mRNA_M-pyrifera_M_contig6831.16438.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: D8LQW6_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW6_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.890e-72 Identity = 119/173 (68.79%), Postives = 141/173 (81.50%), Query Frame = 1
Query: 1 SHYYTSLWNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
SHYY SLWNVI EP+ME+KL ALP ETMTDMPHC+YPEGLY A+K M AIGHP+YVTENGIADADDTRRR +NR++ +T ++ +A + +R + + + R LYL+RYLYALSRAI +GCDVRGYFYWSLYDNFEWCEG +GPRFGLYEV+FDTQ+RTLRDSSK
Sbjct: 246 SHYYASLWNVIFEPDMEEKLRALPAETMTDMPHCIYPEGLYCALKAMSAIGHPIYVTENGIADADDTRRRW-VLSNRHSENTVRPDQQVGSATENQANRGSRPKDQIRRLYLKRYLYALSRAIKDGCDVRGYFYWSLYDNFEWCEG---YGPRFGLYEVDFDTQRRTLRDSSK 414
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A836CK19_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK19_9STRA) HSP 1 Score: 180 bits (457), Expect = 5.200e-53 Identity = 91/172 (52.91%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 1 SHYYTSLWNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSS 516
SHYY SLWN+I EP +E KL+ALP E MTDMP C+YPEGLYSA+KTM +G P+ VTENGIAD D RR +LY++RYLYALSRAI +G DV GY+YWSLYDNFEWCEG + +FGLY VNFDTQ+R+LR ++
Sbjct: 186 SHYYVSLWNIITEPVLEAKLMALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRR---------------------------------------YLYIRRYLYALSRAIQDGVDVIGYYYWSLYDNFEWCEG---YHMKFGLYAVNFDTQERSLRPAA 315
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A836CL70_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL70_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.440e-47 Identity = 88/172 (51.16%), Postives = 108/172 (62.79%), Query Frame = 1
Query: 1 SHYYTSLWNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSS 516
+HYY SLWN++ EP +E KL ALP E MTDMP C+YPEGLYSA+KTM +G P+ VTENGIAD D RR +LY++RYLYALSRAI +G DV GY+YWSLYD+FEWCEG + +FGLY VNFDTQ+R+LR ++
Sbjct: 790 NHYYVSLWNIMTEPVLEAKLKALPQEIMTDMPQCVYPEGLYSALKTMATLGKPIIVTENGIADKHDDRR---------------------------------------YLYIRRYLYALSRAIQDGVDVIGYYYWSLYDSFEWCEG---YHMKFGLYAVNFDTQERSLRPAA 919
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A7S4D568_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D568_HETAK) HSP 1 Score: 147 bits (370), Expect = 4.590e-38 Identity = 78/175 (44.57%), Postives = 99/175 (56.57%), Query Frame = 1
Query: 1 SHYYTSLWNVIVE--PNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
SHY S+W + P+ E+KL A+P E TDMPH MYPEG Y A++ + + P+ VTENGIAD DD+ R +Y+ RY+YA+S+AI GCDVRGYFYWSL DNFEW G +GP+FGLYEV+F TQ+R LRD +K
Sbjct: 437 SHYCVSVWRTFFQGVPD-EEKLAAMPREIYTDMPHVMYPEGFYRALRELQTLNLPIIVTENGIADKDDS---------------------------------------CRQMYIARYMYAMSKAIHNGCDVRGYFYWSLLDNFEWSLG---YGPKFGLYEVDFKTQERRLRDGAK 568
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A6H5KT44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT44_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.110e-35 Identity = 94/214 (43.93%), Postives = 117/214 (54.67%), Query Frame = 1
Query: 1 SHYYTSLWNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRT-------RKTNNRNNRSTATVPRRRRTAYR-SNTSRKTPTRSRSRWLYLQRYLYALSRA--------------IGEG--------CDVRGYFYWSLYDNFEW----CEGEKR-------FGPRFGLYEVNFDTQQRTLRDSSK 519
SHYY SLW+VI EP+ME+KL ALP ETMTDMPHC+YPEGLY A+K M IGHP+YVTENGIADADDTRRR N++ NR+T++ T S S+ S ++ + L A + EG C +R S N EG++R +GPRFGL+EV+F TQ+RTLRDSSK
Sbjct: 54 SHYYASLWSVIFEPDMEEKLRALPAETMTDMPHCIYPEGLYCALKAMSVIGHPIYVTENGIADADDTRRRCVAERPRGDNPNDQGNRTTSSYVTFTETLRLISEASKNLVAMDASNTIFDAKRLIGRKFADPTEASDMKHRPFDVAEGPGGKPMIECLLRARRSSSRLRNLRHGAGQAEGDRRGLPRQGGYGPRFGLFEVDFGTQRRTLRDSSK 267
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A139AMZ0_GONPJ (Glycoside hydrolase family 1 protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMZ0_GONPJ) HSP 1 Score: 130 bits (328), Expect = 1.710e-32 Identity = 69/146 (47.26%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 82 MTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
MTDM + +YPEG Y A+K M ++ PV VTENGIADA+DTRR L+L+RYLYA+S+AI EG DVRGYF+W+L DNFEW EG + RFGL+E NF+TQ+RT+RDS K
Sbjct: 380 MTDMHYSVYPEGFYHAIKDMASLKKPVVVTENGIADANDTRRH---------------------------------------LFLRRYLYAMSKAISEGIDVRGYFHWTLMDNFEWAEG---YDSRFGLFETNFETQERTMRDSCK 483
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A2D6LWJ7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2D6LWJ7_9BACT) HSP 1 Score: 119 bits (299), Expect = 2.910e-31 Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 82 MTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSS 516
MTDM + +YPEGLY +++ + +G P+++TENGIADA D RR T +++RYLYA+SRA+ E DVRGYFYW+L DNFEW EG + +FGLYEVNF TQ+R LRD +
Sbjct: 44 MTDMAYPIYPEGLYRSIERISELGVPIFITENGIADAQDDRRAT---------------------------------------FIERYLYAVSRALEEDYDVRGYFYWTLMDNFEWSEG---YDMKFGLYEVNFATQERKLRDGA 146
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A7C2TT33_9BACT (Glycosyl hydrolase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2TT33_9BACT) HSP 1 Score: 124 bits (312), Expect = 1.630e-30 Identity = 72/177 (40.68%), Postives = 95/177 (53.67%), Query Frame = 1
Query: 4 HYYTSL-----WNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
+YY+ L WN P L P E MTDM + +Y EGLY A+KT+ ++ P+Y+TENGIADA D RR L+ +RYL+AL++AI +GCDVRGYFYWSL DNFEW EG + +FGLY++NF TQ+R LR ++
Sbjct: 324 NYYSHLHVKFRWN----PPQFFALTHRPDEIMTDMIYPIYAEGLYRAIKTVASLNVPIYITENGIADAKDDRRD---------------------------------------LFFRRYLFALAQAIKDGCDVRGYFYWSLMDNFEWAEG---YDMKFGLYKMNFQTQERKLRKGAE 454
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A3A0DJS8_9BACT (Glycoside hydrolase family 1 protein n=2 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DJS8_9BACT) HSP 1 Score: 124 bits (312), Expect = 1.700e-30 Identity = 67/150 (44.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 70 PTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
P + MTDMP +YPEG Y AVK + + P+YVTENGIADA D RR L+++RYLYALS+A+ G DVRGYFYWSL DNFEW EG + +FGLYEV+F TQ+R LR+ ++
Sbjct: 348 PNQIMTDMPFAVYPEGFYRAVKEISRLNAPIYVTENGIADAKDDRRE---------------------------------------LFIRRYLYALSQALKAGEDVRGYFYWSLLDNFEWAEG---YDMKFGLYEVDFATQKRKLREGAR 455
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Match: A0A2E8KW13_9BACT (Beta-glucosidase n=2 Tax=root TaxID=1 RepID=A0A2E8KW13_9BACT) HSP 1 Score: 123 bits (308), Expect = 6.200e-30 Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query: 25 NVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIGHPVYVTENGIADADDTRRRTRKTNNRNNRSTATVPRRRRTAYRSNTSRKTPTRSRSRWLYLQRYLYALSRAIGEGCDVRGYFYWSLYDNFEWCEGEKRFGPRFGLYEVNFDTQQRTLRDSSK 519
N + PN + P E MTDM + +YPE +Y ++K + +G P+++TENGIADA D RR LY+ RY+ A++R+I EG DVRGYFYWSL DNFEW EG + +FGLY+VNF TQ+R LRD S+
Sbjct: 331 NSHLNPNQFFTIEFYPHEPMTDMNYPIYPEAIYRSIKRVSELGVPIFITENGIADAKDDRRA---------------------------------------LYIDRYIRAVARSIQEGSDVRGYFYWSLMDNFEWSEG---YNMKFGLYKVNFQTQERRLRDGSR 453 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6831.16438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6831.16438.1 >prot_M-pyrifera_M_contig6831.16438.1 ID=prot_M-pyrifera_M_contig6831.16438.1|Name=mRNA_M-pyrifera_M_contig6831.16438.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp SHYYTSLWNVIVEPNMEDKLLALPTETMTDMPHCMYPEGLYSAVKTMCAIback to top mRNA from alignment at M-pyrifera_M_contig6831:165..3360+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6831.16438.1 ID=mRNA_M-pyrifera_M_contig6831.16438.1|Name=mRNA_M-pyrifera_M_contig6831.16438.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3196bp|location=Sequence derived from alignment at M-pyrifera_M_contig6831:165..3360+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6831:165..3360+ >mRNA_M-pyrifera_M_contig6831.16438.1 ID=mRNA_M-pyrifera_M_contig6831.16438.1|Name=mRNA_M-pyrifera_M_contig6831.16438.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig6831:165..3360+ (Macrocystis pyrifera P11B4 male)back to top |