mRNA_M-pyrifera_M_contig68532.16490.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A6V3DVU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DVU9_HETAK) HSP 1 Score: 115 bits (287), Expect = 1.590e-30 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 25 PAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCGPVRK 261
P HQN++AF+HNPNS KTR+ILA+PN G+CRRC E IEW+KKYRKYKPL+QP C C +K + AYH CK C R+
Sbjct: 15 PKHQNEFAFKHNPNSKKTRKILAMPNVGLCRRCSEKIEWRKKYRKYKPLTQPAVCRFCKQKTVTSAYHSACKPCAKQRR 93
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A7S2BQ45_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQ45_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.620e-30 Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 1 EIQKMPRRPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCG 249
+ +K R+PAHQN++AF HN NS T++ILA+PN G+CRRC + IEW+KKYRKYKPL QPRKC+ C K + AYHV CK C
Sbjct: 5 QSKKKGRKPAHQNEFAFVHNANSRLTKKILAMPNEGLCRRCHDKIEWRKKYRKYKPLKQPRKCNFCHNKAVKAAYHVACKPCA 87
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: D2UXH9_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UXH9_NAEGR) HSP 1 Score: 111 bits (277), Expect = 3.730e-29 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 22 RPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCGPVRKR 264
+P HQN YAF+HN S T +IL+ PN G+C+RC +IIEWKK YRKYKPL+QPR+C+ C +K I LAYHV+C C +K+
Sbjct: 10 KPRHQNDYAFKHNKASKLTAKILSTPNVGLCKRCHDIIEWKKAYRKYKPLTQPRRCNVCQQKTITLAYHVICDACAKKQKK 90
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A6A5BUN5_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BUN5_NAEFO) HSP 1 Score: 110 bits (274), Expect = 1.710e-28 Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 22 RPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCGPVRKR 264
+P +QN+YAF+HN S T +IL+ PN G+CRRC +IIEWKK YRKYKPL+QPR+C+ C +K + LAYHV+C +C ++
Sbjct: 10 KPRYQNEYAFKHNKASKLTSKILSTPNVGLCRRCHDIIEWKKAYRKYKPLTQPRRCNICQQKTVTLAYHVICNKCAKENRK 90
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A7S2FXE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXE3_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.760e-28 Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 25 PAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCG 249
P+HQN +AF+HNPNS T++ILA+PN G+CRRC E IEW+KKYRKYKPL P C+ C +K + AYHV C+ C
Sbjct: 25 PSHQNGFAFQHNPNSKLTKKILAMPNEGLCRRCTEKIEWRKKYRKYKPLRVPGSCNYCRKKAVTAAYHVACRPCA 99
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: K0SDJ3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDJ3_THAOC) HSP 1 Score: 112 bits (280), Expect = 1.930e-28 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 19 RRPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCGPVRK 261
R P HQN +AFRHNP S KT +ILA PN GVC RC + IEW+KKYRKYKP +QP KC+ CG+K I+ AYH +C +C K
Sbjct: 14 RAPKHQNSFAFRHNPKSKKTDKILASPNVGVCGRCHDKIEWRKKYRKYKPRTQPGKCNVCGQKNIMAAYHTICTKCAGSEK 94
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A6T6VFD4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A6T6VFD4_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.230e-27 Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 25 PAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCGPVR 258
P H+N +AF+HN NS KT++IL I + G+C RC EIIEWKKKYRKYKPL P+KC+ C + I AYH LC C R
Sbjct: 13 PKHKNSFAFKHNKNSKKTKKILGIDHHGLCSRCSEIIEWKKKYRKYKPLKAPKKCNGCDRRSIAKAYHTLCDDCARSR 90
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A0H5R2V5_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R2V5_9EUKA) HSP 1 Score: 107 bits (267), Expect = 5.750e-27 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 25 PAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCG 249
PAH NK+AF+HNP+S T+ I AIP VC RC +I+EW+K +RKYKPL +PRKCD C + I+ +YHV+C+QC
Sbjct: 21 PAHLNKFAFKHNPHSAVTKAIAAIPQRRVCSRCYDILEWRKSFRKYKPLKKPRKCDQCNNQTIITSYHVICEQCS 95
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: A0A7S4VSA8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VSA8_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.850e-27 Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 25 PAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQC 246
PAHQNKYAF+HNP S T +IL+ PN GVC++C + IEW+KKYRKYKPL QP C+ C ++ + AYH +C C
Sbjct: 17 PAHQNKYAFKHNPKSKLTEKILSSPNEGVCKKCHDKIEWRKKYRKYKPLKQPSTCNVCRKRNVKAAYHTICNDC 90
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Match: D8M6Q4_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6Q4_BLAHO) HSP 1 Score: 103 bits (258), Expect = 9.650e-27 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 19 RRPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYKPLSQPRKCDSCGEKKIVLAYHVLCKQCG 249
R PAHQNK++FRHN NS KT +I A+P VC RC++ IEWKKKYRKYKPL+ P KC CG + + AYH +C +C
Sbjct: 11 RTPAHQNKFSFRHNKNSKKTEKIAAMPIYLVCERCRKKIEWKKKYRKYKPLTAPGKCVKCGNRNVKAAYHQICDECA 87 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68532.16490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68532.16490.1 >prot_M-pyrifera_M_contig68532.16490.1 ID=prot_M-pyrifera_M_contig68532.16490.1|Name=mRNA_M-pyrifera_M_contig68532.16490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp MPRRPAHQNKYAFRHNPNSVKTRRILAIPNTGVCRRCKEIIEWKKKYRKYback to top mRNA from alignment at M-pyrifera_M_contig68532:710..973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68532.16490.1 ID=mRNA_M-pyrifera_M_contig68532.16490.1|Name=mRNA_M-pyrifera_M_contig68532.16490.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig68532:710..973+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68532:710..973+ >mRNA_M-pyrifera_M_contig68532.16490.1 ID=mRNA_M-pyrifera_M_contig68532.16490.1|Name=mRNA_M-pyrifera_M_contig68532.16490.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig68532:710..973+ (Macrocystis pyrifera P11B4 male)back to top |