mRNA_M-pyrifera_M_contig6822.16428.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.680e-50 Identity = 140/207 (67.63%), Postives = 152/207 (73.43%), Query Frame = 1
Query: 22 SDNNPKLVHVSYDQAKGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEAMTKLKSAMEQGQKDCEERTXXXXXXXXXXXXXXXXXXXXXXXDGATGAKKDKTDAAATKGASXXXXXXXXXXXXXXXXXXXXXXEGDAAEEFVYIPEADQAASGGDGGAPAAYKNDGSFLEKVQKELE 642
SDNNPKLVHVSYDQAKGKD EG KAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDE + EA KL A+E+G+ +CEERT XXXXXXXXXXXXXXXXXXXX TGA + XXXXXXXXXXXX +EFVYIPEAD A +GGDGG+ +KNDGSFLE ++KELE
Sbjct: 11 SDNNPKLVHVSYDQAKGKDNDEG----KAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNECEERTRKKXXXXXXXXXXXXXXXXXXXXQAKTGAXXXXXPSXXXXXXXXXXXXXXXXXXXE--------------DEFVYIPEADLATAGGDGGS--GFKNDGSFLEMMKKELE 197
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.280e-15 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYDQAKGKD-APEGEGGG----KAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEAMTKLKSAMEQGQKDCEERT 315
T +DNNPK+V VSY QA G+D A + GG + GK+ V K D VMGS AGAGSG+FH+YRA R RE+ R+ A++ ++++ + + + ++Q ++ CEERT
Sbjct: 9 TYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCEERT 113
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 8.300e-15 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 22 SDNNPKLVHVSYDQAKGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEAMTKLKSAME 285
SD+NPK+ VSY+QA GE A G+L +K D VMGS AGAGSGEFH YRA RRRE+HR+AA++ A K +E L++ +E
Sbjct: 11 SDSNPKVAKVSYEQA----TQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIE 94
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL) HSP 1 Score: 68.9 bits (167), Expect = 7.570e-11 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYD-QAKGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEA 258
T SD + + V+YD + KD+ + K GGKLVV + D V GS AGAGSGEFHTYRA RRREM R+A+M++ K+ +A
Sbjct: 9 TFSDQDAQGAAVAYDADSNAKDSSDAASNVK-GGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKA 89
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.750e-10 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYDQA-KGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEAMTKLKS 276
T SD + + V+YD A K + + G GK V + D V GS AGAGSG+FHTYRA RRREM RVAAM++ K+ +A + ++
Sbjct: 9 TFSDQDAQGAAVTYDAASKDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKAQQEFEA 96
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A484DQI6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQI6_BRELC) HSP 1 Score: 65.1 bits (157), Expect = 1.900e-9 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYDQAKGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEA 258
T SD + ++ V+YD + P G GKL V + D V GS AGAGSGEFH+YRA RRREM RVA M++ +++A
Sbjct: 9 TFSDQDAQVATVAYDATVKEKEPSGTTSEIKDGKLHVNRVDNVSGSSAGAGSGEFHSYRAARRREMERVAVMEKRYNDKKA 89
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: G4YMD8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMD8_PHYSP) HSP 1 Score: 63.5 bits (153), Expect = 9.930e-9 Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYDQAKGKDAPEGEGGG--KAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEA 258
T SD + K V+Y+ A A +G K KL + + D V GS AGAGSG+FHTYRA RRREM RV AM++ KE +A
Sbjct: 9 TFSDQDAKGAAVAYNAASEPAAAPADGANESKDSSKLHINRVDNVSGSSAGAGSGDFHTYRAARRREMERVEAMEQRYKENKA 91
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: D0N079_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N079_PHYIT) HSP 1 Score: 63.2 bits (152), Expect = 9.950e-9 Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 16 TDSDNNPKLVHVSYDQAKGKDAPEGEGGGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKE 249
T SD + + V+YD GKL V + + V GS AGAGSG+FHTYRA RRREM RVAAM++ KE
Sbjct: 9 TFSDQDAQGAAVAYDATSSAATTSATSSDTKDGKLHVNRVENVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKE 86
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: H3HBP6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBP6_PHYRM) HSP 1 Score: 60.8 bits (146), Expect = 6.420e-8 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 112 GKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKEEEAMTKLKS 276
G+L + + + V GS AGAGSGEFHTYRA RRREM RVA M++ K+ +A + ++
Sbjct: 42 GRLQINRVENVAGSTAGAGSGEFHTYRASRRREMERVALMEQRYKDSKAQQEFET 96
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Match: A0A329S4L5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S4L5_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 9.170e-8 Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 118 LVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEAMKE 249
L V + D V GS AGAGSG+FHTYRA RRREM RVAAM++ KE
Sbjct: 41 LNVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKE 84 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6822.16428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6822.16428.1 >prot_M-pyrifera_M_contig6822.16428.1 ID=prot_M-pyrifera_M_contig6822.16428.1|Name=mRNA_M-pyrifera_M_contig6822.16428.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=239bp MSLRKTDSDNNPKLVHVSYDQAKGKDAPEGEGGGKAGGKLVVEKTDQVMGback to top mRNA from alignment at M-pyrifera_M_contig6822:6293..8467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6822.16428.1 ID=mRNA_M-pyrifera_M_contig6822.16428.1|Name=mRNA_M-pyrifera_M_contig6822.16428.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2175bp|location=Sequence derived from alignment at M-pyrifera_M_contig6822:6293..8467- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6822:6293..8467- >mRNA_M-pyrifera_M_contig6822.16428.1 ID=mRNA_M-pyrifera_M_contig6822.16428.1|Name=mRNA_M-pyrifera_M_contig6822.16428.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1434bp|location=Sequence derived from alignment at M-pyrifera_M_contig6822:6293..8467- (Macrocystis pyrifera P11B4 male)back to top |