mRNA_M-pyrifera_M_contig68426.16466.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68426.16466.1
Unique NamemRNA_M-pyrifera_M_contig68426.16466.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A2D9C4J9_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9C4J9_9BACT)

HSP 1 Score: 573 bits (1478), Expect = 3.120e-200
Identity = 284/410 (69.27%), Postives = 342/410 (83.41%), Query Frame = 1
Query:    1 ESERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            +++ F+ P +  LH+P LIPDL RAADRI++A  N E+I IFGDYDVDGVTASAIL+H +RAI P+  +ISYIPHR++EGYGLNCDAI+ L   G S++VSVDCGITA EPA  A+++G+DLIITDHHNPPA++D++PDAFAVVHPRRPDS YPFGELCGAGVAYKLAW L T H  SERVSP +R VL++ML FAALGSIAD+VPL+DENRVIVKHGLR+I H  NEGL ALI A+GLDS  +DTE VGFRLAPRLNA+GRLGHA+EALEL+TNA   EA +LA+RL+++N++R++    I AQA EMA ++GM    QRAIVLA +DWHPG+VGIVCSRLVER++RP IL+ RDGD+CKGSGRSID FNLHAGL+AC+E L  +GGHDMAAGM C  +QFE F  AFI
Sbjct:   31 QADSFMNPSLKALHEPKLIPDLQRAADRIIEAVKNRETIAIFGDYDVDGVTASAILIHTLRAIDPQLNIISYIPHRVDEGYGLNCDAIRELHSQGVSLVVSVDCGITAHEPAKTAREIGLDLIITDHHNPPASIDDLPDAFAVVHPRRPDSDYPFGELCGAGVAYKLAWHLCTLHCGSERVSPPLRGVLVEMLGFAALGSIADVVPLLDENRVIVKHGLRQIPHARNEGLRALIAASGLDSNKIDTEDVGFRLAPRLNAIGRLGHAAEALELMTNATGSEAARLAQRLSKINDERKSIGEAIYAQAEEMAISAGMVGPEQRAIVLAHDDWHPGVVGIVCSRLVERYARPVILMQRDGDVCKGSGRSIDGFNLHAGLDACTEHLIGYGGHDMAAGMRCQSEQFEHFANAFI 440          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A3M2CH37_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CH37_9BACT)

HSP 1 Score: 554 bits (1428), Expect = 4.630e-192
Identity = 275/406 (67.73%), Postives = 330/406 (81.28%), Query Frame = 1
Query:   13 FLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            FL P +  +HDP L+PD+D+AA RIL A T  E +VI+GDYDVDGVTASAIL+H+IRAI P+A + +YIPHR++EGYG+N DAI  LA DGA VI+SVDCGITA+EPAL+A +LGVDLIITDHHNPPA + ++P A+AVVHPRRPDS YPFG+LCGAGVAYKLAWRLAT HA  ++ SPA R +L+++L FAALG+IADIVPL DENRVI +HGLR++    NEGLHALIHA+GLDS  VD EAVGFRLAPRLNAVGRLGHA EALELLT A  E AK+LAE L+ +NE+RR  E  IV +A  MAE +GMT    RAIVLA E WHPG+VGIVCSRLVE++ RPT+L+ RDGD+CKGSGRSI+ FNLH  LE C+  L  FGGHDMAAGM+C  D+ + F ++F+
Sbjct:   61 FLDPSLQTMHDPGLLPDIDKAARRILDALTGRERVVIYGDYDVDGVTASAILIHMIRAIDPDADVRAYIPHRIDEGYGINADAIAQLASDGARVILSVDCGITAVEPALVAARLGVDLIITDHHNPPAVLADLPAAYAVVHPRRPDSRYPFGDLCGAGVAYKLAWRLATMHAGGDKASPACRSLLIELLGFAALGTIADIVPLRDENRVITRHGLRQLARPRNEGLHALIHASGLDSDKVDAEAVGFRLAPRLNAVGRLGHAREALELLTEASGERAKELAEMLSSLNEERRRVERSIVDEACRMAEEAGMTGPGVRAIVLAHEGWHPGVVGIVCSRLVEKYGRPTVLMQRDGDMCKGSGRSIEGFNLHGALEHCAAHLDRFGGHDMAAGMACRTDRLDGFTRSFL 466          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: UPI001AC8BDD9 (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AC8BDD9)

HSP 1 Score: 488 bits (1255), Expect = 5.580e-166
Identity = 247/408 (60.54%), Postives = 313/408 (76.72%), Query Frame = 1
Query:    4 SERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAF 1227
            S RFL+P +  LHDPS +PDLDRAA+RIL AA   E I I+GDYDVDGV+A+AIL H +  I P A + +Y+PHRLEEGYGLN +AI+ LA  GA VIVSVDCG+TA+EPA +A   G+DLIITDHHNPPA++D++P A+AVVHPRRPDS YPFG+LCGAGVAYKLAWRLAT    S+RV+  +R +L+++LA A+LG IAD+VPL DENRVI + GL RI H + EGL AL+ A+GL   ++  + VGFRL PRLNA GR+GHA EA+ELLT+A+   A ++AE+LT+ N++RRA E  I   A E+AE+SGMT   +RAI+L+   WH G+VGIVCSRLVERF RPTIL+C    +C GSGRS++ F+LHA L  CSE L  FGGHDMAAG++   ++  AF ++F
Sbjct:   51 SARFLEPSLRHLHDPSGMPDLDRAAERILAAARAGEPIFIYGDYDVDGVSATAILYHTLLEIAPSANIGTYVPHRLEEGYGLNSEAIRELAGRGAKVIVSVDCGVTALEPARIALAAGIDLIITDHHNPPASVDDLPRAYAVVHPRRPDSTYPFGDLCGAGVAYKLAWRLATLACGSQRVTDRLRALLIELLALASLGVIADVVPLADENRVIARFGLGRIKHSSLEGLRALVEASGLAGENIREDDVGFRLGPRLNACGRMGHAREAVELLTSARGPRAIEIAEKLTRFNDERRATEQAIFKHAAELAESSGMTRPDRRAIILSDPSWHAGVVGIVCSRLVERFHRPTILMCEGEGVCHGSGRSVEGFSLHAALMECSEHLAQFGGHDMAAGVTVKSERVPAFVESF 458          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A7V1Q1J8_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V1Q1J8_9BACT)

HSP 1 Score: 482 bits (1241), Expect = 1.440e-164
Identity = 251/414 (60.63%), Postives = 310/414 (74.88%), Query Frame = 1
Query:    4 SERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPE---AKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKH--AQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            +E    P M  LHDP+L+PD+D+A  R+L A  + E+I I+GDYDVDG+TASA+L H I AI  E    +LI+YIPHRL+EGYGLN +AI+SLA  GA  I+SVDCGITA E A +AK LGVDLIITDHHNPP+    +PDA A++HPR P S YPFGELCGAGVAYKLAWRL   H      +V+P  R++LL++LAFA+LG++AD+VPLIDENR+I + GLRRI   +  GL  L+ A+GLD   V+ E VGFRL PRLNA GR+GHA+EA+EL T A    A+++A+ L +MN +RR  E  I+ QAIEMAEA GMT   +RAIVLA  DWHPG+VGIVCSRLVERF+RP+ILLC+    CKGSGRSI  FNLHAGLEAC +FL +FGGHDMAAG+      F+ F ++FI
Sbjct:   15 AETLSHPSMQQLHDPALLPDIDKACRRLLAAIADGETIAIYGDYDVDGITASAVLYHTITAIAGEDLGTRLITYIPHRLDEGYGLNAEAIKSLALSGARTIISVDCGITATEEARIAKDLGVDLIITDHHNPPSD-GSLPDAHALIHPRIPGSVYPFGELCGAGVAYKLAWRLLVLHDALPDNKVTPEHRELLLELLAFASLGTVADLVPLIDENRIIARFGLRRIQRSSFGGLRELVSASGLDGERVNAEDVGFRLGPRLNACGRMGHAAEAVELFTTAPPARAREIAQSLHRMNLERRETERAILEQAIEMAEAQGMTGPDRRAIVLASPDWHPGVVGIVCSRLVERFARPSILLCQQDGCCKGSGRSIPGFNLHAGLEACRQFLTTFGGHDMAAGLKLDDSSFDMFSESFI 427          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A7Y5W858_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5W858_9BACT)

HSP 1 Score: 480 bits (1235), Expect = 4.010e-163
Identity = 245/405 (60.49%), Postives = 307/405 (75.80%), Query Frame = 1
Query:   13 FLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAF 1227
            FL P +  LHDPSL+PDLD+AA R+L+A  + E I I+GDYDVDGVTA++IL H + A+ P+A + +Y+PHRL+EGYGLN +AI+ LA  GA VI+SVDCG+TAI PA +A++ GVDLIITDHHN P     +PDA+AVVHPRRP S YPFGELCGAGVA+KLAWR AT  A  ERVSP +RDVLL+ML  A++G +AD+VPL+DENRVI   GL RI     EGL AL+ A+GLD  S+D+EAVGF+L PRLNA GR+GHA EA+ELLT A+   A ++A+ LT+ NE+RRA E  I+ +AI +AEA+GMT   +RAIVL+   WHPG+VGIVCSRLVERF RPTIL+     +C GSGRS+D F L   +  C+E+L S GGHDMAAG+    D  +AF +AF
Sbjct:   55 FLDPSLKRLHDPSLMPDLDKAAQRLLRALHDREPIAIYGDYDVDGVTATSILWHTLHALAPDADVRTYVPHRLDEGYGLNEEAIRELAAAGAKVIISVDCGVTAIGPARVARECGVDLIITDHHNLPEDEGALPDAYAVVHPRRPGSRYPFGELCGAGVAFKLAWRAATMAAGGERVSPKVRDVLLEMLPLASMGVVADVVPLVDENRVIASWGLPRIRASTLEGLRALVRASGLDGESIDSEAVGFKLGPRLNACGRMGHAREAVELLTTARGARASEIAQMLTRKNEERRAVEKAILDEAIALAEAAGMTRDERRAIVLSRPGWHPGVVGIVCSRLVERFHRPTILMGEQDGVCHGSGRSVDGFPLAHAIARCTEYLISHGGHDMAAGLKLQRDSLDAFVEAF 459          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A2G1ZYZ5_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A2G1ZYZ5_9BACT)

HSP 1 Score: 475 bits (1222), Expect = 2.600e-161
Identity = 252/413 (61.02%), Postives = 310/413 (75.06%), Query Frame = 1
Query:    1 ESERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLI-SYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSE--RVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            E+    +  +  LHDP L+PD D+A++R++ A  N E IVIFGDYDVDG+TA+AIL H +++I  +   I +Y+PHRL+EGYGLN DAI+SLAD GA VI+SVDCGITAI+ A +AK+LGVDLIITDHHNPP T   +P+AFA+VHPR P S YPF ELCGAGVAYKLAWRL       E  +V    R++LL++L+FAALG+IAD+VPL+DENR+I K GL RI      GL  LI A GLD   +  + VGFRL PRLNA GR+GHA+EA+EL T A    A+++A  L + NE RRA E +I+ QAI++AEA GMT    RAIVLA +DWHPG+VGIVCSRLV+RF+RPTILLC+ GD  KGSGRSI AFNLHAGLEA SE L +FGGHDMAAG+S S D  + F +AFI
Sbjct:   43 EARASFETTLQDLHDPKLLPDADKASNRLIIAIENDEPIVIFGDYDVDGITATAILYHALKSIAKDTSDIRTYVPHRLDEGYGLNADAIRSLADQGAKVIISVDCGITAIKEADIAKELGVDLIITDHHNPP-TDGSIPNAFAIVHPRAPGSKYPFEELCGAGVAYKLAWRLLVLAGGDENGKVGKDKRELLLELLSFAALGTIADLVPLVDENRIITKFGLGRIPRSAFGGLRELISACGLDGEKIQADDVGFRLGPRLNACGRMGHAAEAVELFTTATGSRAREIARGLHEQNESRRATERRILEQAIKLAEAEGMTGGDTRAIVLAHDDWHPGVVGIVCSRLVDRFARPTILLCKQGDKYKGSGRSIPAFNLHAGLEATSEHLATFGGHDMAAGLSLSSDNLDTFVKAFI 454          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A5Q4EPC0_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EPC0_9BACT)

HSP 1 Score: 475 bits (1222), Expect = 2.690e-161
Identity = 246/408 (60.29%), Postives = 309/408 (75.74%), Query Frame = 1
Query:    4 SERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAF 1227
            + RF +P +  LHDPS IPDLDRAA+RILKA   +E +VI+GDYDVDGVTASAIL+H+  AI P A +  YIPHRLEEGYGL+ +A++ LA  GASV+VSVDCG+ A+EPA  A++LG+DLIITDHH PP ++D++PDA +VVHPRRPDS YPFGELCGAGVA+KLAWRLAT    SERVSP +R++LLD+LA +ALG++AD+VPL+DENRV+ + GL R+      GL+ALI AAGL    ++ E VGF LAPRLNA GR+GHA EA ELLT+   E A  +A +LT  N+ RRA E  I  QA  MAE +GMT   +RAIVLA E+WHPG+VGIVCSRLV+RF RP IL+ R   IC+GS RS+D  ++  GL  C++ L S GGHDMAAG+    ++ +AF + F
Sbjct:   45 ARRFCEPRLIHLHDPSGIPDLDRAAERILKALRASEPVVIYGDYDVDGVTASAILLHMCAAIAPGAPVSIYIPHRLEEGYGLSSEALEQLASQGASVVVSVDCGVGAVEPARRARELGLDLIITDHHTPPTSLDDLPDAHSVVHPRRPDSTYPFGELCGAGVAFKLAWRLATLATGSERVSPEMRELLLDLLALSALGAVADVVPLVDENRVMTRFGLARLKSTRFIGLNALIEAAGLAGDDINAEHVGFVLAPRLNACGRMGHAREAAELLTDVTPERADVIARQLTVQNDKRRAVERTIFEQACIMAEDAGMTMDDRRAIVLAHEEWHPGVVGIVCSRLVQRFGRPAILMQRAEGICQGSCRSVDGVSVCEGLGVCTDLLESHGGHDMAAGLRMRAERLDAFVERF 452          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A3M8FT51_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A3M8FT51_9BACT)

HSP 1 Score: 468 bits (1204), Expect = 1.370e-158
Identity = 247/413 (59.81%), Postives = 313/413 (75.79%), Query Frame = 1
Query:    1 ESERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIV-PEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSE--RVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            E++  L   ++ LHDP+L+P  D+AA+R++ A ++ + ++I+GDYDVDG+TA+AIL H +RAI  P+A + +Y+PHRL+EGYGLN DAI+SLA++GA VI+SVDCGITA + A LAK LGVDLIITDHHNPP+    +PDAFAVVHPR P S+YPF ELCGAGVAYKLAWRL       E  ++    RD+LL++LAFA+LG+IAD+VPL+DENRVI K GL RI      GL  L+ A+GLD   ++ + VGFRL PRLNA GR+GHA++A+EL T A  + A+++AE L   NE RR+ E KI+ QAIE+AEA GMT   +RAIVLA E+WHPG+VGIVCSRLV+RF+RP ILLC+     KGSGRSI AFNLHAGLEA  E L SFGGHDMAAG+S      E+F  AF+
Sbjct:   43 EAQAQLNSTLNDLHDPTLLPGADKAANRLIDALSDKQPVIIYGDYDVDGITATAILFHTLRAIGGPDADVRTYVPHRLDEGYGLNADAIRSLAEEGAKVIISVDCGITACDEADLAKSLGVDLIITDHHNPPSD-GSVPDAFAVVHPRAPGSSYPFIELCGAGVAYKLAWRLLVIACGDEQGKLPKDKRDLLLELLAFASLGTIADVVPLVDENRVITKFGLGRIPRSMFGGLRELVSASGLDGERIEADDVGFRLGPRLNACGRMGHAADAVELFTTATGKRAREIAEGLHDQNESRRSTERKILDQAIELAEAQGMTGPDRRAIVLAHENWHPGVVGIVCSRLVDRFARPAILLCKQNGKYKGSGRSIPAFNLHAGLEATCEHLASFGGHDMAAGLSLQEQNLESFVTAFV 454          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A3B1E8R9_9ZZZZ (Single-stranded-DNA-specific exonuclease RecJ (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1E8R9_9ZZZZ)

HSP 1 Score: 463 bits (1191), Expect = 3.040e-157
Identity = 242/403 (60.05%), Postives = 292/403 (72.46%), Query Frame = 1
Query:   22 PPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAFI 1230
            P + GLHDPSL+PD DRAA+RIL A   AE IVI+GDYDVDGVTA+AIL H ++ + P+A + +Y+PHR +EGYGLN +AI++LA +GA +IVSVDCGITA  PA +AK+LGVDLIITDHHNPP ++ EMP+ FA VHPR P S YPFGELCGAGVAYKLAWRL T    S RVS  ++ +LL +LA AALGSIAD+VPL+ ENR+I + GL R+      GL ALI A+GLD   +D E V F LAPRLNA GRLGHA E +++LT A  EEA  +A+ L   N  RR  E  IV +AIEMAEA+GMT   +RAIVLA   WH G++GI CSRL ERF RPT+LL  DG  C+GS RS+   NLHA LEAC   L  +GGHDMAAG+S        FQ+  I
Sbjct:    2 PSLLGLHDPSLLPDADRAAERILNAIDRAEPIVIYGDYDVDGVTATAILWHTLKELSPQADIRTYVPHRQDEGYGLNEEAIETLAAEGAGLIVSVDCGITAHSPAQVAKRLGVDLIITDHHNPPTSVAEMPEVFATVHPRVPGSEYPFGELCGAGVAYKLAWRLVTMSEGSTRVSKRLQALLLHLLALAALGSIADVVPLVGENRIIARFGLGRLKRSPFAGLRALIDASGLDGEDIDAERVAFTLAPRLNACGRLGHAREVVQMLTEASYEEAFAIADELNSTNAARRKIEENIVKEAIEMAEAAGMTSPDRRAIVLAKAGWHTGVIGIACSRLAERFCRPTVLLADDGTHCQGSARSVQGVNLHAALEACDSLLERWGGHDMAAGLSLQRQNLSRFQETLI 404          
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Match: A0A3M2C707_9BACT (Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2C707_9BACT)

HSP 1 Score: 464 bits (1193), Expect = 7.650e-157
Identity = 243/409 (59.41%), Postives = 302/409 (73.84%), Query Frame = 1
Query:    1 ESERFLKPPMSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHLIRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAIEPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELCGAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLIDENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNAVGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEMAEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDICKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAF 1227
            E+  FL+P ++ LHDPSLIPDLDRAA+R+L A    E +VI+GDYDVDGVTA+AIL H   A+ P+A + +YIPHR++EGYGLN D +++LADDGA V+V+VDCG+TA + A LA++LGVDLI+TDHH PP+T  ++PDA+AVVHP RPDSAYPF EL GAGVAYKLAWRLAT  A+SERV   IRD+L++MLA AA+G+IAD+ PL+ ENRVI + GLRR+      GL ALI A+GL    + TE VGFRLAPRLNA GR+GHA EALELL       A  LA+RLT++N++RR  E  I  QA   AE +GMT  A  AIVLA   WH G++GIVCSRLVERF  P +LL   GD   GS RS+D  ++HA L  C   L +FGGH MAAG+S + D+  AF +AF
Sbjct:   47 EARAFLEPRLTDLHDPSLIPDLDRAAERLLGALRRREPVVIWGDYDVDGVTAAAILKHTAAAVAPDAPVRAYIPHRMDEGYGLNADGLRALADDGARVVVTVDCGVTATDEARLARELGVDLIVTDHHTPPSTEADLPDAYAVVHPGRPDSAYPFPELTGAGVAYKLAWRLATLAARSERVPAPIRDLLIEMLAPAAMGTIADVAPLVGENRVIARFGLRRVRATPLLGLRALIEASGLAGERIGTEEVGFRLAPRLNACGRMGHAREALELLLTTDPARAAHLAQRLTRLNDERRRVESAITTQAARRAEDAGMTGDAAHAIVLADPGWHAGVIGIVCSRLVERFHVPAVLLQDAGDRLHGSCRSVDGLDIHAALSDCRAHLTTFGGHAMAAGLSLAADRLGAFTEAF 455          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68426.16466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9C4J9_9BACT3.120e-20069.27Single-stranded-DNA-specific exonuclease RecJ n=2 ... [more]
A0A3M2CH37_9BACT4.630e-19267.73Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
UPI001AC8BDD95.580e-16660.54Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A7V1Q1J8_9BACT1.440e-16460.63Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A7Y5W858_9BACT4.010e-16360.49Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A2G1ZYZ5_9BACT2.600e-16161.02Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A5Q4EPC0_9BACT2.690e-16160.29Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A3M8FT51_9BACT1.370e-15859.81Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]
A0A3B1E8R9_9ZZZZ3.040e-15760.05Single-stranded-DNA-specific exonuclease RecJ (Fra... [more]
A0A3M2C707_9BACT7.650e-15759.41Single-stranded-DNA-specific exonuclease RecJ n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68426contigM-pyrifera_M_contig68426:6..1235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score372.1
Seed ortholog evalue3.3e-100
Seed eggNOG ortholog1123242.JH636436_gene86
Preferred namerecJ
KEGG koko:K07462
KEGG Pathwayko03410,ko03430,ko03440,map03410,map03430,map03440
Hectar predicted targeting categoryother localisation
EggNOG free text desc.single-stranded-DNA-specific exonuclease RecJ
EggNOG OGs2IXVB@203682,COG0608@1,COG0608@2
COG Functional cat.L
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons1
Model size1230
Cds size1203
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816576.2146642-UTR-M-pyrifera_M_contig68426:5..321622816576.2146642-UTR-M-pyrifera_M_contig68426:5..32Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig68426 6..32 +
1692278056.493983-UTR-M-pyrifera_M_contig68426:5..321692278056.493983-UTR-M-pyrifera_M_contig68426:5..32Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig68426 6..32 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816576.229481-CDS-M-pyrifera_M_contig68426:32..12351622816576.229481-CDS-M-pyrifera_M_contig68426:32..1235Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68426 33..1235 +
1692278056.5136664-CDS-M-pyrifera_M_contig68426:32..12351692278056.5136664-CDS-M-pyrifera_M_contig68426:32..1235Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68426 33..1235 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68426.16466.1prot_M-pyrifera_M_contig68426.16466.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68426 33..1235 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68426.16466.1

>prot_M-pyrifera_M_contig68426.16466.1 ID=prot_M-pyrifera_M_contig68426.16466.1|Name=mRNA_M-pyrifera_M_contig68426.16466.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=401bp
MSGLHDPSLIPDLDRAADRILKAATNAESIVIFGDYDVDGVTASAILVHL
IRAIVPEAKLISYIPHRLEEGYGLNCDAIQSLADDGASVIVSVDCGITAI
EPALLAKQLGVDLIITDHHNPPATMDEMPDAFAVVHPRRPDSAYPFGELC
GAGVAYKLAWRLATKHAQSERVSPAIRDVLLDMLAFAALGSIADIVPLID
ENRVIVKHGLRRILHINNEGLHALIHAAGLDSGSVDTEAVGFRLAPRLNA
VGRLGHASEALELLTNAKREEAKQLAERLTQMNEDRRAQELKIVAQAIEM
AEASGMTEVAQRAIVLACEDWHPGIVGIVCSRLVERFSRPTILLCRDGDI
CKGSGRSIDAFNLHAGLEACSEFLGSFGGHDMAAGMSCSVDQFEAFQQAF
I
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mRNA from alignment at M-pyrifera_M_contig68426:6..1235+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68426.16466.1 ID=mRNA_M-pyrifera_M_contig68426.16466.1|Name=mRNA_M-pyrifera_M_contig68426.16466.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig68426:6..1235+ (Macrocystis pyrifera P11B4 male)
GAATCCGAGCGGTTTTTGAAACCCCCGATGAGCGGATTGCACGATCCATC GCTGATCCCCGATCTGGATCGCGCAGCGGATCGGATCCTCAAAGCCGCGA CGAATGCTGAATCGATCGTGATCTTCGGGGATTACGATGTGGACGGCGTG ACGGCGAGCGCGATCCTTGTTCATCTCATCCGAGCGATTGTTCCCGAAGC GAAACTGATCAGCTACATCCCCCACAGACTCGAAGAGGGATACGGTCTCA ACTGCGATGCGATCCAATCGCTCGCTGACGATGGAGCAAGCGTGATCGTG TCAGTGGACTGCGGGATCACTGCGATCGAGCCTGCACTGCTTGCAAAGCA GCTCGGCGTAGATCTCATCATCACTGATCATCACAATCCACCTGCGACGA TGGACGAGATGCCCGATGCGTTCGCGGTCGTGCATCCTCGTCGTCCGGAT TCTGCGTATCCATTCGGAGAGCTTTGCGGCGCTGGGGTTGCGTACAAGCT CGCTTGGAGACTCGCAACGAAGCACGCTCAGTCAGAGCGAGTTTCCCCTG CGATCCGTGATGTGCTGCTCGACATGCTCGCGTTCGCGGCGCTTGGGAGC ATCGCTGACATTGTGCCGCTGATTGATGAGAATCGAGTGATCGTCAAGCA CGGTTTGCGCCGGATCCTGCATATCAACAACGAGGGACTGCACGCGTTGA TCCACGCCGCGGGATTGGATTCAGGATCAGTGGACACAGAAGCTGTCGGA TTTCGTCTCGCTCCAAGACTCAACGCCGTCGGCCGACTCGGACATGCGAG CGAAGCACTGGAACTGCTGACGAATGCAAAGCGCGAGGAAGCAAAGCAAC TCGCTGAACGACTCACACAGATGAATGAAGATCGACGCGCGCAGGAACTC AAAATCGTTGCCCAAGCGATCGAGATGGCTGAAGCTTCAGGTATGACAGA AGTCGCGCAGCGAGCGATCGTGCTTGCTTGCGAAGACTGGCACCCCGGGA TTGTCGGGATCGTCTGCTCGCGGCTCGTCGAACGCTTCTCGCGTCCCACA ATCCTCTTGTGCCGCGACGGGGACATCTGCAAGGGCTCAGGCAGAAGCAT CGATGCATTCAATCTCCACGCAGGACTCGAAGCATGCAGCGAGTTCCTCG GATCATTCGGCGGACACGATATGGCCGCAGGGATGTCATGCAGCGTTGAT CAGTTCGAAGCGTTCCAGCAAGCATTCATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68426:6..1235+

>mRNA_M-pyrifera_M_contig68426.16466.1 ID=mRNA_M-pyrifera_M_contig68426.16466.1|Name=mRNA_M-pyrifera_M_contig68426.16466.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2406bp|location=Sequence derived from alignment at M-pyrifera_M_contig68426:6..1235+ (Macrocystis pyrifera P11B4 male)
ATGAGCGGATTGCACGATCCATCGCTGATCCCCGATCTGGATCGCGCAGC
GGATCGGATCCTCAAAGCCGCGACGAATGCTGAATCGATCGTGATCTTCG
GGGATTACGATGTGGACGGCGTGACGGCGAGCGCGATCCTTGTTCATCTC
ATCCGAGCGATTGTTCCCGAAGCGAAACTGATCAGCTACATCCCCCACAG
ACTCGAAGAGGGATACGGTCTCAACTGCGATGCGATCCAATCGCTCGCTG
ACGATGGAGCAAGCGTGATCGTGTCAGTGGACTGCGGGATCACTGCGATC
GAGCCTGCACTGCTTGCAAAGCAGCTCGGCGTAGATCTCATCATCACTGA
TCATCACAATCCACCTGCGACGATGGACGAGATGCCCGATGCGTTCGCGG
TCGTGCATCCTCGTCGTCCGGATTCTGCGTATCCATTCGGAGAGCTTTGC
GGCGCTGGGGTTGCGTACAAGCTCGCTTGGAGACTCGCAACGAAGCACGC
TCAGTCAGAGCGAGTTTCCCCTGCGATCCGTGATGTGCTGCTCGACATGC
TCGCGTTCGCGGCGCTTGGGAGCATCGCTGACATTGTGCCGCTGATTGAT
GAGAATCGAGTGATCGTCAAGCACGGTTTGCGCCGGATCCTGCATATCAA
CAACGAGGGACTGCACGCGTTGATCCACGCCGCGGGATTGGATTCAGGAT
CAGTGGACACAGAAGCTGTCGGATTTCGTCTCGCTCCAAGACTCAACGCC
GTCGGCCGACTCGGACATGCGAGCGAAGCACTGGAACTGCTGACGAATGC
AAAGCGCGAGGAAGCAAAGCAACTCGCTGAACGACTCACACAGATGAATG
AAGATCGACGCGCGCAGGAACTCAAAATCGTTGCCCAAGCGATCGAGATG
GCTGAAGCTTCAGGTATGACAGAAGTCGCGCAGCGAGCGATCGTGCTTGC
TTGCGAAGACTGGCACCCCGGGATTGTCGGGATCGTCTGCTCGCGGCTCG
TCGAACGCTTCTCGCGTCCCACAATCCTCTTGTGCCGCGACGGGGACATC
TGCAAGGGCTCAGGCAGAAGCATCGATGCATTCAATCTCCACGCAGGACT
CGAAGCATGCAGCGAGTTCCTCGGATCATTCGGCGGACACGATATGGCCG
CAGGGATGTCATGCAGCGTTGATCAGTTCGAAGCGTTCCAGCAAGCATTC
ATTATGAGCGGATTGCACGATCCATCGCTGATCCCCGATCTGGATCGCGC
AGCGGATCGGATCCTCAAAGCCGCGACGAATGCTGAATCGATCGTGATCT
TCGGGGATTACGATGTGGACGGCGTGACGGCGAGCGCGATCCTTGTTCAT
CTCATCCGAGCGATTGTTCCCGAAGCGAAACTGATCAGCTACATCCCCCA
CAGACTCGAAGAGGGATACGGTCTCAACTGCGATGCGATCCAATCGCTCG
CTGACGATGGAGCAAGCGTGATCGTGTCAGTGGACTGCGGGATCACTGCG
ATCGAGCCTGCACTGCTTGCAAAGCAGCTCGGCGTAGATCTCATCATCAC
TGATCATCACAATCCACCTGCGACGATGGACGAGATGCCCGATGCGTTCG
CGGTCGTGCATCCTCGTCGTCCGGATTCTGCGTATCCATTCGGAGAGCTT
TGCGGCGCTGGGGTTGCGTACAAGCTCGCTTGGAGACTCGCAACGAAGCA
CGCTCAGTCAGAGCGAGTTTCCCCTGCGATCCGTGATGTGCTGCTCGACA
TGCTCGCGTTCGCGGCGCTTGGGAGCATCGCTGACATTGTGCCGCTGATT
GATGAGAATCGAGTGATCGTCAAGCACGGTTTGCGCCGGATCCTGCATAT
CAACAACGAGGGACTGCACGCGTTGATCCACGCCGCGGGATTGGATTCAG
GATCAGTGGACACAGAAGCTGTCGGATTTCGTCTCGCTCCAAGACTCAAC
GCCGTCGGCCGACTCGGACATGCGAGCGAAGCACTGGAACTGCTGACGAA
TGCAAAGCGCGAGGAAGCAAAGCAACTCGCTGAACGACTCACACAGATGA
ATGAAGATCGACGCGCGCAGGAACTCAAAATCGTTGCCCAAGCGATCGAG
ATGGCTGAAGCTTCAGGTATGACAGAAGTCGCGCAGCGAGCGATCGTGCT
TGCTTGCGAAGACTGGCACCCCGGGATTGTCGGGATCGTCTGCTCGCGGC
TCGTCGAACGCTTCTCGCGTCCCACAATCCTCTTGTGCCGCGACGGGGAC
ATCTGCAAGGGCTCAGGCAGAAGCATCGATGCATTCAATCTCCACGCAGG
ACTCGAAGCATGCAGCGAGTTCCTCGGATCATTCGGCGGACACGATATGG
CCGCAGGGATGTCATGCAGCGTTGATCAGTTCGAAGCGTTCCAGCAAGCA
TTCATT
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