prot_M-pyrifera_M_contig68773.16538.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig68773.16538.1
Unique Nameprot_M-pyrifera_M_contig68773.16538.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length312
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68773.16538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038731Glycosyltransferase RgtA/B/C/D-likePFAMPF13231PMT_2coord: 25..144
e-value: 4.7E-10
score: 39.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 188..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 299..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..298
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 270..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..269
NoneNo IPR availableTMHMMTMhelixcoord: 103..137
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 168..187
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 244..266
NoneNo IPR availableTMHMMTMhelixcoord: 279..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68773contigM-pyrifera_M_contig68773:34..969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68773.16538.1mRNA_M-pyrifera_M_contig68773.16538.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig68773 34..969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig68773.16538.1 ID=prot_M-pyrifera_M_contig68773.16538.1|Name=mRNA_M-pyrifera_M_contig68773.16538.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp
PNTRLHYLHGTDEGVRGSDAVTDLVWLRMTGVFWGVLALYFSFRALRLLF
ECERRALWFTALLAWTPQLQFISANVNMDAMLAASGAFFFWAALEWLRAP
GRAIGWAIATGAAVGVAAHVKLNGLVLGVPLVLALVLRARSRSLAVASQA
PAPRAMPLPSGSRRRESLAAALACAVSLAPYYLHGLVRTGHPLWMWAYQK
ASPLHNPPGQAEAVWDLEGLWNYHLGLFLTWFADIGWASVWFPSWIALPV
LLIFALGGAFGLVLCVRALTRGGSFSTRPGLALVLGAFLAIFVAEFYFNS
STPQPQGRHLYP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038731RgtA/B/C-like