGHIIDRRHVTLYREQYVEVTRPSPKSKEGAGWYPDALIPFVNPPDGRPLKNARFAGAPFEVEPKANQPVWVDVFVPKDAAPGTYSGTVTVTAQHQEAVRLPVRLTI 190
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70995.16941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V5WUH1_9BACT1.420e-626.34Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..167
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70995contigM-pyrifera_M_contig70995:3..503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70995.16941.1mRNA_M-pyrifera_M_contig70995.16941.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70995 3..503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70995.16941.1 ID=prot_M-pyrifera_M_contig70995.16941.1|Name=mRNA_M-pyrifera_M_contig70995.16941.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
MWFVVLSLLGVLGVGSVQAQSLCALPVLQKATLDQDCPASPVPLQVFALK
NESEPMQVLLKADGTGLVDANVKITGSPSHVAVSLHRVGFFHTHATTRYA
GSETGWFAEPLLPLAFSEDFPVLGGASQALWITFVVGDEAVSGNYSGVVS
VSLNGEEVGSLEYQLAI
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