prot_M-pyrifera_M_contig70739.16885.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig70739.16885.1
Unique Name	prot_M-pyrifera_M_contig70739.16885.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	153

Homology

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BLAST of mRNA_M-pyrifera_M_contig70739.16885.1 vs. uniprot
Match: A0A1R2CWT2_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CWT2_9CILI)

HSP 1 Score: 62.8 bits (151), Expect = 7.520e-9
Identity = 38/129 (29.46%), Postives = 69/129 (53.49%), Query Frame = 0

Query:    6 LILISGLPGSGKTSLAWSIASLAPARWEIVVHSVDERFVELGGRKEKDEEESARLLHRARRDCLEQCANSLRTRRC-VAILDDTNHLRSMRRDAARVSTSVGASYLHVFLNTGIEVAMMRNKSREASTR 133
            +I++SG PGSGK++LA S+ +  P+             +++        + S  L H++R   L+   +SL+       I++DTNHL+S+ +   R++      +LH+ L+ G+E A+ RN++RE   R
Sbjct:    4 IIVLSGCPGSGKSTLASSLKNFLPSE-----------VIQIDTYLNSSYDFSPELYHQSRNIILKNTEDSLKLSNIPYIIIEDTNHLKSLVKPFRRLAKEYECKFLHIILDVGLETAIKRNQNREFQVR 121

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BLAST of mRNA_M-pyrifera_M_contig70739.16885.1 vs. uniprot
Match: A0A7J6LSM1_PERCH (Uncharacterized protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LSM1_PERCH)

HSP 1 Score: 58.2 bits (139), Expect = 3.500e-7
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 0

Query:    1 MNSSVLILISGLPGSGKTSLAWSIASLAPARWEIVVHSVDERFVELGGRKEKDEEESARLLHRARRDCLEQCANSLRTRRCVAI-LDDTNHLRSMRRDAARVSTSVGASYLHVFLNTGIEVAMMRNKSR 128
            M S+V++++ GLP SGK++L+  + S     + I   ++  R +   G  E++ +    L    RR  L++ A  LR    + + +DD   LRSMR+   + + SVGA    VF+N  +E  + RN  R
Sbjct:    1 MPSNVVVILCGLPASGKSTLSEKLKSQRADTYLIEYDAIGRRLLRENGWGEQEFDPG--LWREGRRVALQEMALVLRRSEGITVVMDDNQFLRSMRKSVCKAAWSVGAGVCCVFMNCPLEECLKRNAER 127

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig70739.16885.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig70739.16885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A1R2CWT2_9CILI	7.520e-9	29.46	Uncharacterized protein n=1 Tax=Stentor coeruleus ...	[more]
A0A7J6LSM1_PERCH	3.500e-7	31.01	Uncharacterized protein n=1 Tax=Perkinsus chesapea...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13671	AAA_33	coord: 6..146 e-value: 1.2E-14 score: 54.7
None	No IPR available	GENE3D	3.40.50.300		coord: 3..152 e-value: 6.8E-23 score: 83.3
None	No IPR available	PANTHER	PTHR20873	UNCHARACTERIZED	coord: 3..148
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..153
IPR017101	P-loop ATP/GTP binding protein, All4644, predicted	PIRSF	PIRSF037081	P-loop_All4644	coord: 2..153 e-value: 2.5E-13 score: 47.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig70739	contig	M-pyrifera_M_contig70739:497..955 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig70739.16885.1	mRNA_M-pyrifera_M_contig70739.16885.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig70739 497..955 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig70739.16885.1 ID=prot_M-pyrifera_M_contig70739.16885.1|Name=mRNA_M-pyrifera_M_contig70739.16885.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
MNSSVLILISGLPGSGKTSLAWSIASLAPARWEIVVHSVDERFVELGGRK
EKDEEESARLLHRARRDCLEQCANSLRTRRCVAILDDTNHLRSMRRDAAR
VSTSVGASYLHVFLNTGIEVAMMRNKSREASTRVSEESFSKIAQSLELSP
YFK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017101	P-loop_ATP/GTP-bd_All4644_prd
IPR027417	P-loop_NTPase