prot_M-pyrifera_M_contig68779.16539.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68779.16539.1
Unique Nameprot_M-pyrifera_M_contig68779.16539.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length128
Homology
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A5A8C4R4_CAFRO (PCI domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4R4_CAFRO)

HSP 1 Score: 101 bits (251), Expect = 2.120e-22
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   40 PGGEFWWDVLRTRVIQHNIRVA-------------------------KVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMV 122
            P G  WW VL  RV QHN+RVA                         ++ +LVT KD+WAR+DRP G++ F+  Q PA VL+ W AD++RVL LVERT HL++KERMV
Sbjct:  512 PQGARWWGVLHRRVAQHNLRVAARTFSRIKFDRLCELTALTPAVCEEELRDLVTAKDLWARVDRPAGVVLFRRRQKPAQVLTSWGADLSRVLALVERTTHLIRKERMV 619          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A813A9Q5_9DINO (Psmd12 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A9Q5_9DINO)

HSP 1 Score: 99.4 bits (246), Expect = 7.300e-22
Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   42 GEFWWDVLRTRVIQHNIRVA-------------------------KVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMV 122
            G  WW VL  RV QHN+RVA                         ++ +LVT KD+WAR+DRP G++ F+  Q PA VL+ W AD++RVL LVERT HL++KERMV
Sbjct:  367 GARWWGVLHRRVAQHNLRVAARTFSRIKFDRLCELTALTPAVCEEELRDLVTAKDLWARVDRPAGVVLFRRRQKPAQVLTSWGADLSRVLALVERTTHLIRKERMV 472          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A3R6Z824_9STRA (RPN5_C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z824_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.270e-18
Identity = 37/84 (44.05%), Postives = 58/84 (69.05%), Query Frame = 0
Query:   42 GEFWWDVLRTRVIQHNIRVAKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGI 125
            G  W + + TR  +HNIRV++++ LV+   ++A+IDRP  II F   QSP  +L++WS D++ +L+LVE T HL+ KE M+H +
Sbjct:  390 GAQWLEDVHTRTTEHNIRVSRISALVSNGSVYAKIDRPAKIISFHKTQSPEELLTNWSTDISELLRLVETTCHLINKENMIHKV 473          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A397AHD1_9STRA (RPN5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AHD1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.680e-18
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 0
Query:   42 GEFWWDVLRTRVIQHNIRVAKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVH 123
            G  W + + TR  +HNIRV++++ LV+   ++A+IDRP  II F   QSP  +L++WS D++ +L+LVE T HL+ KE M+H
Sbjct:  359 GAQWLEDVHTRTTEHNIRVSRISALVSNGSVYAKIDRPAKIISFHKTQSPEELLTNWSTDISELLRLVETTCHLINKENMIH 440          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A6T1GVK0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1GVK0_9DINO)

HSP 1 Score: 88.2 bits (217), Expect = 7.220e-18
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
Query:   37 APGPGGEFWWDVLRTRVIQHNIRV-------------------------AKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGIR 126
            AP  G    WDVLR RV+QHNI+V                         A+++ELV +K ++A+IDRP G I+F   Q+    L+DWS  +T++L LVE T HL+QKE+MVH  R
Sbjct:  360 APHEGAAARWDVLRKRVVQHNIKVISEYYEQIHTVRLCELLGLDDKAAEAELSELVCSKFVYAKIDRPAGTIRFGQRQTYTDRLNDWSDGITKMLDLVENTCHLIQKEQMVHAAR 474          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A812RYR3_9DINO (PsmD12 protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RYR3_9DINO)

HSP 1 Score: 83.6 bits (205), Expect = 7.960e-18
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   32 AKLNSAPGPGGEFWWDVLRTRVIQHNIRVA-------------------------KVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGIR 126
            A    +P  G +  W++L+ RV+QHNI+V                          +++ELV +K ++ARIDRP G IKF   Q+    L+ WS ++T++L LVE T+HL+QKE+MVH  R
Sbjct:   31 AVFQDSPHEGAKERWELLKKRVVQHNIKVVSEYYEQIHIKRLCELVGLGDKETEEELSELVCSKFVYARIDRPAGTIKFGKKQTYIDRLNGWSDNITKMLDLVENTSHLIQKEQMVHAAR 150          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: H3H2P4_PHYRM (PCI domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3H2P4_PHYRM)

HSP 1 Score: 87.8 bits (216), Expect = 8.580e-18
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   42 GEFWWDVLRTRVIQHNIRV-------------------------AKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGI 125
            G  WW  L TRV++HNIRV                         + ++ LV+   I+A+IDRP  ++ F  P SP   LSDWSAD++++L+LVE T HLV KE M+H I
Sbjct:  328 GAEWWKTLHTRVVEHNIRVVAEHYERIRLPHLANMIGLAEDLTESSISTLVSDGSIYAKIDRPAKLVSFHRPLSPEEQLSDWSADISQLLRLVETTCHLVNKENMIHKI 436          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A1Y1YT98_9FUNG (PCI-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YT98_9FUNG)

HSP 1 Score: 86.7 bits (213), Expect = 2.230e-17
Identity = 46/105 (43.81%), Postives = 59/105 (56.19%), Query Frame = 0
Query:   46 WDVLRTRVIQHNIRVAK-------------------------VAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGI 125
            W+ L  RVI+HNIRV                           +++LV +K I+ARIDRP GII F AP+ P  VL+DWS DV  +L L+E+T HL+ KE MVH I
Sbjct:  329 WNDLHKRVIEHNIRVVAKYYTRITTKRLTQLLDLSDRETEEFLSKLVVSKTIYARIDRPAGIISFSAPKDPNQVLNDWSHDVNSLLGLIEKTTHLINKEEMVHKI 433          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: A0A812X8D2_SYMPI (Rpn502 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812X8D2_SYMPI)

HSP 1 Score: 85.5 bits (210), Expect = 3.150e-17
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   32 AKLNSAPGPGGEFWWDVLRTRVIQHNIRVA-------------------------KVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGIR 126
            A    +P  G +  W++L+ RV+QHNI+V                          +++ELV +K ++ARIDRP G IKF   Q+    L+ WS ++TR+L LVE T+HL+QKE+MVH  R
Sbjct:  214 AVFQDSPHEGAKERWELLKKRVVQHNIKVVSEYYEQIHTKRLCELVGLGDKETEEELSELVCSKFVYARIDRPAGTIKFGKKQTYTDRLNSWSDNITRMLDLVENTSHLIQKEQMVHAAR 333          
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Match: M4B3K1_HYAAE (PCI domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3K1_HYAAE)

HSP 1 Score: 85.5 bits (210), Expect = 6.320e-17
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   42 GEFWWDVLRTRVIQHNIRV-------------------------AKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSADVTRVLKLVERTAHLVQKERMVHGI 125
            G  WW  L TRV+++NIRV                         + ++ LV++  ++A+IDRP  ++ F  P SP   LS+WSAD+T++L+LVE T HLV KE M+H I
Sbjct:  359 GAEWWKTLHTRVVEYNIRVVAEHFDRIRLPHLANMIGLTEDLTESSISTLVSSGSVYAKIDRPAKLVSFHRPLSPEEQLSNWSADITQLLRLVETTCHLVNKENMIHKI 467          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68779.16539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C4R4_CAFRO2.120e-2246.30PCI domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A813A9Q5_9DINO7.300e-2246.23Psmd12 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A3R6Z824_9STRA3.270e-1844.05RPN5_C domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A397AHD1_9STRA5.680e-1845.12RPN5_C domain-containing protein n=4 Tax=Aphanomyc... [more]
A0A6T1GVK0_9DINO7.220e-1841.74Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812RYR3_9DINO7.960e-1837.50PsmD12 protein (Fragment) n=1 Tax=Symbiodinium nat... [more]
H3H2P4_PHYRM8.580e-1840.37PCI domain-containing protein n=20 Tax=Phytophthor... [more]
A0A1Y1YT98_9FUNG2.230e-1743.81PCI-domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A812X8D2_SYMPI3.150e-1738.33Rpn502 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
M4B3K1_HYAAE6.320e-1738.53PCI domain-containing protein n=1 Tax=Hyaloperonos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04089626S proteasome regulatory subunit RPN5, C-terminal domainPFAMPF18098RPN5_Ccoord: 94..124
e-value: 7.9E-12
score: 45.1
IPR03529726S Proteasome non-ATPase regulatory subunit 12PANTHERPTHR10855:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12coord: 62..123
IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4PANTHERPTHR1085526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 62..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68779contigM-pyrifera_M_contig68779:732..1190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68779.16539.1mRNA_M-pyrifera_M_contig68779.16539.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68779 732..1190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68779.16539.1 ID=prot_M-pyrifera_M_contig68779.16539.1|Name=mRNA_M-pyrifera_M_contig68779.16539.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
LPLHSTPFKPIHFIKTPPTPLPLHSTPFKIWAKLNSAPGPGGEFWWDVLR
TRVIQHNIRVAKVAELVTTKDIWARIDRPGGIIKFKAPQSPAAVLSDWSA
DVTRVLKLVERTAHLVQKERMVHGIRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040896RPN5_C
IPR035297PSMD12
IPR040134PSMD12/CSN4