mRNA_M-pyrifera_M_contig68698.16517.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68698.16517.1
Unique NamemRNA_M-pyrifera_M_contig68698.16517.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: UPI00064497DC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064497DC)

HSP 1 Score: 218 bits (555), Expect = 2.530e-64
Identity = 101/156 (64.74%), Postives = 121/156 (77.56%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            V KP KED+LFVPQKPYLV GT+RDQIIYPH+   M+  G+TD+DL  LL+ VDP N I+  W +DD+KDWF  FSGGQKQR+AM R+FYHRP YAILDECTSAVS EVE  IYET   LGITLFTVSHR+ L++HH  +L  +G  GGW  T+++
Sbjct:  556 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHNAEDMKRFGITDDDLQNLLSTVDPNNTIIRQWAWDDVKDWFNTFSGGQKQRVAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKTLGITLFTVSHRQQLRVHHDDVLMFDG-RGGWEWTKID 710
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: D3BCI5_POLPP (ABC transporter D family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BCI5_POLPP)

HSP 1 Score: 212 bits (540), Expect = 4.410e-62
Identity = 101/156 (64.74%), Postives = 120/156 (76.92%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            V KP KED+LFVPQKPYLV GT+RDQIIYPH+   M+  G+TD+DL  LL+ VDP N I++ W +DD+KDWF A SGGQKQRIAM R+FYHRP YAILDECTSAVS EVE  IYET   LGITLFTVSHR+ L+ +H   L  +G  GGW  T+++
Sbjct:  568 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHNAEDMKKFGITDDDLVHLLSTVDPNNTIINQWAWDDVKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKTLGITLFTVSHRQQLRAYHDDQLLFDG-RGGWEWTKID 722
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: F4Q6L7_CAVFA (ABC transporter D family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q6L7_CAVFA)

HSP 1 Score: 211 bits (536), Expect = 1.290e-61
Identity = 102/156 (65.38%), Postives = 117/156 (75.00%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            V KP KED+LFVPQKPYLV GT+RDQIIYPHS   M   G+TDEDL  LL  VDP + I+  W +DD+KDWF A SGGQKQRIAM R+FYHRP YAILDECTSAVS EVE  IYET   LGITLFTVSHR+ L+ +H   L  +G  GGW  T+++
Sbjct:  551 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHSAEDMARNGITDEDLQHLLQTVDPNSTIIRQWAWDDVKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKTLGITLFTVSHRQQLRAYHDYQLLFDG-RGGWEWTKID 705
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A151ZFR6_9MYCE (ABC transporter D family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZFR6_9MYCE)

HSP 1 Score: 210 bits (534), Expect = 3.400e-61
Identity = 101/156 (64.74%), Postives = 119/156 (76.28%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            V KP KED+LFVPQKPYLV GT+RDQIIYPH+   M+  GVTD+DL  LL+ VDP N I+  W +DD+KDWF A SGGQKQRIAM R+FYHRP YAILDECTSAVS EVE  IYET   LGITLFTVSHR+ L+ +H   L  +G  GGW  ++++
Sbjct:  572 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHNFEDMKKLGVTDDDLQHLLSTVDPNNTIIRQWNWDDVKDWFTALSGGQKQRIAMARLFYHRPRYAILDECTSAVSDEVEGKIYETCKTLGITLFTVSHRQQLRAYHDYQLLFDG-RGGWEWSKID 726
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: ABCD2_DICDI (ABC transporter D family member 2 n=2 Tax=Dictyostelium TaxID=5782 RepID=ABCD2_DICDI)

HSP 1 Score: 206 bits (524), Expect = 9.580e-60
Identity = 102/156 (65.38%), Postives = 116/156 (74.36%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            V KP KED+LFVPQKPYLV GT+RDQIIYPHS   M+  GVTD+DL  LLA VDP   I+  W +DD KDWF A SGGQKQRIAM R+FYHRP YAILDECTSAVS EVE  IYET   LGITLFTVSHR  L+ +H  +L   G  GGW  ++++
Sbjct:  575 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHSHDDMKKLGVTDDDLQHLLATVDPNLTIIRQWNWDDTKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKKLGITLFTVSHRPQLRAYHDYVLLFNG-RGGWEWSKID 729
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A6B2KZP0_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZP0_9EUKA)

HSP 1 Score: 202 bits (514), Expect = 4.380e-59
Identity = 96/156 (61.54%), Postives = 122/156 (78.21%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEVE 468
            VTKP  + +LFVPQKPYLV GT+RDQIIYPHS  +M+A+G TD+DL  LL++VDP+  IL+ W + D++DWF AFSGGQKQR+AM R+FYH P+Y ILDECTSAVS EVE+ IY T   LGITLFTVSHR +L+ HH+  L   G +GGW+  +++
Sbjct:  456 VTKPDNDCILFVPQKPYLVLGTLRDQIIYPHSEEEMKAQGATDKDLEHLLSLVDPSRTILNQWAWGDVRDWFNAFSGGQKQRVAMARLFYHTPIYGILDECTSAVSIEVEDRIYNTCKKLGITLFTVSHRPTLRKHHQFELNFNG-EGGWSWLQIQ 610
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A6B2L035_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L035_9EUKA)

HSP 1 Score: 201 bits (512), Expect = 7.620e-59
Identity = 96/151 (63.58%), Postives = 117/151 (77.48%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWN 453
            + KP K+D++F+PQK YLV GT+RDQIIYPHS A M   GVTDE+LA+LL +VDP   IL++W+ DD KDWF A SGGQKQRIAM R+FYH P +AILDECTS++SSEVE+ IYE+ + LGITLFTVSHR  L  HH  IL   G +G W+
Sbjct:  453 IIKPKKKDIVFIPQKTYLVLGTLRDQIIYPHSKADMMEAGVTDEELAQLLKIVDPKEIILNSWKLDDKKDWFHALSGGQKQRIAMARLFYHCPKFAILDECTSSISSEVEDIIYESASVLGITLFTVSHRNYLSKHHDYILTFLGKEGKWH 603
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A7S4CEP7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CEP7_9EUGL)

HSP 1 Score: 199 bits (507), Expect = 9.250e-58
Identity = 96/153 (62.75%), Postives = 121/153 (79.08%), Query Frame = 1 
Query:    7 KPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEV 465
            +P   D++FVPQKPYLV+GT+RDQ+IYPHS  +M ARGV+D DL RLLA VDP   +L+TW++DD ++W  +FSGGQKQRIAM R+FYH P +AILDECTS+VS EVE+AIYET   LGIT+FTVSHR SL+ HH+ IL  +G  G W++  V
Sbjct:  508 RPRGGDIVFVPQKPYLVQGTLRDQVIYPHSEEEMAARGVSDTDLERLLAAVDPRLTMLNTWKWDDRRNWASSFSGGQKQRIAMARLFYHCPAFAILDECTSSVSDEVEDAIYETCKILGITIFTVSHRPSLRRHHESILEFDG-RGAWDMYPV 659
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A8J4UYD2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UYD2_9MYCE)

HSP 1 Score: 199 bits (505), Expect = 4.620e-57
Identity = 99/155 (63.87%), Postives = 113/155 (72.90%), Query Frame = 1 
Query:    1 VTKPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEV 465
            V KP KED+LFVPQKPYLV GT+RDQIIYPH+   M+  GVTD+DL  LL  VDP   IL  W +D+ KDW  AFSGGQKQRIAM R+FYHRP +AILDECTSAVS EVE+ IY T   LGITLFTVSHR  L+ HH   L  +G  G W  T++
Sbjct:  567 VIKPRKEDILFVPQKPYLVLGTLRDQIIYPHNAEDMKKFGVTDDDLQHLLTTVDPNGTILRQWSWDNRKDWNSAFSGGQKQRIAMARLFYHRPQFAILDECTSAVSDEVEDKIYNTCKVLGITLFTVSHRPQLRAHHDYQLLFDG-RGKWEWTKI 720
[Close]
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Match: A0A2P6NHY0_9EUKA (ABC transporter D family protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NHY0_9EUKA)

HSP 1 Score: 185 bits (469), Expect = 1.820e-55
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 1 
Query:    7 KPMKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVDPANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSAVSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTEV 465
            KP   D LFVPQKPY V GT+RDQIIYP +  QM   G+TD DL  LL +VDP++ I + WQ D++KDW + FSGGQKQR+AM R+FYH+P +AILDECTSAVS EVE  IYET   LGITLFTVSHR  L+ +H   L  +G  GG+  T++
Sbjct:  142 KPRNNDFLFVPQKPYQVLGTLRDQIIYPDTPTQMAQAGITDADLQSLLDLVDPSHTISNQWQMDEVKDWIQTFSGGQKQRVAMARLFYHKPQFAILDECTSAVSEEVEGKIYETCKQLGITLFTVSHRRVLQRYHDYQLRFDG-SGGYEWTKI 293
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68698.16517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00064497DC2.530e-6464.74hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BCI5_POLPP4.410e-6264.74ABC transporter D family protein n=1 Tax=Polysphon... [more]
F4Q6L7_CAVFA1.290e-6165.38ABC transporter D family protein n=1 Tax=Cavenderi... [more]
A0A151ZFR6_9MYCE3.400e-6164.74ABC transporter D family protein n=1 Tax=Tieghemos... [more]
ABCD2_DICDI9.580e-6065.38ABC transporter D family member 2 n=2 Tax=Dictyost... [more]
A0A6B2KZP0_9EUKA4.380e-5961.54Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A6B2L035_9EUKA7.620e-5963.58Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A7S4CEP7_9EUGL9.250e-5862.75Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A8J4UYD2_9MYCE4.620e-5763.87Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A2P6NHY0_9EUKA1.820e-5559.48ABC transporter D family protein n=1 Tax=Planoprot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68698contigM-pyrifera_M_contig68698:3..894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue1.3e-49
Seed eggNOG ortholog44689.DDB0214891
Preferred nameABCD3
KEGG koko:K05677
KEGG TC3.A.1.203.1
KEGG Pathwayko02010,ko04146,map02010,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000038,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005324,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0005782,GO:0005829,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006996,GO:0007031,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009653,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0015399,GO:0015405,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0015910,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019395,GO:0019752,GO:0022804,GO:0022857,GO:0030258,GO:0030554,GO:0030587,GO:0031090,GO:0031224,GO:0031231,GO:0031288,GO:0031300,GO:0031301,GO:0031903,GO:0031907,GO:0031974,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033036,GO:0034440,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042579,GO:0042623,GO:0042626,GO:0042760,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043492,GO:0043621,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0046395,GO:0046942,GO:0046983,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0055114,GO:0070013,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072330,GO:0090702,GO:0097159,GO:0097367,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1901265,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1902495,GO:1904949,GO:1990351
EggNOG free text desc.ABC transporter transmembrane region 2
EggNOG OGs3X9P0@554915,COG4178@1,KOG0060@2759
COG Functional cat.P
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons2
Model size468
Cds size456
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68698.16517.1prot_M-pyrifera_M_contig68698.16517.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68698 15..894 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816578.752854-UTR-M-pyrifera_M_contig68698:2..141622816578.752854-UTR-M-pyrifera_M_contig68698:2..14Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig68698 3..14 +
1692278057.8449056-UTR-M-pyrifera_M_contig68698:2..141692278057.8449056-UTR-M-pyrifera_M_contig68698:2..14Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig68698 3..14 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816578.7658148-CDS-M-pyrifera_M_contig68698:14..3511622816578.7658148-CDS-M-pyrifera_M_contig68698:14..351Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68698 15..351 +
1692278057.8645608-CDS-M-pyrifera_M_contig68698:14..3511692278057.8645608-CDS-M-pyrifera_M_contig68698:14..351Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68698 15..351 +
1622816578.7766163-CDS-M-pyrifera_M_contig68698:775..8941622816578.7766163-CDS-M-pyrifera_M_contig68698:775..894Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68698 776..894 +
1692278057.876707-CDS-M-pyrifera_M_contig68698:775..8941692278057.876707-CDS-M-pyrifera_M_contig68698:775..894Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68698 776..894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68698.16517.1

>prot_M-pyrifera_M_contig68698.16517.1 ID=prot_M-pyrifera_M_contig68698.16517.1|Name=mRNA_M-pyrifera_M_contig68698.16517.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MKEDVLFVPQKPYLVKGTMRDQIIYPHSVAQMQARGVTDEDLARLLAVVD
PANDILSTWQFDDIKDWFRAFSGGQKQRIAMTRVFYHRPLYAILDECTSA
VSSEVENAIYETGNFLGITLFTVSHRESLKIHHKKILFIEGIDGGWNLTE
VE
back to top

mRNA from alignment at M-pyrifera_M_contig68698:3..894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68698.16517.1 ID=mRNA_M-pyrifera_M_contig68698.16517.1|Name=mRNA_M-pyrifera_M_contig68698.16517.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=892bp|location=Sequence derived from alignment at M-pyrifera_M_contig68698:3..894+ (Macrocystis pyrifera P11B4 male)
GTGACGAAGCCCATGAAGGAGGACGTCCTCTTCGTGCCGCAGAAGCCCTA
CCTCGTCAAGGGCACGATGCGCGACCAGATCATCTACCCCCACTCCGTGG
CGCAGATGCAGGCGAGAGGAGTGACTGACGAAGACCTCGCACGCCTTCTC
GCGGTGGTGGACCCCGCCAACGACATCCTCAGCACCTGGCAGTTCGACGA
CATCAAGGACTGGTTCAGAGCCTTCAGCGGCGGCCAGAAGCAGCGCATCG
CCATGACCCGCGTCTTCTACCACCGCCCCCTCTACGCCATCCTCGACGAG
TGTACCTCTGCTGTGAGCAGCGAAGTCGAGAACGCTATCTACGAGACTGG
TCAGTCAACCTTTTCCCTCCTCTTGCTCTTGCTCTCACTCGCTTCTTTCT
CTCTCTCTCTCTCTCTCTTCACTTTTGTTGCCTCATTTCTCCTCTCTCTC
TCTCGCTTGCTCTCTCTCTCTCTCTCGGGCTCTCTCTCTCTCTCTCTCTC
TCTCGGGCTCTCTCTCTCTCTCTCTCTCCTGGCTCTCTGTCTCTCTCCCG
CTCTCTCTCTCGCTCTCTCGCTCTCTCGCTCTCTTTATCTCTCTCACTCT
CTCCTCTCTCGGCGATCCCCATTGCGTCTTTTCTGTCTATTCTCCTCTGT
CCCCTCCGTTCTGTCTCTATATCGACTCTTCTTTCTTTCTCCACTCTCTC
CCTTTCTCTCCTCCCGCTGCCTGGCCTCCCACCTTCACTTTGTCAGCCCG
CAGTTCTCCTGACACGCAGGCAGGCAACTTCCTTGGCATCACTCTCTTCA
CAGTGAGCCACCGCGAGTCGCTGAAGATCCACCACAAGAAGATCCTCTTC
ATCGAGGGCATCGACGGCGGCTGGAACCTCACGGAGGTGGAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig68698:3..894+

>mRNA_M-pyrifera_M_contig68698.16517.1 ID=mRNA_M-pyrifera_M_contig68698.16517.1|Name=mRNA_M-pyrifera_M_contig68698.16517.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig68698:3..894+ (Macrocystis pyrifera P11B4 male)
ATGAAGGAGGACGTCCTCTTCGTGCCGCAGAAGCCCTACCTCGTCAAGGG
CACGATGCGCGACCAGATCATCTACCCCCACTCCGTGGCGCAGATGCAGG
CGAGAGGAGTGACTGACGAAGACCTCGCACGCCTTCTCGCGGTGGTGGAC
CCCGCCAACGACATCCTCAGCACCTGGCAGTTCGACGACATCAAGGACTG
GTTCAGAGCCTTCAGCGGCGGCCAGAAGCAGCGCATCGCCATGACCCGCG
TCTTCTACCACCGCCCCCTCTACGCCATCCTCGACGAGTGTACCTCTGCT
GTGAGCAGCGAAGTCGAGAACGCTATCTACGAGACTGATGAAGGAGGACG
TCCTCTTCGTGCCGCAGAAGCCCTACCTCGTCAAGGGCACGATGCGCGAC
CAGATCATCTACCCCCACTCCGTGGCGCAGATGCAGGCGAGAGGAGTGAC
TGACGAAGACCTCGCACGCCTTCTCGCGGTGGTGGACCCCGCCAACGACA
TCCTCAGCACCTGGCAGTTCGACGACATCAAGGACTGGTTCAGAGCCTTC
AGCGGCGGCCAGAAGCAGCGCATCGCCATGACCCGCGTCTTCTACCACCG
CCCCCTCTACGCCATCCTCGACGAGTGTACCTCTGCTGTGAGCAGCGAAG
TCGAGAACGCTATCTACGAGACTGGCAACTTCCTTGGCATCACTCTCTTC
ACAGTGAGCCACCGCGAGTCGCTGAAGATCCACCACAAGAAGATCCTCTT
CATCGAGGGCATCGACGGCGGCTGGAACCTCACGGAGGTGGAGGCAACTT
CCTTGGCATCACTCTCTTCACAGTGAGCCACCGCGAGTCGCTGAAGATCC
ACCACAAGAAGATCCTCTTCATCGAGGGCATCGACGGCGGCTGGAACCTC
ACGGAGGTGGAG
back to top