mRNA_M-pyrifera_M_contig68496.16479.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A838QPX0_9BACT (FG-GAP repeat protein (Fragment) n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A838QPX0_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 1.020e-20 Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 7 EIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSINAQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++AVGA G S+ G +++L + +G V I S G P + + D FGS ++ LGD+DGDGI +DL +GA D GA+HVL + +GTV KIAS A GGP QFGT V GD+DG+G+ ++L VG+ DD G +RG+V +
Sbjct: 412 DLAVGAYGDDTGGSDRGAIHVLFMNSNGTVKSQQKIASGIGGG-PSLANSDKFGSSVTSLGDMDGDGI-ADLAVGAVNDDTGGFNRGAVHVLFMNSNGTVKSSQKIASGAGGGPTLVNGDQFGTSVAATGDLDGDGV-TDLAVGSYYDDTGGTSRGAVHV 568
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A847GYA0_9BACT (Cadherin domain-containing protein (Fragment) n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GYA0_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 1.030e-17 Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 73 SGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPAR-SINAQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
SG V I DGN + + D+FG G++ LGD DGDG+ D+ IGA D ++ GA+ ++ + DGTV H KI+ T + +N +FGT V IGD+DGNG+ ++L VGA +D + G NRG+V++
Sbjct: 529 SGLVKSQQKISDTDGNFTGELDNGDYFGVGVTKLGDQDGDGVP-DVAIGAYADDDGGADQGAVWIVFLNSDGTVKSHQKISETQGAFTGQLDVNNRFGTSVASIGDLDGNGV-TDLVVGASNDGDGGANRGAVWV 661
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: B5JK83_9BACT (FG-GAP repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JK83_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 4.640e-17 Identity = 60/160 (37.50%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 7 EIAVGA---PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSINA-QFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++AVG G N G V+IL + G V+ I G + + FGS + +GD++GDGI DL +G D+ ++ GA+ +L + DGTVG H KI+ T G A +N QFG+ V IGD+DG+G+ +++ VG+ DD+ G N+G+V+I
Sbjct: 909 DLAVGTFDDDGGFNTGAVWILFMNEDGTVAAEQKISDTQGEFTGDLNTNALFGSALCGIGDLNGDGIP-DLAVGNYGDNDGGNDRGAVWILFLNSDGTVGNHQKISQTRGGFTAPLLNDDQFGSAVANIGDLDGDGV-TDIAVGSWHDDDGGSNKGAVWI 1066
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A075HJG0_9ARCH (FG-GAP repeat domain protein n=3 Tax=environmental samples TaxID=651140 RepID=A0A075HJG0_9ARCH) HSP 1 Score: 85.5 bits (210), Expect = 2.080e-16 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 1
Query: 7 EIAVGAPGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHW-KIASTASGGPARSINAQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++AVGA G VYI+ + G V I N P + S D FG GI+ +GD+DG+G+ DL +GA D ++ GALH++ + DGT+ K +I + + GP + FG+ V IGD+DGNG+ ++L VGA D+ EG +RG++ I
Sbjct: 225 DLAVGA--IDGKGAVYIMFMNTDGSVDSTVEINDSTTNG-PDLASGDQFGLGIANIGDLDGNGVN-DLAVGAIYDDGTGTDRGALHIIFLDSDGTLTKQSAEINDSTTNGPDLEDSDFFGSAVEKIGDLDGNGV-NDLAVGAFDDNGEGTDRGALHI 376
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: UPI001AAF524C (T9SS type B sorting domain-containing protein n=1 Tax=Gelidibacter pelagius TaxID=2819985 RepID=UPI001AAF524C) HSP 1 Score: 85.1 bits (209), Expect = 2.860e-16 Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 7 EIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASG-GPARSINAQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++AVGA N G +YIL + G V I G +++ D FG +S+LGD++GDG + ++ +GA D +GA+++L + DGTV H KI+S G + FG+ V +GD+DG+GI ++ VGA DD+ G RG+++I
Sbjct: 68 DVAVGAMQDDENGFNKGAIYILFLNPDGSVKRSQKIAQGIGGFNEILEDSDIFGVSVSLLGDMNGDG-KIEIAVGAEYDGDGGFHHGAVYILSLNTDGTVFSHQKISSLHGGFNGVLGVWDVFGSAVESLGDLDGDGI-QDIAVGARRDDDGGTERGAIWI 226
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A2A5H6E8_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A5H6E8_9FLAO) HSP 1 Score: 82.8 bits (203), Expect = 1.860e-15 Identity = 59/169 (34.91%), Postives = 99/169 (58.58%), Query Frame = 1
Query: 4 VEIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKD-------SAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPAR-SINAQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++IAVGA GA++ G VY+L + +G + ++ I G + S FGS +S LGD+DGDGI D+ +GA +D +A++ GA+ +L + +GTV H K+AS++ G +IN +FG + IGD++ +G+ ++ VGA D + G +RG+++I
Sbjct: 144 IDIAVGAGLDDDGATDKGAVYVLFLDTNGTLKNYQKISDTAGGFTGSMLSNSLFGSAVSGLGDMDGDGIN-DIAVGAMRDHNGEGVLNAIRK--GAVWILFLDTNGTVQSHTKVASSSGGFTGTLTINNRFGAALATIGDLNEDGVV-DIAVGANRDADGGLSRGAIWI 308
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A238UAI1_9FLAO (Uncharacterized protein n=2 Tax=Tenacibaculum jejuense TaxID=584609 RepID=A0A238UAI1_9FLAO) HSP 1 Score: 82.0 bits (201), Expect = 3.420e-15 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 7 EIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSIN--AQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
+IAVGA G S+ G V+IL + +V + I + G V+ + D FG +S LGD++ DG+ +L +GA D +GA+ +L + DGTV H KI+ T G IN A FGT + IGD+DG+GI +L VG+ D + G RG+V+I
Sbjct: 71 DIAVGAFGDDDGGSSRGAVWILFLDTDNQVISHTKISNTSGGFTGVLDNDDRFGGAVSYLGDINNDGLI-ELAVGADYDGDGGFWHGAVWILSLNNDGTVNSHRKISDT-QGNFLGFINGDAIFGTDIENIGDLDGDGI-QDLAVGSRRDGDGGSRRGAVWI 229
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A7G8W778_9FLAO (T9SS type B sorting domain-containing protein n=2 Tax=Winogradskyella TaxID=286104 RepID=A0A7G8W778_9FLAO) HSP 1 Score: 82.0 bits (201), Expect = 3.450e-15 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 1
Query: 7 EIAVGAPGASNGGI----VYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSINAQ--FGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
E+AVGA +GG V+ILS+ +G V+ S I G I FG+ I +GD++ DG++ DL +G+ +D+ GAL +L + D TVG KI+ST SGG S N + FG V IGD++G+G+ +L VG+ D+++ N GSV+I
Sbjct: 133 ELAVGADYDEDGGYWHGAVWILSLNNNGTVNSHSKISDTQGGFDGFINGDAIFGTDIVNIGDLNNDGVQ-DLAVGSRRDNDGGGNAGALWILFMNTDFTVGSWQKISST-SGGLGISFNFEDYFGGAVANIGDLNGDGVV-DLAVGSYRDNDQNTNSGSVYI 291
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: A0A345H3A9_9FLAO (FG-GAP repeat protein n=1 Tax=Kordia sp. SMS9 TaxID=2282170 RepID=A0A345H3A9_9FLAO) HSP 1 Score: 81.3 bits (199), Expect = 6.400e-15 Identity = 61/162 (37.65%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 7 EIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSIN--AQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
+ AVGA G +N G V+IL + + +V + I S GN + D FG ++ LGD++ DG+ +L +GA+ D +GA+ +L + DGTV H KI+ T GG IN A FGT + IGD++G+GI +L VG+ D + G RG+V+I
Sbjct: 66 DFAVGAFNDDDGGTNSGAVWILFMDANDQVISHTKISSTSGNFTGDLDPNDGFGVSVAYLGDLNSDGLI-ELAVGATYDGDGGFWHGAVWILSLNSDGTVNSHSKISDT-QGGFTGFINGDAVFGTDIENIGDLNGDGI-EDLAVGSRRDADGGSRRGAVWI 224
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Match: UPI0006297446 (T9SS type B sorting domain-containing protein n=1 Tax=Kordia zhangzhouensis TaxID=1620405 RepID=UPI0006297446) HSP 1 Score: 80.9 bits (198), Expect = 8.780e-15 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 7 EIAVGA----PGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFFGSGISMLGDVDGDGIRSDLVIGASKDSAVKSEYGALHVLKVAKDGTVGKHWKIASTASGGPARSIN--AQFGTCVNWIGDIDGNGIASELGVGALSDDEEGKNRGSVFI 474
++AVGA G ++ G V+IL + S +V + I + GN + D FG ++ LGD++ DG+ +L +GA D +GA+ +L + DGTV H KI+ T GG IN A FGT + IGD++G+GI +L VG+ D + G RG+V+I
Sbjct: 64 DVAVGAYTDDDGGTDKGAVWILFLDASNQVISHTKISNTSGNFTGSLDPNDRFGGAVAYLGDLNNDGLI-ELAVGADYDGDGGFWHGAVWILSLNSDGTVNSHTKISDT-QGGFTGFINGDAIFGTDIENIGDLNGDGI-QDLAVGSRRDADGGSRRGAVWI 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68496.16479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68496.16479.1 >prot_M-pyrifera_M_contig68496.16479.1 ID=prot_M-pyrifera_M_contig68496.16479.1|Name=mRNA_M-pyrifera_M_contig68496.16479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp SVEIAVGAPGASNGGIVYILSVGGSGRVSHFSLIPSVDGNNIPVIQSQDFback to top mRNA from alignment at M-pyrifera_M_contig68496:318..791- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68496.16479.1 ID=mRNA_M-pyrifera_M_contig68496.16479.1|Name=mRNA_M-pyrifera_M_contig68496.16479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig68496:318..791- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68496:318..791- >mRNA_M-pyrifera_M_contig68496.16479.1 ID=mRNA_M-pyrifera_M_contig68496.16479.1|Name=mRNA_M-pyrifera_M_contig68496.16479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig68496:318..791- (Macrocystis pyrifera P11B4 male)back to top |