mRNA_M-pyrifera_M_contig68222.16430.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68222.16430.1
Unique NamemRNA_M-pyrifera_M_contig68222.16430.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0A812URZ1_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812URZ1_9DINO)

HSP 1 Score: 114 bits (285), Expect = 9.730e-29
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 1
Query:   70 KGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQVL 333
            KG I +DA LK +LDFQLR H+KFL+RFR+VFR  D D NG+VNEVEFR++V      KSDA V +LLA  DP++N+HITFS+CV VL
Sbjct:  187 KGRIAYDALLKILLDFQLRGHEKFLARFRKVFRAADTDGNGVVNEVEFRKVVKEAVQGKSDAEVDELLAAVDPYNNNHITFSDCVGVL 274          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0A5A8C7L3_CAFRO (EF-hand domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7L3_CAFRO)

HSP 1 Score: 103 bits (257), Expect = 1.830e-23
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 1
Query:   70 KGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQVL 333
            KG +N+ + LK +LDFQLR H K+L +FRRVF  VD D NG+V+E EFRRLV  +D SK+DA +  L+A  DP  + HITFS+CV+ L
Sbjct:  752 KGAVNYGSLLKTMLDFQLRGHQKYLEKFRRVFSHVDADGNGVVDEPEFRRLVKGIDSSKNDAQIDSLVALVDPFGHGHITFSDCVESL 839          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0A0S4J4H6_BODSA (Calcium-binding protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J4H6_BODSA)

HSP 1 Score: 100 bits (249), Expect = 2.160e-22
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 1
Query:    1 EAQGRRVRKTADERAR-EVAQESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQVL 333
            +AQ RR R+TA    R + A+E +  +++++ F++ +LDFQL  H++FLSRF RVF+  D D NGIVNE EFR ++  +DP+KS+  VS LL   DP++N  I FSECV  L
Sbjct:  557 QAQPRRTRRTAVPTTRSQAAKEEEPVLLSYNEFIRILLDFQLEGHERFLSRFVRVFKQHDTDRNGIVNEQEFRAILRSVDPAKSEEDVSALLDLIDPNNNQLINFSECVTFL 668          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: G0QSV4_ICHMG (EF-hand domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QSV4_ICHMG)

HSP 1 Score: 89.0 bits (219), Expect = 1.170e-18
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   58 QESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECV 324
            QE +K  I F  F K ILDFQL++H+KFL +F +++R VD D NGI+NE EFR L+  +   K +  +  +L+Q D ++   ITFS+CV
Sbjct:  256 QEKEKARIEFTVFQKIILDFQLKSHEKFLRKFIQLYRSVDQDQNGIINENEFRDLLIKMGIEKDETEIQKMLSQVDAYNKQQITFSQCV 344          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0A7S3KLG1_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KLG1_EUPCR)

HSP 1 Score: 84.0 bits (206), Expect = 8.350e-18
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1
Query:   79 INFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQV 330
            + F  F K ILDFQLR H+KFL +F  VF+ +D+D+NG++NE EFR LV  +D    +  V+ LL   DP +N  +TFSE V +
Sbjct:   74 LRFTDFQKIILDFQLREHEKFLEKFIDVFKSIDSDNNGVINESEFRELVQSMDVISDEEEVNYLLQMIDPFNNQQMTFSELVHL 157          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0CQK7_PARTE (EF-hand domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CQK7_PARTE)

HSP 1 Score: 87.4 bits (215), Expect = 8.420e-18
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   49 EVAQESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQV 330
            ++  E  K  I F  F K ILDFQ+++H+K+LS+F   F+  D D NGI++E EFR+L+A L+   +D  +   L + DP++N  ITFS+CVQ+
Sbjct:  570 QIVNEKDKSKIEFSIFQKVILDFQMKSHEKYLSKFILHFKQQDQDQNGIIDENEFRQLIADLNMGTNDFDIQRYLNKIDPYNNQQITFSQCVQL 663          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: D2VN60_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VN60_NAEGR)

HSP 1 Score: 87.0 bits (214), Expect = 1.150e-17
Identity = 37/85 (43.53%), Postives = 62/85 (72.94%), Query Frame = 1
Query:   79 INFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQVL 333
            + F  FLK +L +QL+ H++FL +F ++FR VD D NGI++E+EF+ L+ +++P++S++  +  L   DP++N HITF+ECV  L
Sbjct:  583 VPFKIFLKVLLTYQLKGHEQFLYKFVKLFRKVDGDKNGILSEIEFKHLLHLINPNRSESDYAQWLNYVDPYNNQHITFTECVTFL 667          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: J9EEH4_9SPIT (EF-hand domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9EEH4_9SPIT)

HSP 1 Score: 85.5 bits (210), Expect = 4.120e-17
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:   34 DERAREVAQESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECVQVL 333
            DE  R+     Q   + +  FLK ILDFQL  H+KFLS F ++F+ VD+DSNGI++E EFR L+  +   ++   V  LL+  DPH+N  +T+SE VQ+L
Sbjct:  950 DEEIRQRKHVKQVSKLLYTEFLKIILDFQLLEHEKFLSCFTQIFKQVDSDSNGIIDENEFRDLIIKMGVVQTMDEVEQLLSIVDPHNNKQMTYSEIVQLL 1049          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: C0NA18_TETTS (EF hand protein, putative n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=C0NA18_TETTS)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-16
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   19 VRKTADERAREVAQESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECV 324
             +K   E+   + QE +K  I +  F K ILDFQL++H+KFL +F  +FR VD D NG+++E +F+ L+  +D  K D  +   L+  DP +   ITFS+CV
Sbjct:  556 TKKVTREQLLAMQQEKEKFKIEYVIFQKIILDFQLKSHEKFLKKFILLFRSVDKDLNGVIDEEQFKELIDKMDVKKDDTEIQRYLSILDPFNKQQITFSQCV 657          
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Match: A0A1R2AZN7_9CILI (EF-hand domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AZN7_9CILI)

HSP 1 Score: 84.3 bits (207), Expect = 1.020e-16
Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 1
Query:   58 QESQKGMINFDAFLKCILDFQLRTHDKFLSRFRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHNDHITFSECV 324
            +++ K  I F  F+K +LDFQL+ H+KFL++F ++FR VD D++GI+NE EFR LV  +D   S+  +  LL   DP+ N  ITFSE V
Sbjct:  603 EKAMKNRILFSDFIKVLLDFQLKGHEKFLNKFTQIFRKVDTDADGIINEQEFRDLVVFMDLGFSEDDIIRLLQIIDPYDNQQITFSEGV 691          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68222.16430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812URZ1_9DINO9.730e-2962.50Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=2309... [more]
A0A5A8C7L3_CAFRO1.830e-2355.68EF-hand domain-containing protein n=4 Tax=Cafeteri... [more]
A0A0S4J4H6_BODSA2.160e-2248.21Calcium-binding protein, putative n=1 Tax=Bodo sal... [more]
G0QSV4_ICHMG1.170e-1846.07EF-hand domain-containing protein n=1 Tax=Ichthyop... [more]
A0A7S3KLG1_EUPCR8.350e-1847.62Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0CQK7_PARTE8.420e-1843.62EF-hand domain-containing protein n=1 Tax=Parameci... [more]
D2VN60_NAEGR1.150e-1743.53Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
J9EEH4_9SPIT4.120e-1745.00EF-hand domain-containing protein n=1 Tax=Oxytrich... [more]
C0NA18_TETTS1.010e-1640.20EF hand protein, putative n=1 Tax=Tetrahymena ther... [more]
A0A1R2AZN7_9CILI1.020e-1647.19EF-hand domain-containing protein n=2 Tax=Stentor ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68222contigM-pyrifera_M_contig68222:15..347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue5.3e-16
Seed eggNOG ortholog5932.XP_004035207.1
Hectar predicted targeting categoryother localisation
EggNOG OGs28P70@1,2QVTY@2759,3ZB7T@5878
Best tax levelCiliophora
Best eggNOG OGNA|NA|NA
Exons1
Model size333
Cds size333
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816573.2353513-CDS-M-pyrifera_M_contig68222:14..3471622816573.2353513-CDS-M-pyrifera_M_contig68222:14..347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68222 15..347 +
1692278054.4882188-CDS-M-pyrifera_M_contig68222:14..3471692278054.4882188-CDS-M-pyrifera_M_contig68222:14..347Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68222 15..347 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68222.16430.1prot_M-pyrifera_M_contig68222.16430.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68222 15..347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68222.16430.1

>prot_M-pyrifera_M_contig68222.16430.1 ID=prot_M-pyrifera_M_contig68222.16430.1|Name=mRNA_M-pyrifera_M_contig68222.16430.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
EAQGRRVRKTADERAREVAQESQKGMINFDAFLKCILDFQLRTHDKFLSR
FRRVFRDVDNDSNGIVNEVEFRRLVAMLDPSKSDAAVSDLLAQADPHHND
HITFSECVQVL
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mRNA from alignment at M-pyrifera_M_contig68222:15..347+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68222.16430.1 ID=mRNA_M-pyrifera_M_contig68222.16430.1|Name=mRNA_M-pyrifera_M_contig68222.16430.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=333bp|location=Sequence derived from alignment at M-pyrifera_M_contig68222:15..347+ (Macrocystis pyrifera P11B4 male)
GAGGCCCAAGGGAGGCGCGTGAGAAAGACTGCTGATGAGAGAGCAAGGGA AGTTGCGCAAGAGTCTCAAAAAGGCATGATCAATTTCGATGCCTTCCTCA AGTGTATCCTTGATTTCCAACTTCGTACTCACGACAAGTTTCTTTCTCGA TTCAGGAGAGTCTTCCGAGATGTCGACAATGATTCCAACGGCATTGTAAA CGAAGTTGAATTCAGGAGACTTGTTGCTATGCTTGATCCCTCGAAATCTG ATGCTGCCGTCTCAGATCTTCTTGCACAAGCTGATCCTCATCATAATGAT CACATTACTTTCTCAGAATGTGTCCAAGTACTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68222:15..347+

>mRNA_M-pyrifera_M_contig68222.16430.1 ID=mRNA_M-pyrifera_M_contig68222.16430.1|Name=mRNA_M-pyrifera_M_contig68222.16430.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig68222:15..347+ (Macrocystis pyrifera P11B4 male)
GAGGCCCAAGGGAGGCGCGTGAGAAAGACTGCTGATGAGAGAGCAAGGGA
AGTTGCGCAAGAGTCTCAAAAAGGCATGATCAATTTCGATGCCTTCCTCA
AGTGTATCCTTGATTTCCAACTTCGTACTCACGACAAGTTTCTTTCTCGA
TTCAGGAGAGTCTTCCGAGATGTCGACAATGATTCCAACGGCATTGTAAA
CGAAGTTGAATTCAGGAGACTTGTTGCTATGCTTGATCCCTCGAAATCTG
ATGCTGCCGTCTCAGATCTTCTTGCACAAGCTGATCCTCATCATAATGAT
CACATTACTTTCTCAGAATGTGTCCAAGTACTCGAGGCCCAAGGGAGGCG
CGTGAGAAAGACTGCTGATGAGAGAGCAAGGGAAGTTGCGCAAGAGTCTC
AAAAAGGCATGATCAATTTCGATGCCTTCCTCAAGTGTATCCTTGATTTC
CAACTTCGTACTCACGACAAGTTTCTTTCTCGATTCAGGAGAGTCTTCCG
AGATGTCGACAATGATTCCAACGGCATTGTAAACGAAGTTGAATTCAGGA
GACTTGTTGCTATGCTTGATCCCTCGAAATCTGATGCTGCCGTCTCAGAT
CTTCTTGCACAAGCTGATCCTCATCATAATGATCACATTACTTTCTCAGA
ATGTGTCCAAGTACTC
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