prot_M-pyrifera_M_contig6846.16473.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig6846.16473.1
Unique Name	prot_M-pyrifera_M_contig6846.16473.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	214

Homology

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 6.080e-92
Identity = 136/195 (69.74%), Postives = 159/195 (81.54%), Query Frame = 0

Query:   27 AIRCASASSSRTA--------YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            A+R A+ +SS +A        YV TLPGAPF DGKIFDPLELSD A P +IK WREAEIKHGRV+MLA +GVIVAE++HPLFMG   IGPAV+HFQ+I+AQ+PEFW FSL GMA +EY +IT AYAEP P+TGEG LR++Y PG+LGFDPL LKPK+   L+ M+TKELNNGRLAMIGIAGMLVQELVNP +IL 
Sbjct:   27 AVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.680e-91
Identity = 135/195 (69.23%), Postives = 158/195 (81.03%), Query Frame = 0

Query:   27 AIRCASASSSRTA--------YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            A+R A+ +SS +A        YV TLPGAPF DGKIFDPL LSD A PADIKKWREAEIKHGRV+MLA LGV+VAE++HPLFMG   IGPAV+HFQ+I+AQYPEFWVFSL GMA +EY +I TA+  P  +TGEG L+EDY+PG+LGFDPL LKP++   L  M+TKELNNGRLAMIGIAGMLVQEL+NP +IL 
Sbjct:   26 AVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.410e-86
Identity = 130/194 (67.01%), Postives = 152/194 (78.35%), Query Frame = 0

Query:   27 AIRCASASSSRTA--------YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNIL 212
            A+R A+ +S+ +A        YV TLPGAPF DGKIFDPL LSD AAP DIKKWREAEIKHGRV+MLA LG++VAE++HPLFMG   IGPA+ HFQ+I+AQ+PEFW FSL GMA +EY +I TA+  P  +TGEG L+EDYIPG+LGFDPL LKP     L  M+TKELNNGRLAMIGIAGML QELVN  +IL
Sbjct:   26 AVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.550e-79
Identity = 121/175 (69.14%), Postives = 139/175 (79.43%), Query Frame = 0

Query:   39 AYVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            A+ +  P A  P  +IFDPL LSD AAP DIKKWREAEIKHGRV+MLA LGVIVAE++HP FMG   IGPAV+HFQ+I+AQ+PEFW FSL GMA VEY +I TA+  P  +TGEG L+EDYIPG+LGFDPL LKP +   L  M+TKELNNGRLAMIGIAGML QELVNP +IL 
Sbjct:   24 AFDHRCPNALVP--QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.560e-79
Identity = 121/195 (62.05%), Postives = 151/195 (77.44%), Query Frame = 0

Query:   27 AIRCASASSSRTA--------YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            A+R A+ +SS +A        Y+ TLPGA   +GKIFD LEL+D A P +IK WREAEIKHGRV+MLA +GV+VAE++HP FMG   IGPAV+HFQ+ITA++P+FW +SL GMA +EY +I  AYAEP P+TGEG LR++Y PG+LGFDP K+KPK+   L+ M+ KELNNGRLAMIGI GMLVQELVN  +IL 
Sbjct:   27 AVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 2.390e-76
Identity = 112/181 (61.88%), Postives = 143/181 (79.01%), Query Frame = 0

Query:   31 ASASSSRTAYVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNI 211
            A+  S+ + YV+TLPGAPF DGK++DP+ LS  A P DIKKWREAEIKHGRV+MLA +GV+VAE FHPLF+G   IGPA+ HF++ITA++P+FW  +L  +A +EYR I   +AE DP+TGEG +R DY+PG+LGFDPL L P++   L  M+TKELN+GRLAMIGI GM+VQELV P+ I
Sbjct:   89 AARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPI 269

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 3.770e-76
Identity = 116/174 (66.67%), Postives = 137/174 (78.74%), Query Frame = 0

Query:   40 YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            YV T    P    KIFDPL L+D A   DIK WREAEIKHGRV+MLA LGV+VAE++HP FMG   IGPAV+HFQ+I+A++PEFW FSL  +AL+EY +IT AYAEP  +TGEG LR++Y PG+LGFDPL LKP +   L++M+TKELNNGRLAMIGIAG LVQELVNP NIL 
Sbjct:    6 YVGTRSLLP----KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNILD 175

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.140e-75
Identity = 118/174 (67.82%), Postives = 138/174 (79.31%), Query Frame = 0

Query:   40 YVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            + +  P A  P  +IFDPL LSD AAP DIKKWREAEIKHGRV+MLA LGVIVAE++HP FMG   IGPAV+HFQ+I+AQ+PEFW FSL GMA +EY +I TA+  P  +TGEG L+EDY+PG+LGFDPL LKP +   L  M+TKELNNGRLAMIGIAGML QELVNP +IL 
Sbjct:  221 FDHRCPNALVP--QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 4.460e-66
Identity = 110/179 (61.45%), Postives = 123/179 (68.72%), Query Frame = 0

Query:   35 SSRTAYVNTLPGAPFPDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            S+ + YV TLPGAPF DGKIFDPL LSD AAP DIKKWREAEIKHGRV+MLA LGVIVAE                            FW FSL GMA +EY +I TA+  P  +TGEG L+EDY+PG+LGFDPL LKP +   L  M+TKELNNGRLAMIGIAGML QELVNP +IL 
Sbjct:   42 SAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.870e-58
Identity = 99/189 (52.38%), Postives = 131/189 (69.31%), Query Frame = 0

Query:   31 ASASSSRTA---YVNTLPGAPF---PDGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLFMGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPITGEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGMLVQELVNPVNILS 213
            AS++   TA   Y  +LPGAPF    +GK FDP  L+    P  IKKWREAE+KHGRVSMLA +G++V+E FHPLFMG A IGPAV H QQI   YP FWV SL  +A +E ++I  A+    P+TG G+L+ +Y PG+LGFDPL L PK+ +  + ++++EL+ GR AMIG+ GM+VQE+V+   IL 
Sbjct:   37 ASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGILE 225

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig6846.16473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7S1_ECTSI	6.080e-92	69.74	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q6_ECTSI	1.680e-91	69.23	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	1.410e-86	67.01	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	1.550e-79	69.14	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	4.560e-79	62.05	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G5B4_ECTSI	2.390e-76	61.88	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	3.770e-76	66.67	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	1.140e-75	67.82	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5K8D0_9PHAE	4.460e-66	61.45	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7FQG7_ECTSI	2.870e-58	52.38	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 35..213 e-value: 4.6E-36 score: 126.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 43..204 e-value: 1.6E-36 score: 126.3
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 39..207
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 36..212
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 39..207

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig6846	contig	M-pyrifera_M_contig6846:5856..13133 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig6846.16473.1	mRNA_M-pyrifera_M_contig6846.16473.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig6846 5856..13133 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig6846.16473.1 ID=prot_M-pyrifera_M_contig6846.16473.1|Name=mRNA_M-pyrifera_M_contig6846.16473.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
YRHPDVPRRCRYPHRILDCLRRADGRAIRCASASSSRTAYVNTLPGAPFP
DGKIFDPLELSDVAAPADIKKWREAEIKHGRVSMLACLGVIVAEKFHPLF
MGTADIGPAVNHFQQITAQYPEFWVFSLFGMALVEYRSITTAYAEPDPIT
GEGDLREDYIPGNLGFDPLKLKPKNPKVLKSMETKELNNGRLAMIGIAGM
LVQELVNPVNILS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln