mRNA_M-pyrifera_M_contig68218.16425.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A3B4BF22_9GOBI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BF22_9GOBI) HSP 1 Score: 343 bits (879), Expect = 4.150e-118 Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 1
Query: 1 MFLLYEYDFFWAFLIVSSVIPILAFLISGVLAPISKGPEKLSIMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MFLLYEYD FWAFLI+SSVIPILAFLISGVLAPISKGPEKLSIMNSIIEFP LDRT QNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFLISGVLAPISKGPEKLSIMNSIIEFPFLDRTIQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 180
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A7N5KPQ9_AILME (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=A0A7N5KPQ9_AILME) HSP 1 Score: 326 bits (836), Expect = 2.310e-111 Identity = 171/185 (92.43%), Postives = 176/185 (95.14%), Query Frame = 1
Query: 1 MFLLYEYDFFWAFLIVSSVIPILAFLISGVLAPISKGPEKLS-----IMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MFLLYEYD FWAFLI+SS+IPILAFLISG+LAPISKGPEKLS IMNSI EFPLLD+TTQNSVISTT +D SNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MFLLYEYDIFWAFLIISSLIPILAFLISGILAPISKGPEKLSRNIETIMNSI-EFPLLDQTTQNSVISTTLNDFSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 184
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A6N2LBL0_SALVM (NADH-ubiquinone oxidoreductase chain 3 (Fragment) n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6N2LBL0_SALVM) HSP 1 Score: 297 bits (760), Expect = 1.560e-98 Identity = 171/255 (67.06%), Postives = 175/255 (68.63%), Query Frame = 1
Query: 1 MFLLYEYDFFWAFLIVSSVIPILAFLISGVLAPISKGPEKLS---------------------------------------------------------------------------IMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MFLLYEYD FWAFLI+SSVIPILAFLISG+LAPI KGPEKLS +MNSI EFPLLDRTT SVISTTS+DLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MFLLYEYDIFWAFLIISSVIPILAFLISGLLAPIRKGPEKLSSYESGIEPMAMLGYNFESVIIFFVVFDVETVFLYPWAMSFDVLGLCMAKRSIRMVLALEYSDNNNENKKKKNIETVMNSI-EFPLLDRTTPISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 254
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A7L8HZ13_HIPRU (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=2 Tax=Hippeastrum rutilum TaxID=214526 RepID=A0A7L8HZ13_HIPRU) HSP 1 Score: 283 bits (724), Expect = 1.260e-92 Identity = 166/279 (59.50%), Postives = 175/279 (62.72%), Query Frame = 1
Query: 1 MFLLYEYDFFWAFLIVSSVIPILAFLISGVLAPISKGPEKLS---------------------------------------------------------------------------------------------------IMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MFLL+EYD FWAFLI+S IPILAF+ISGVLAPIS+GPEKLS +MN +I+FPLLD+TT NSVISTTS+DLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MFLLHEYDIFWAFLIISGAIPILAFVISGVLAPISEGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALFNFRAYPNCWFSLCMAKRSIGMVLAEYSENQKKKKEGKDSIETVMN-LIDFPLLDQTTPNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 278
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A6B7L076_9ROSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=185 Tax=Rosales TaxID=3744 RepID=A0A6B7L076_9ROSA) HSP 1 Score: 275 bits (704), Expect = 1.750e-91 Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1
Query: 124 SIMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
++MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 13 TVMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 151
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: NDHK_MORIN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=140 Tax=Magnoliopsida TaxID=3398 RepID=NDHK_MORIN) HSP 1 Score: 274 bits (700), Expect = 4.440e-91 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 130 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 137
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A649Z769_9ROSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=9 Tax=Amygdaloideae TaxID=171637 RepID=A0A649Z769_9ROSA) HSP 1 Score: 274 bits (700), Expect = 4.440e-91 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 130 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 137
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A7L8XHC2_9ROSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=9 Tax=Rosoideae TaxID=171638 RepID=A0A7L8XHC2_9ROSA) HSP 1 Score: 274 bits (700), Expect = 4.440e-91 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 130 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 137
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A482CEH5_9ROSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=2 Tax=Rosales TaxID=3744 RepID=A0A482CEH5_9ROSA) HSP 1 Score: 274 bits (700), Expect = 4.600e-91 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 130 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 1 MNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 137
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Match: A0A1L5YDR7_9ROSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic n=144 Tax=Pentapetalae TaxID=1437201 RepID=A0A1L5YDR7_9ROSA) HSP 1 Score: 274 bits (700), Expect = 5.090e-91 Identity = 136/139 (97.84%), Postives = 139/139 (100.00%), Query Frame = 1
Query: 124 SIMNSIIEFPLLDRTTQNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 540
++MNSIIEFPLLDRTT+NSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL
Sbjct: 3 TVMNSIIEFPLLDRTTKNSVISTTSSDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYL 141 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68218.16425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68218.16425.1 >prot_M-pyrifera_M_contig68218.16425.1 ID=prot_M-pyrifera_M_contig68218.16425.1|Name=mRNA_M-pyrifera_M_contig68218.16425.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp MFLLYEYDFFWAFLIVSSVIPILAFLISGVLAPISKGPEKLSIMNSIIEFback to top mRNA from alignment at M-pyrifera_M_contig68218:413..1241+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68218.16425.1 ID=mRNA_M-pyrifera_M_contig68218.16425.1|Name=mRNA_M-pyrifera_M_contig68218.16425.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=829bp|location=Sequence derived from alignment at M-pyrifera_M_contig68218:413..1241+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68218:413..1241+ >mRNA_M-pyrifera_M_contig68218.16425.1 ID=mRNA_M-pyrifera_M_contig68218.16425.1|Name=mRNA_M-pyrifera_M_contig68218.16425.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig68218:413..1241+ (Macrocystis pyrifera P11B4 male)back to top |