prot_M-pyrifera_M_contig68808.16541.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68808.16541.1
Unique Nameprot_M-pyrifera_M_contig68808.16541.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length68
Homology
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: H9W3F2_PINTA (RING-type domain-containing protein (Fragment) n=3 Tax=Pinus subgen. Pinus TaxID=139271 RepID=H9W3F2_PINTA)

HSP 1 Score: 75.9 bits (185), Expect = 5.200e-16
Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDEN 54
            C+VCLEEF++G  AR +PC   H+FH DCI  WL+L +SCPVCR Q+  DDE+
Sbjct:   66 CAVCLEEFEVGSEAREMPCK--HMFHSDCIQPWLKLHSSCPVCRYQMPVDDED 116          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A9NK49_PICSI (RING-type E3 ubiquitin transferase n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NK49_PICSI)

HSP 1 Score: 77.0 bits (188), Expect = 3.930e-15
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDEN 54
            C+VCLEEF+LG  AR++PC   H+FH DCI  WL+L +SCPVCR Q+  DDE+
Sbjct:  192 CAVCLEEFELGSEARQMPCK--HMFHSDCIQPWLKLHSSCPVCRFQMPVDDED 242          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: J3MCA0_ORYBR (RING-type domain-containing protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3MCA0_ORYBR)

HSP 1 Score: 73.9 bits (180), Expect = 4.390e-15
Identity = 32/57 (56.14%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDENPPSS 58
            C VC EEF+LG+ AR LPC   H +H DCI  WLRL NSCPVCR ++   D   P S
Sbjct:   13 CPVCKEEFELGEAARELPCK--HAYHSDCIVPWLRLHNSCPVCRQEVPVPDGEAPDS 67          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A0A6J1GWR8_CUCMO (E3 ubiquitin-protein ligase RING1-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1GWR8_CUCMO)

HSP 1 Score: 74.7 bits (182), Expect = 5.980e-15
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDEN 54
            C +CLEE + GD+A+++PCS  H FH DCI+ WL L  SCP+CR Q+  DDE+
Sbjct:  103 CVICLEEIEAGDLAKQMPCS--HKFHGDCIEKWLELHGSCPICRYQMPIDDED 153          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: UPI001C4FD030 (probable E3 ubiquitin-protein ligase RHC1A isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FD030)

HSP 1 Score: 75.9 bits (185), Expect = 1.130e-14
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 MCSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDENP 55
            +C VC EEFK+G+ AR++PC+  HV+H DCI  WLR+ NSCPVCR+++   + +P
Sbjct:  218 LCPVCKEEFKVGEEARQMPCN--HVYHSDCIVPWLRIHNSCPVCRHELHLQEASP 270          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A0A484MHI1_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MHI1_9ASTE)

HSP 1 Score: 75.9 bits (185), Expect = 1.770e-14
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDEN 54
            CSVCLEEF++G+ AR LPC   H++H +CI  WLRL NSCPVCRN +   DEN
Sbjct:  466 CSVCLEEFEVGEEARELPCK--HIYHSECIVPWLRLHNSCPVCRNDV---DEN 513          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A0A1A9V9E2_GLOAU (RING-type domain-containing protein n=1 Tax=Glossina austeni TaxID=7395 RepID=A0A1A9V9E2_GLOAU)

HSP 1 Score: 71.6 bits (174), Expect = 2.160e-14
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFD 51
            C+VCL +F+L ++ R+LPC  AH FH DC+D WL+LR +CP+CR  +F D
Sbjct:   84 CAVCLNDFQLNEVIRKLPC--AHDFHVDCVDKWLKLRRTCPMCRACVFND 131          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: UPI000C1CF87E (probable E3 ubiquitin-protein ligase RHC1A n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF87E)

HSP 1 Score: 74.7 bits (182), Expect = 2.230e-14
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDENPPSS 58
            C VC+EEFKLG  AR LPC+  H++H DCI  WLRL NSCPVCR+++    + P  S
Sbjct:  234 CPVCMEEFKLGTKARELPCN--HIYHSDCIVPWLRLHNSCPVCRHELPVPSQIPADS 288          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A0A8J5SHU1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SHU1_ZIZPA)

HSP 1 Score: 72.0 bits (175), Expect = 3.410e-14
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQI 48
            C VC E+F+LG+ AR+LPC   HV+H DCI  WLRL NSCPVCR Q+
Sbjct:   43 CPVCKEDFELGEAARQLPCK--HVYHSDCIVPWLRLHNSCPVCRYQL 87          
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Match: A0A6J1ADS6_9ROSI (RING-type E3 ubiquitin transferase n=5 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1ADS6_9ROSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.610e-14
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 CSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFFDDENPPSS 58
            C VC EEFK+G  AR LPC+  H++H DCI  WLRL NSCPVCR ++      P SS
Sbjct:  239 CPVCKEEFKVGGEARELPCN--HIYHNDCIVPWLRLHNSCPVCRQELPISSNEPSSS 293          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68808.16541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H9W3F2_PINTA5.200e-1658.49RING-type domain-containing protein (Fragment) n=3... [more]
A9NK49_PICSI3.930e-1560.38RING-type E3 ubiquitin transferase n=1 Tax=Picea s... [more]
J3MCA0_ORYBR4.390e-1556.14RING-type domain-containing protein n=2 Tax=Oryza ... [more]
A0A6J1GWR8_CUCMO5.980e-1554.72E3 ubiquitin-protein ligase RING1-like n=3 Tax=Cuc... [more]
UPI001C4FD0301.130e-1452.73probable E3 ubiquitin-protein ligase RHC1A isoform... [more]
A0A484MHI1_9ASTE1.770e-1462.26Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A1A9V9E2_GLOAU2.160e-1454.00RING-type domain-containing protein n=1 Tax=Glossi... [more]
UPI000C1CF87E2.230e-1456.14probable E3 ubiquitin-protein ligase RHC1A n=1 Tax... [more]
A0A8J5SHU1_ZIZPA3.410e-1463.83RING-type domain-containing protein n=1 Tax=Zizani... [more]
A0A6J1ADS6_9ROSI4.610e-1456.14RING-type E3 ubiquitin transferase n=5 Tax=Byttner... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 2..44
e-value: 5.6E-5
score: 32.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 1..45
e-value: 5.6E-15
score: 55.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 2..45
score: 11.147
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..61
e-value: 4.1E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 2..48
NoneNo IPR availablePANTHERPTHR15710:SF18RING/U-BOX SUPERFAMILY PROTEINcoord: 2..48
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68808contigM-pyrifera_M_contig68808:680..883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68808.16541.1mRNA_M-pyrifera_M_contig68808.16541.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68808 677..883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68808.16541.1 ID=prot_M-pyrifera_M_contig68808.16541.1|Name=mRNA_M-pyrifera_M_contig68808.16541.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp
MCSVCLEEFKLGDIARRLPCSGAHVFHKDCIDNWLRLRNSCPVCRNQIFF
DDENPPSSPTTNALPSPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD