mRNA_M-pyrifera_M_contig68283.16435.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A9UUU5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UUU5_MONBE) HSP 1 Score: 283 bits (725), Expect = 5.150e-87 Identity = 158/386 (40.93%), Postives = 229/386 (59.33%), Query Frame = 1
Query: 1 SCPSDSIPHSNRSSSTPCTAAPMGAECFFSCEEGFIRRGRHVCQTYATSGHT*INQTYFGGECVPLCDPKRATCNTGDIPIR---WEEEG-CLVTTCMEENEALVQ-LGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQGGMGMTGLGLIVECAAAELGWLERDDLVERVNQTLSSLAGKRKGFVVARNADGWAPTFVNSNTGASLQPPNSTAYSTLATGLNAAGVLFAAQYVGTEE----------IWALAEEIVASVRWETLLCSNGMTNTSGNEVCMV-KSLNGSICSATEAPEADGYYQYYELEYTVWITYER-CRMEGNGSCKNPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSDPDFL 1107
SC + +S+R+ S PCT +GAEC ++C G++ GRHVCQ+Y+T+ H + + GG C+ LC A C + +P+R +++G CL T C L+Q L R ++++W RN TGI++DHV+L + + QDW QG +G+TGLG+ EC A LG++ D + RV+ TL S+ GF + RNA GW PTFV++ TGA++ P ++ YS+LATGL+ AG LFA YV + + LA + +V W TLLC+ +++ + + M+ S +G CSA E PE+DGYYQ++EL YTV + Y C + +C PA M+ RW GR HPN + PLLS WS Y+V LP + HAFN + DFL
Sbjct: 70 SCAPSVLANSDRNDSQPCTGQ-LGAECAYTCLPGYVPFGRHVCQSYSTNEHVVYDHQFAGGHCLRLCSSSPA-CTSPALPLRVNSTDKDGPCLHTQCYANQSVLLQSLSRGSYELWMRARNNETGIYLDHVDLTRSPADQDWQQGAIGVTGLGMAAECVAHALGYISDDQFLARVSLTLRSILSLTTGFKLDRNAHGWIPTFVDTRTGAAMNPDDTNRYSSLATGLDTAGALFARTYVLSNPQLCSSAQGAVLIELATQAFEAVDWTTLLCNGTHIDSNSSGLPMLFDSTDG--CSAVEFPESDGYYQFFELHYTVALAYHAACTVSQTLAC--PAFDTMFRRWQGRAQHPNQAFEGLPLLSEWSAYVVQLPYYMVHAFNGNADFL 449
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A0A812XA19_9DINO (PETH protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812XA19_9DINO) HSP 1 Score: 239 bits (611), Expect = 1.440e-69 Identity = 141/391 (36.06%), Postives = 195/391 (49.87%), Query Frame = 1
Query: 19 IPHSNRSSSTPCTAAPMGAECFFSCEEGFIRRGRHVCQTYATSGHT*INQTYFGGECVPLCDPKRATCNTGDIPIR---WEEEG-CLVTTCMEENEALVQLGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQGGMGMTGLGLIVECAAAELGWLERDDLVERVNQTLSSLAG------KRKGFVVARNADGWAPTFVNSNTGASLQPPNSTA---YSTLATGLNAAGVLFAAQYV---------GTEEIWALAEEIVASVRWETLLCSNGMTNT------SGNEVCMVKSLNGSICSATEAPEADGYYQYYELEYTVWITYER-CRMEGNGSCKNPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSDPDF 1104
IP SNR C A+ +G EC + C EG+I GRHVCQT ++++FGG C LC C G +P+R ++ G C+ T C E++A L R N++VW RN +G + DH++L + G TG+GLI+EC A +GW+ DL+ERVN TLSS A + R GW P + +TGA L +S ++TGL GV+F YV T I L E+++ V W ++LC + +G + M+ + G +C+ PEADGYY + E W+ R C G +C PAI MW++ GR HPNLE HPLLS WS Y+V +P +TTH NS P F
Sbjct: 128 IPFSNRKPGNECIASKLGDECSYQCNEGYIAVGRHVCQTIVIQNQVWKDKSFFGGNCWRLCAATSGPCPAGQVPLRVNTTDDLGPCMQTLCKTEDDAFKNLARGNYEVWRRSRNDYSGSYTDHIDLDTGKA----KLGSSDTTGMGLIMECVAHSMGWISDQDLLERVNLTLSSFANIPPPAKDGMSWNFTRGPKGWVPRYFEESTGALLAEAGDKVDGVWSVMSTGLFYVGVMFVQTYVLNHWVRRSDTTGMIAILTEKLMDMVDWHSMLCLQAFASPEVVEGYNGTGIPMLMNNKG-LCTGISWPEADGYYPFTEEITAAWLADRRVCGHRGQENCSMPAIHTMWNKVVGRALHPNLEIFGHPLLSDWSSYVVQIPYYTTHPVNSFPAF 513
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A0A1Q9DC94_SYMMI (Ferredoxin--NADP(+) reductase n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DC94_SYMMI) HSP 1 Score: 240 bits (612), Expect = 1.510e-67 Identity = 141/391 (36.06%), Postives = 195/391 (49.87%), Query Frame = 1
Query: 19 IPHSNRSSSTPCTAAPMGAECFFSCEEGFIRRGRHVCQTYATSGHT*INQTYFGGECVPLCDPKRATCNTGDIPIR---WEEEG-CLVTTCMEENEALVQLGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQGGMGMTGLGLIVECAAAELGWLERDDLVERVNQTLSSLAG------KRKGFVVARNADGWAPTFVNSNTGASLQPPNSTA---YSTLATGLNAAGVLFAAQYV---------GTEEIWALAEEIVASVRWETLLCSNGMTNT------SGNEVCMVKSLNGSICSATEAPEADGYYQYYELEYTVWITYER-CRMEGNGSCKNPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSDPDF 1104
IP SNR C A+ +G EC + C EG+I GRHVCQT ++++FGG C LC C G +P+R ++ G C+ T C E++A L R N++VW RN +G + DH++L + G TG+GLI+EC A +GW+ DL+ERVN TLSS A + R GW P + +TGA L +S ++TGL GV+F YV T I L E+++ V W ++LC + +G + M+ + G +C+ PEADGYY + E W+ R C G +C PAI MW++ GR HPNLE HPLLS WS Y+V +P +TTH NS P F
Sbjct: 542 IPFSNRKPGNECVASKLGDECSYQCNEGYIAVGRHVCQTIVIQNQVWKDKSFFGGNCWRLCAATSGPCPAGQVPLRVNTTDDLGPCMQTLCKTEDDAFKNLARGNYEVWRRSRNDYSGCYTDHIDLDTGKA----KLGSSDTTGMGLIMECVAHSMGWISDQDLLERVNLTLSSYANIPPPAKAGMSWNFTRGPKGWVPRYFEESTGALLAEAGDKVDGVWSVMSTGLFYVGVMFVQTYVLNHWVRRSDTTGMIARLTEKLMDMVDWHSMLCLQAFASPDVVEGYNGTGIPMLMNNKG-LCTGISWPEADGYYPFTEEITAAWLADRRVCGHRGQENCSMPAIHTMWNKVVGRALHPNLEIFGHPLLSDWSSYVVQIPYYTTHPVNSFPAF 927
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A0A813AEU1_SYMMI (Ferredoxin--NADP(+) reductase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813AEU1_SYMMI) HSP 1 Score: 240 bits (612), Expect = 3.830e-67 Identity = 141/391 (36.06%), Postives = 195/391 (49.87%), Query Frame = 1
Query: 19 IPHSNRSSSTPCTAAPMGAECFFSCEEGFIRRGRHVCQTYATSGHT*INQTYFGGECVPLCDPKRATCNTGDIPIR---WEEEG-CLVTTCMEENEALVQLGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQGGMGMTGLGLIVECAAAELGWLERDDLVERVNQTLSSLAG------KRKGFVVARNADGWAPTFVNSNTGASLQPPNSTA---YSTLATGLNAAGVLFAAQYV---------GTEEIWALAEEIVASVRWETLLCSNGMTNT------SGNEVCMVKSLNGSICSATEAPEADGYYQYYELEYTVWITYER-CRMEGNGSCKNPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSDPDF 1104
IP SNR C A+ +G EC + C EG+I GRHVCQT ++++FGG C LC C G +P+R ++ G C+ T C E++A L R N++VW RN +G + DH++L + G TG+GLI+EC A +GW+ DL+ERVN TLSS A + R GW P + +TGA L +S ++TGL GV+F YV T I L E+++ V W ++LC + +G + M+ + G +C+ PEADGYY + E W+ R C G +C PAI MW++ GR HPNLE HPLLS WS Y+V +P +TTH NS P F
Sbjct: 1191 IPFSNRKPGNECVASKLGDECSYQCNEGYIAVGRHVCQTIVIQNQVWKDKSFFGGNCWRLCAATSGPCPAGQVPLRVNTTDDLGPCMQTLCKTEDDAFKNLARGNYEVWRRSRNDYSGCYTDHIDLDTGKA----KLGSSDTTGMGLIMECVAHSMGWISDQDLLERVNLTLSSYANIPPPAKAGMSWNFTRGPKGWVPRYFEESTGALLAEAGDKVDGVWSVMSTGLFYVGVMFVQTYVLNHWVRRSDTTGMIARLTEKLMDMVDWHSMLCLQAFASPDVVEGYNGTGIPMLMNNKG-LCTGISWPEADGYYPFTEEITAAWLADRRVCGHRGQENCSMPAIHTMWNKVVGRALHPNLEIFGHPLLSDWSSYVVQIPYYTTHPVNSFPAF 1576
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A0A813LBQ1_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LBQ1_POLGL) HSP 1 Score: 226 bits (575), Expect = 8.960e-64 Identity = 143/391 (36.57%), Postives = 206/391 (52.69%), Query Frame = 1
Query: 19 IPHSNRSSSTPCTAAPMGAECFFSCEEGFIRRGRHVCQTYATSGHT*INQTYFGGECVPLCDPKRATCNTGDI-PIR---WEEEG-CLVTTCMEE-NEALVQLGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQ--GGMGMTGLGLIVECAAAELGWLERDDLVERVNQTLSSLAGKRKGFVVARNADGWAPTFVNSNTGASLQPP---------NSTAYSTLATGLNAAGVLFAAQY---VGTE----EIWALAEEIVASVRWETLLC------SNGMTNTSGNEVCMVKSLNGSICSATEAPEADGYYQYYELEYTVWITYERC--RMEGNGSCKNPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSD 1095
I SNR+ + C A G EC + C EG+I GRHVCQT G T +FGGEC LC A C PIR ++E+G CL T CM +EAL L R N+++W +GR +G++ D V+L QD GG+ MTG+GLI+EC A +GW++RD+L+ R+ +TLSSL V++ DGW P FV SL+P +S ++TG+ AG+ F Y VGT ++ ALAE++ V W T++C + M +G + M+++ +G C + P DGYY++ E WI +E+ + G C IQ MW+ GR+FHP+ A + +L+ WS Y+V +P + HA NSD
Sbjct: 207 IQDSNRTGTDACFATQHGDECVYQCNEGYIPVGRHVCQTIIIRGKTWKENAFFGGECYRLCSDSAAPCPVNKATPIRVNSFDEQGNCLRTKCMHSADEALRNLARGNYEIWRLGRASPSGMYQDSVHLN---GPQDLGPKLGGLDMTGIGLIMECVADAMGWIDRDELLSRLGETLSSLD------VISHAKDGWLPRFVELP---SLKPLAEGTEGSAFTGKTWSVMSTGIVYAGIYFVKTYLQNVGTSGAAGDVVALAEKLTNRVNWRTMMCLQKFGSPDVMDGWNGTGIPMLQTSDGE-CISVLWPSRDGYYEFNEEITASWIAFEKVCGEFQRTGYCAAVNIQNMWNAVQGRRFHPDSTAAGYEILTKWSAYVVQIPYYMVHAVNSD 584
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Match: A0A813DYK5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DYK5_POLGL) HSP 1 Score: 102 bits (254), Expect = 5.990e-21 Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 1
Query: 640 YSTLATGLNAAGVLFAAQYVGTE----------EIWALAEEIVASVRWETLLCSNGMTNTS-GNEVCMVKSLNGS--------------ICSATEAPEADGYYQYYELEYTVWITYE-----RCRMEGNGSCK---------------NPAIQAMWDRWDGRKFHPNLEYASHPLLSMWSCYIVHLPLFTTHAFNSDPDFL 1107
+ST+ATGL +GV+F YVG ++ L +++VA VRW+TL+C+ N S G +VK+ S IC P DG+Y + E+ T+W+ YE R + + P++ W W R+F PN + S+ L S+W CY+V P +T HAFNSDP +L
Sbjct: 10 WSTMATGLLYSGVMFVRTYVGRSLQTLPAAEAAQVLRLCDDLVAMVRWDTLMCNYQFGNASEGIPALIVKAPPNSSHATGLPYLHTSQGICEEVLWPNTDGFYDFNEMMSTLWLAYEFTSGNRVLAPATAAAEPATTIXXXXXXXXXPTPSLVRAWGAWQSRRFKPNYRFGSYALPSLWPCYVVQFPYYTVHAFNSDPAWL 210 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68283.16435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68283.16435.1 >prot_M-pyrifera_M_contig68283.16435.1 ID=prot_M-pyrifera_M_contig68283.16435.1|Name=mRNA_M-pyrifera_M_contig68283.16435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp MEENEALVQLGRSNFQVWEMGRNPTTGIFMDHVNLRVNASGQDWNQGGMGback to top mRNA from alignment at M-pyrifera_M_contig68283:1..1180- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68283.16435.1 ID=mRNA_M-pyrifera_M_contig68283.16435.1|Name=mRNA_M-pyrifera_M_contig68283.16435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1180bp|location=Sequence derived from alignment at M-pyrifera_M_contig68283:1..1180- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68283:1..1180- >mRNA_M-pyrifera_M_contig68283.16435.1 ID=mRNA_M-pyrifera_M_contig68283.16435.1|Name=mRNA_M-pyrifera_M_contig68283.16435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig68283:1..1180- (Macrocystis pyrifera P11B4 male)back to top |