prot_M-pyrifera_M_contig70625.16863.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig70625.16863.1
Unique Name	prot_M-pyrifera_M_contig70625.16863.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	158

Homology

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BLAST of mRNA_M-pyrifera_M_contig70625.16863.1 vs. uniprot
Match: A0A5A8CU17_CAFRO (Lipoyl-binding domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CU17_CAFRO)

HSP 1 Score: 60.5 bits (145), Expect = 4.270e-8
Identity = 67/176 (38.07%), Postives = 89/176 (50.57%), Query Frame = 0

Query:    1 QVTVEVRATVSGAVTEVLVQEEEDVAIAAPMFKIDTEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTPPKTHATGRAHTPLIQFRHGKANREALEKRGGGEVA-------------AGRWE-------PPKSTATIDFFDLPPKYARPTLTEEEIEAINTGG 156
            +VT++VRA VSG +    V E +DV + A +  IDT+                            XXXXXXXXXXXXXX  P  +H+ G   TPLIQFRHGKANREAL  +  G+ +              G W+       P K+T T++  DLP  + RP L+  E++AI+ GG
Sbjct:   65 KVTLDVRAEVSGVLQSFSVGEGDDVDVGADLAVIDTD---------GTAAATPAKEAGEPAAAAAXXXXXXXXXXXXXXXXPAPSHSAGH-RTPLIQFRHGKANREALASKQAGKGSPAGSXXXXXXXXXGGSWDEDNYEFRPSKATQTLE--DLPSMFGRPPLSATEMDAIDMGG 228

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig70625.16863.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig70625.16863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A5A8CU17_CAFRO	4.270e-8	38.07	Lipoyl-binding domain-containing protein n=3 Tax=C...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020373	Ribosomal protein S36, mitochondrial	PFAM	PF10937	S36_mt	coord: 88..157 e-value: 9.3E-7 score: 30.4
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 2..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig70625	contig	M-pyrifera_M_contig70625:145..618 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig70625.16863.1	mRNA_M-pyrifera_M_contig70625.16863.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig70625 145..618 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig70625.16863.1 ID=prot_M-pyrifera_M_contig70625.16863.1|Name=mRNA_M-pyrifera_M_contig70625.16863.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
QVTVEVRATVSGAVTEVLVQEEEDVAIAAPMFKIDTEQEGEASSGGGGGG
AGSEEGSGDGGKVEVASSAPAPPKPTPTPQTPPKTHATGRAHTPLIQFRH
GKANREALEKRGGGEVAAGRWEPPKSTATIDFFDLPPKYARPTLTEEEIE
AINTGGV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020373	Ribosomal_S36_mt
IPR011053	Single_hybrid_motif