prot_M-pyrifera_M_contig6874.16529.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6874.16529.1
Unique Nameprot_M-pyrifera_M_contig6874.16529.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length540
Homology
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BLAST of mRNA_M-pyrifera_M_contig6874.16529.1 vs. uniprot
Match: D8LBD0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD0_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 9.360e-10
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:  509 PAGWQAVPDKSSGDTYYWNKATGQTTWDFP 538
            P GWQAVPDKSSGDTYYWNKATGQTTWDFP
Sbjct:  276 PPGWQAVPDKSSGDTYYWNKATGQTTWDFP 305
[Close]
BLAST of mRNA_M-pyrifera_M_contig6874.16529.1 vs. uniprot
Match: A0A6H5KKE1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE1_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 3.980e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 0 
Query:  509 PAGWQAVPDKSSGDTYYWNKATGQTTWDFP 538
            P GWQAVPDKSSGDTYYWNKATGQTTWDFP
Sbjct:  860 PPGWQAVPDKSSGDTYYWNKATGQTTWDFP 889
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6874.16529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBD0_ECTSI9.360e-1096.67WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KKE1_9PHAE3.980e-996.67WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 417..438
NoneNo IPR availableGENE3D2.20.70.10coord: 503..539
e-value: 4.3E-10
score: 40.9
IPR001202WW domainSMARTSM00456ww_5coord: 507..539
e-value: 1.5E-4
score: 31.1
IPR001202WW domainPFAMPF00397WWcoord: 508..538
e-value: 1.3E-10
score: 41.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 512..538
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 506..539
score: 13.792
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 500..538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6874contigM-pyrifera_M_contig6874:5621..8274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6874.16529.1mRNA_M-pyrifera_M_contig6874.16529.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6874 5621..8274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6874.16529.1 ID=prot_M-pyrifera_M_contig6874.16529.1|Name=mRNA_M-pyrifera_M_contig6874.16529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=540bp
RQPPAAPPSSQPPPQAPSSRFGAPLPAPPQNGSSTTASPSFKPDGRTQAP
PSGPPAYQSRFGPPTTNQQFSPQQAAPRQQQQQQGQQQQPGQQQPGQQQQ
QQQQQQQQPGQQQQPGQQPGRTSQTNTFASRPPSGYGAPTAQPGFGAALP
SASRSAPPGFAPPSLPPQVSAGVSPSSPQFAPQQSQGYQPPQQPGQQPGQ
QPGQQPGQQPGQQPGQQPPQPPQQQPQAQQPQHTQQRDQFPPRQQPPSLQ
ARPTAGLPQQPPVQPQPGQQIMGGQGGPGQFGGPYAAPPMVGGVAPPAQY
GGRAGGATVPATAPKPAVAPPLLDPYGRPIPQAKPPQQQAPSQPQPSASL
PFNTPSGPPQQPQQQQQQKQQEQQPRQPKPQQFDAYGRPIPHEHQQPPQQ
QPPQQLPPQLDPYGRPIAQSQQQQQQQQQQQQQQQRQQPQQSQQTQQPQQ
PQQPQPQQQQQTSAAAAFGQYATQQRTQAPAPAPTPAPTPAPAPIPAPAP
AVPATPALPAGWQAVPDKSSGDTYYWNKATGQTTWDFPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf