mRNA_M-pyrifera_M_contig68320.16440.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A5A8D566_CAFRO (AB hydrolase-1 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D566_CAFRO) HSP 1 Score: 95.9 bits (237), Expect = 1.470e-20 Identity = 58/162 (35.80%), Postives = 75/162 (46.30%), Query Frame = 1
Query: 25 PPVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDTRKEATTDRLTTWEAQAERIM----------------------------------------------------FDVVAHSYGGYVATTLARMRPDLVRRLSLLCPAGHGRYRIMRS 354
PP++V+HGL T+ SML L+S L+ LP R+VI+PDL+GFDF S T +E L +W Q + FD V HS+GG+V+ A + PD+VRRL LLCP GHGRYR RS
Sbjct: 289 PPIVVVHGLFTTSSSMLALASALSTALPHRTVILPDLMGFDFSLSRTSRER---HLPSWADQVAALTEALRQLHRAGYRSSQLAPDELVPPATVXXXXXXXXXXXXXXXXXXXXXXXCCFDWVGHSFGGWVSEQAAELYPDMVRRLVLLCPGGHGRYRRYRS 447
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: UPI000412132D (alpha/beta hydrolase n=1 Tax=Inquilinus limosus TaxID=171674 RepID=UPI000412132D) HSP 1 Score: 56.2 bits (134), Expect = 8.750e-7 Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 25 PPVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDTRKEAT-----TDRLTTWEAQAERIMFDVVAHSYGGYVATTLARMRPDLVRRLSLLCP 321
PPVI++HGL+V+++ M PL+ L+ LP V+ PDL GF G SD A D L W + +S+G V TLA P++V RL L P
Sbjct: 65 PPVILVHGLVVSSRYMEPLALSLSPALP---VLAPDLPGF--GESDKPPRALDLAGLADALHAWLGACGIARASFIGNSFGCQVLATLAIRHPEVVDRLVLQGP 163
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A0F6YM20_9DELT (Putative hydrolase n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6YM20_9DELT) HSP 1 Score: 55.1 bits (131), Expect = 2.200e-6 Identity = 39/112 (34.82%), Postives = 54/112 (48.21%), Query Frame = 1
Query: 4 GKRMQRLPPVIVIHGLLVTAQSMLPLSSCLANVLPG-RSVIVPDLLGFDFGHSDTRKEATTDRLTTWEAQAERIMFDVV---AHSYGGYVATTLARMRPDLVRRLSLLCPAG 327
G+ LPPV+V+HG+ + P LA +LP RSV+ P+L G F R L +R++ + V +S GG + AR RP+ VR L LL PAG
Sbjct: 37 GRGAGTLPPVVVVHGI---GSAGAPFGPVLARLLPHVRSVVAPELPGHGFSAPPHRALTPDTLLDVMRDVLDRVIDEPVILCGNSLGGAIVLRYARDRPEKVRGLVLLSPAG 145
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: UPI001C3D77F2 (alpha/beta fold hydrolase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D77F2) HSP 1 Score: 53.9 bits (128), Expect = 5.340e-6 Identity = 43/105 (40.95%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 28 PVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDT--RKEATTDRLTTWEAQAERIMFDVVAHSYGGYVATTLARMRPDLVRRLSLLCPAGHGR 336
PV+++HGL V+A S+ PL+ LA V+V DL GF SD A D L A +V HS+G +VAT LA P VR L LL PA GR
Sbjct: 35 PVVMVHGLGVSAGSLGPLAEELAR---DHVVLVCDLPGFGRTDSDAIWSTGAAADVLEEVLALRGMGRVTLVGHSWGCHVATVLAARHPGRVRALVLLSPAFDGR 136
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A839YKM8_9RHOB (Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Limimaricola variabilis TaxID=1492771 RepID=A0A839YKM8_9RHOB) HSP 1 Score: 53.9 bits (128), Expect = 6.830e-6 Identity = 39/110 (35.45%), Postives = 51/110 (46.36%), Query Frame = 1
Query: 28 PVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDTRKEATTDRLTTWEAQAERIMFD--------VVAHSYGGYVATTLARMRPDLVRRLSLLCPAGHG 333
P++++HG A PL L N R +I DL G S +K L QA FD +V HS GG +ATT+A +RP L+R L L+ PAG G
Sbjct: 228 PIVLVHGFAADATGWAPLEKALGNA---REIIRVDLACH--GRSPLKKIENFAGLARLAVQA----FDGLNLEAAHLVGHSLGGAIATTIADIRPRLIRSLGLIAPAGLG 328
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A0F6YNJ3_9DELT (Putative hydrolase n=3 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6YNJ3_9DELT) HSP 1 Score: 52.4 bits (124), Expect = 2.040e-5 Identity = 37/111 (33.33%), Postives = 56/111 (50.45%), Query Frame = 1
Query: 4 GKRMQRLPPVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDTRKEATTDRLTTWEAQAERIMFD---VVAHSYGGYVATTLARMRPDLVRRLSLLCPAG 327
G+ LPPV+++HG+ A P+ + + + R+VI P+L G + + A A +R++ + VV +S GG VA AR RP+ VR L LL PAG
Sbjct: 38 GRGHGALPPVVMVHGIGSAAAPFAPVIARVQEHV--RAVIAPELPGHGWSAPPRGRLAPDTLFEVMGAVIDRLIDEPAVVVGNSLGGAVALDYARTRPEKVRALVLLSPAG 146
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: UPI0006793B4E (alpha/beta fold hydrolase n=1 Tax=Acidobacterium ailaaui TaxID=1382359 RepID=UPI0006793B4E) HSP 1 Score: 52.0 bits (123), Expect = 2.810e-5 Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 25 PPVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSD------TRKEATTDRLTTWEAQAERIMFDVVAHSYGGYVATTLARMRPDLVRRLSLLCPA 324
P +++IHGLL +A++ +P CL + +V D L + G SD A DR+ + QA DV+ S+GG +A LA P+LVR L L PA
Sbjct: 34 PSLLLIHGLLGSAEAWVP---CLPRLAEDSTVYAVDTL--NIGRSDRVSGLDASLSAQADRMARFMGQAGIHRADVLGTSHGGAIALMLAARHPELVRSLLLHAPA 134
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A2M7H4Q1_9BACT (AB hydrolase-1 domain-containing protein n=1 Tax=Candidatus Kerfeldbacteria bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_45_12 TaxID=2014247 RepID=A0A2M7H4Q1_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 3.450e-5 Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 1
Query: 25 PPVIVIHGLLVTAQSMLPLSSCLANVLPG-RSVIVPDLLGFDFGHSDTRKEATTDRLTTWEAQAERIMF---DVVAHSYGGYVATTLARMRPDLVRRLSLLCPAG 327
P ++ +HG +A+S L + L N L R +I DL GF + + D + E + D+V HS+GG +AT L RPDLVR+++ L PAG
Sbjct: 29 PVILFLHGWGGSAESFQTLMTELNNQLSTHRHLIALDLPGFGESAPPLQAWSVADYSSCVVKYIEALSIGQVDLVVHSFGGRIATKLLNDRPDLVRKIAYLAPAG 133
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A1J0PD62_9SYNE (Alpha/beta hydrolase n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A1J0PD62_9SYNE) HSP 1 Score: 50.4 bits (119), Expect = 9.440e-5 Identity = 39/108 (36.11%), Postives = 53/108 (49.07%), Query Frame = 1
Query: 28 PVIVIHGLLVTAQSMLPLSSCLANVLPGRS-VIVPDLLGFDFG-------HSDTRKEATTDRLTTWEAQAERIMFDVVAHSYGGYVATTLARMRPDLVRRLSLLCPAG 327
P++++HG S L LA +L GR+ + +PDL GF F +S A D + A + V+ S GG VA LAR RP+ +RRL LL PAG
Sbjct: 48 PLLLLHGF----DSSLLEFRRLAPLLAGRAQLFIPDLFGFGFSPRCRDGPYSPAGVLAHLDAMLGAIAGLDARPVGVIGASMGGAVAVELARRRPERIRRLLLLAPAG 151
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Match: A0A5C4LX06_9PSEU (Alpha/beta hydrolase n=1 Tax=Amycolatopsis alkalitolerans TaxID=2547244 RepID=A0A5C4LX06_9PSEU) HSP 1 Score: 50.4 bits (119), Expect = 9.640e-5 Identity = 40/124 (32.26%), Postives = 57/124 (45.97%), Query Frame = 1
Query: 31 VIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGF-DFGHSDTRKEATTDRLTTWEAQAERI-----MFDVVAHSYGGYVATTLARMRPDLVRRLSLL----CPAGHGRYRIMRSVAGAVY 372
V+++HGL T + +A LPGR V++PDL GF D G R+ A ER+ ++ HS+G VA +A P+LV RL L+ PA G +M + A Y
Sbjct: 36 VLMVHGLRGTHHGL----ELIAEALPGRRVVIPDLPGFGDSGPLAGRRHDVDGYAHAVVALIERLGGRTRPVVLLGHSFGSVVAARVASSAPELVHRLVLVNPIATPALRGPRVVMSGLTSAYY 155 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68320.16440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68320.16440.1 >prot_M-pyrifera_M_contig68320.16440.1 ID=prot_M-pyrifera_M_contig68320.16440.1|Name=mRNA_M-pyrifera_M_contig68320.16440.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MQRLPPVIVIHGLLVTAQSMLPLSSCLANVLPGRSVIVPDLLGFDFGHSDback to top mRNA from alignment at M-pyrifera_M_contig68320:110..601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68320.16440.1 ID=mRNA_M-pyrifera_M_contig68320.16440.1|Name=mRNA_M-pyrifera_M_contig68320.16440.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig68320:110..601- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68320:110..601- >mRNA_M-pyrifera_M_contig68320.16440.1 ID=mRNA_M-pyrifera_M_contig68320.16440.1|Name=mRNA_M-pyrifera_M_contig68320.16440.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig68320:110..601- (Macrocystis pyrifera P11B4 male)back to top |