mRNA_M-pyrifera_M_contig68277.16433.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68277.16433.1
Unique NamemRNA_M-pyrifera_M_contig68277.16433.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: D7FNG3_ECTSI (Flavin-binding monooxygenase-like subfamily n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG3_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 8.780e-83
Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            KRVLVVGSGESGSDICNEISK+A+STGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVG+VNQLAKRFVASMGPADEEA VLKKIAELNLGQ TSAFSKFGCKNAGFVEAMVLRGT+LHRGGFEL
Sbjct:  203 KRVLVVGSGESGSDICNEISKFASSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGYVNQLAKRFVASMGPADEEAQVLKKIAELNLGQCTSAFSKFGCKNAGFVEAMVLRGTSLHRGGFEL 336          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A6V2ZPT4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZPT4_HETAK)

HSP 1 Score: 212 bits (539), Expect = 1.460e-63
Identity = 98/134 (73.13%), Postives = 114/134 (85.07%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            ++V+VVG+GESGSDICNEISK+A+   +  RGKHGHLIPRKQADGRVTDLNTNRCRYSNPYV GDW+G+ NQ+AK+FVA MG  +E+  VL KI E N+ Q TSAFSKFGCKNAGFVEA+V+RGT LHR  FEL
Sbjct:  207 QKVMVVGAGESGSDICNEISKHASKCAIVCRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVFGDWIGYANQMAKKFVAQMGEQNEDNKVLAKIGEYNMHQGTSAFSKFGCKNAGFVEAVVVRGTELHRDAFEL 340          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A7S2UXY2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXY2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.530e-61
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFE 399
            KRV++VG+GESGSDICNEISK+A+ST +  RGKHGHLIPR Q DGRVTDLNTNRCRYSNPYV GD +G+ NQLAK+FVA+MGP +E   VL KI ELN+ Q TSAFSKFGCKNAGFVEA+V RG  LHR  +E
Sbjct:  192 KRVMIVGAGESGSDICNEISKHASSTAIVCRGKHGHLIPRIQTDGRVTDLNTNRCRYSNPYVFGDAIGWTNQLAKKFVATMGPKNETNKVLAKIGELNMHQQTSAFSKFGCKNAGFVEAIVQRGCELHRDSWE 324          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A8J2SBC1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBC1_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.790e-59
Identity = 99/137 (72.26%), Postives = 111/137 (81.02%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPAD---EEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            KRVLVVG+GESGSDI NEI+  A+   + +RGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVG+VNQLAK+FVA  G  D   EE  +L+KI ELN+ Q TSAFSKFGCKN GFV AMV +G  LHR  F+L
Sbjct:  261 KRVLVVGAGESGSDITNEIASEASKVAIVVRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGYVNQLAKKFVAKHGSQDKPMEERKILQKIGELNIEQGTSAFSKFGCKNEGFVTAMVCKGAELHRDAFKL 397          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A7S0TC76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TC76_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.860e-59
Identity = 98/138 (71.01%), Postives = 110/138 (79.71%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPA----DEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            +RVLVVG+GESGSDICNEI++ A    +A+RGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVG+VNQ+AK+FVA  G        E  VL+KI ELN+ Q TSAFSKFGCKN GFV AMV +G  LHR  F L
Sbjct:  271 QRVLVVGAGESGSDICNEIAEEADKVAIAVRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGYVNQMAKKFVAKYGGGKHVDQSERAVLQKIGELNMSQGTSAFSKFGCKNEGFVTAMVTKGAELHRDTFVL 408          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A7S2HPS1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPS1_9STRA)

HSP 1 Score: 199 bits (506), Expect = 5.570e-58
Identity = 98/138 (71.01%), Postives = 106/138 (76.81%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVA----SMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            KRVLV+G+GESGSDICNEI+  A    + +R KHGHLIPRKQ DGRVTDLNTNRCRYSNPY LGDWVG+ NQ AKRFVA      G  DE+  VL KI ELNL QNTSAFSKFGCKN GFV AMV +GT LHR  F L
Sbjct:  288 KRVLVIGAGESGSDICNEIASEAAQVAIVVRNKHGHLIPRKQTDGRVTDLNTNRCRYSNPYCLGDWVGWANQHAKRFVALNGSGDGKTDEDRQVLAKIGELNLKQNTSAFSKFGCKNEGFVTAMVTKGTELHRDAFHL 425          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A836C7U5_9STRA (Flavin-binding monooxygenase-like subfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U5_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.540e-57
Identity = 95/134 (70.90%), Postives = 106/134 (79.10%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            KRVLVVG+GESGSDICNEIS++A +TG+ IR KHGH+IPR Q  GRVTDLNTNRCRYSNPYVLG WVG+ NQ AKR    +     E  VL K++ELNL Q TSAFSKFGCKNAGFVEA+V RG  LHRG F L
Sbjct:  196 KRVLVVGAGESGSDICNEISRHAAATGMGIRRKHGHIIPRVQRHGRVTDLNTNRCRYSNPYVLGAWVGWANQHAKRLSLCLARDTPETRVLAKVSELNLRQGTSAFSKFGCKNAGFVEAVVCRGATLHRGAFRL 329          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: F0XYZ2_AURAN (SET domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ2_AURAN)

HSP 1 Score: 199 bits (507), Expect = 9.270e-57
Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFVASMG--PADE--EAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL 402
            +RVL+VG+GESGSDICNEI+  A    + +RGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVG+ NQLAK+FVA  G  P+ E  E  VL+KI ELN+ Q TSAFSKFGCKN GFV AMV +   LHR GF+L
Sbjct:  649 QRVLIVGAGESGSDICNEIADEAAKVAIVVRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGYANQLAKKFVAKYGSDPSKEADERRVLQKIGELNIEQGTSAFSKFGCKNEGFVTAMVTKSAELHRDGFKL 786          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: UPI001881D0B9 (NAD(P)-binding domain-containing protein n=2 Tax=Planktothrix TaxID=54304 RepID=UPI001881D0B9)

HSP 1 Score: 84.7 bits (208), Expect = 1.630e-16
Identity = 51/126 (40.48%), Postives = 82/126 (65.08%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPYVLGDWVGFVNQLAKRFV-ASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGT 375
            +RVL+VG GESGSDI  +I++ A +T ++ R   G++IPR   +G+ TD++++RC ++ P  + +   F  +L  R + A MGP D++  VL + AE+N  +  SAF +F  KN+ FVEA++  GT
Sbjct:  202 RRVLIVGLGESGSDIALQIAQVAQATAVSTRRGPGYVIPRYY-NGQPTDVDSSRCYHAIPLPVMESSLF--KLNLRLIDAYMGP-DDDPKVLHRAAEINAARGLSAFRRFSTKNSAFVEALIHHGT 323          
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Match: A0A6J4M0C6_9BACT (Uncharacterized protein n=1 Tax=uncultured Gemmatimonadetes bacterium TaxID=203437 RepID=A0A6J4M0C6_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 4.360e-14
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    1 KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDLNTNRCRYSNPY-VLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLGQNTSAFSKFGCKNAGFVEAMVLRGTN 378
            KRVLVVG GESGSDI    ++ A  + ++ R   G++IPR    G  +DL+TNRC +S P  V+G    FV    +   A      ++A VL+K AE+N  +  S F +FG K+  F+EAMV  G +
Sbjct:  183 KRVLVVGVGESGSDIALMAARAAEESAISTRNGPGYVIPRYYR-GMPSDLDTNRCYHSLPRSVVGK--PFVRFKVRIEDALQNDGADQA-VLRKAAEINRARGVSPFHRFGTKSTAFIEAMVYHGAS 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68277.16433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG3_ECTSI8.780e-8395.52Flavin-binding monooxygenase-like subfamily n=2 Ta... [more]
A0A6V2ZPT4_HETAK1.460e-6373.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UXY2_9STRA3.530e-6173.68Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A8J2SBC1_9STRA1.790e-5972.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0TC76_9STRA1.860e-5971.01Hypothetical protein (Fragment) n=1 Tax=Chrysocyst... [more]
A0A7S2HPS1_9STRA5.570e-5871.01Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836C7U5_9STRA2.540e-5770.90Flavin-binding monooxygenase-like subfamily n=1 Ta... [more]
F0XYZ2_AURAN9.270e-5771.01SET domain-containing protein n=1 Tax=Aureococcus ... [more]
UPI001881D0B91.630e-1640.48NAD(P)-binding domain-containing protein n=2 Tax=P... [more]
A0A6J4M0C6_9BACT4.360e-1440.94Uncharacterized protein n=1 Tax=uncultured Gemmati... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68277contigM-pyrifera_M_contig68277:140..1240 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.8
Seed ortholog evalue3.6e-67
Seed eggNOG ortholog2880.D7FNG3
KEGG rclassRC02233
KEGG koko:K00485
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,map00982,map01120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N,N-dimethylaniline monooxygenase activity
EggNOG OGsCOG2072@1,KOG1399@2759
EC1.14.13.8
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size402
Cds size402
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816573.5325873-CDS-M-pyrifera_M_contig68277:139..3221622816573.5325873-CDS-M-pyrifera_M_contig68277:139..322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68277 140..322 -
1692278054.6645083-CDS-M-pyrifera_M_contig68277:139..3221692278054.6645083-CDS-M-pyrifera_M_contig68277:139..322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68277 140..322 -
1622816573.5448415-CDS-M-pyrifera_M_contig68277:1021..12401622816573.5448415-CDS-M-pyrifera_M_contig68277:1021..1240Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68277 1022..1240 -
1692278054.6814663-CDS-M-pyrifera_M_contig68277:1021..12401692278054.6814663-CDS-M-pyrifera_M_contig68277:1021..1240Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68277 1022..1240 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68277.16433.1prot_M-pyrifera_M_contig68277.16433.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68277 140..1240 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68277.16433.1

>prot_M-pyrifera_M_contig68277.16433.1 ID=prot_M-pyrifera_M_contig68277.16433.1|Name=mRNA_M-pyrifera_M_contig68277.16433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
KRVLVVGSGESGSDICNEISKYATSTGLAIRGKHGHLIPRKQADGRVTDL
NTNRCRYSNPYVLGDWVGFVNQLAKRFVASMGPADEEAMVLKKIAELNLG
QNTSAFSKFGCKNAGFVEAMVLRGTNLHRGGFEL
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mRNA from alignment at M-pyrifera_M_contig68277:140..1240-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68277.16433.1 ID=mRNA_M-pyrifera_M_contig68277.16433.1|Name=mRNA_M-pyrifera_M_contig68277.16433.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1101bp|location=Sequence derived from alignment at M-pyrifera_M_contig68277:140..1240- (Macrocystis pyrifera P11B4 male)
AAGCGCGTTCTGGTGGTGGGGTCCGGGGAGTCGGGGTCTGACATCTGTAA CGAGATCAGCAAGTACGCTACGTCCACGGGGCTGGCCATCCGCGGCAAGC ACGGACACCTCATCCCGCGAAAGCAGGCGGACGGGCGCGTGACGGACCTG AACACCAACCGCTGCCGCTACTCGAACCCGTACGTCCTCGGCGACTGGGT CGGCTTCGTCAATCAGTTGGTGAGTTTTTGTACAAAAAGTTTGTGGAGGC TTTTTTTTTTTGCCTTTGCCTTTGCTGCTTTCCGATGTTGGTCGTTTGTT CGTGTTGTTTTTGTTGAAGGCCCTTGCAGCTTGCAACTGCTTTCCTGTTG CCGTGCAGTGCATACCTTGCAGGCAGCAACAGCTTGAGGGATCCTCTCTG GTGTCTCCAAACAGATGAGTTGTTTTTAGGAGCGGTGTGGCTTGGTGACG TTCTCAACTAGCTTGCCGGGCTTGAACGGCAGCGCCGCGTCTTGGGACGC GTATACTACCAATACCTCGTGCAATGTTTCGTCAGTTTTCTGAGAAGGAC TTCGGCCATGACAAGACAGGACGGCGAGGCAAAGGTCCTTCGCAAAACGC CTCCATCCCCGAGAAAAAAAAAGAAGAAATCTATTGAACTGTTTTTAGGG GTCATGTTTGCTCTGCTCTACATACTCGTTCACAGCTGCCAACCTACGTG GTATGATATGATGACTTTTTGTGTATGTCTCATCGCCTTCCGCTGTGAGG AAAGGGCTATCTGCTTGCTGGGTCACAACGCCCTGGCCTTCTCTTGTCCT TTATTCGCCGTGCTGCGATGTTGCTGTTGCTCATAGATAGATAACAAACA TGCCGCCGTCTCTCTCTATCGCGCACGAATACAATATTTTGTTGTTGTCG AAACACACAACCAATCAGGCGAAGCGCTTCGTGGCGTCGATGGGACCTGC GGACGAGGAGGCGATGGTGCTGAAGAAGATCGCTGAGCTCAACCTTGGAC AGAACACCTCCGCCTTCAGCAAGTTTGGCTGCAAGAACGCGGGCTTCGTG GAGGCGATGGTACTCCGAGGCACGAACCTGCACAGGGGAGGCTTCGAGCT C
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68277:140..1240-

>mRNA_M-pyrifera_M_contig68277.16433.1 ID=mRNA_M-pyrifera_M_contig68277.16433.1|Name=mRNA_M-pyrifera_M_contig68277.16433.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig68277:140..1240- (Macrocystis pyrifera P11B4 male)
AAGCGCGTTCTGGTGGTGGGGTCCGGGGAGTCGGGGTCTGACATCTGTAA
CGAGATCAGCAAGTACGCTACGTCCACGGGGCTGGCCATCCGCGGCAAGC
ACGGACACCTCATCCCGCGAAAGCAGGCGGACGGGCGCGTGACGGACCTG
AACACCAACCGCTGCCGCTACTCGAACCCGTACGTCCTCGGCGACTGGGT
CGGCTTCGTCAATCAGTTGAAGCGCGTTCTGGTGGTGGGGTCCGGGGAGT
CGGGGTCTGACATCTGTAACGAGATCAGCAAGTACGCTACGTCCACGGGG
CTGGCCATCCGCGGCAAGCACGGACACCTCATCCCGCGAAAGCAGGCGGA
CGGGCGCGTGACGGACCTGAACACCAACCGCTGCCGCTACTCGAACCCGT
ACGTCCTCGGCGACTGGGTCGGCTTCGTCAATCAGTTGGCGAAGCGCTTC
GTGGCGTCGATGGGACCTGCGGACGAGGAGGCGATGGTGCTGAAGAAGAT
CGCTGAGCTCAACCTTGGACAGAACACCTCCGCCTTCAGCAAGTTTGGCT
GCAAGAACGCGGGCTTCGTGGAGGCGATGGTACTCCGAGGCACGAACCTG
CACAGGGGAGGCTTCGAGCTCGCGAAGCGCTTCGTGGCGTCGATGGGACC
TGCGGACGAGGAGGCGATGGTGCTGAAGAAGATCGCTGAGCTCAACCTTG
GACAGAACACCTCCGCCTTCAGCAAGTTTGGCTGCAAGAACGCGGGCTTC
GTGGAGGCGATGGTACTCCGAGGCACGAACCTGCACAGGGGAGGCTTCGA
GCTC
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