mRNA_M-pyrifera_M_contig682.16424.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig682.16424.1 vs. uniprot
Match: D7FXB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB2_ECTSI) HSP 1 Score: 362 bits (928), Expect = 7.500e-105 Identity = 316/755 (41.85%), Postives = 404/755 (53.51%), Query Frame = 1
Query: 1378 GDGKYPEKYRFGILLGMLTIATMVDADGVVAENRATSVTGGPGRKNGDSVGRTGKSSKIYRDKEGTAEGGGERXXXXXXXXXG-RGVIAVLDDGHEMDQCSCDLVKASTKYLHERLLVVLVSPPLPTTITPHR-TGGIYNISSGSR---GGPLECPCLEKDDEDS--AYGSGSEACSSASTDVGDSESVVFLTSLVYTMKEPHQIEAAARASDXXXXXPTNTTNSKAGTNTSTIITPHEPKLWTAREGRNSSARRRNERVSQPNLGRESSVAKRSTRRRKTTASGSNRDYGVEGRGRTSGGSGGDSSDCDGTGKVGAIPHHLQIGAAAFMEAGNATIGENAK--LTEVSMHRHGRKDSGFTRYWNPGTIKLIDILVSLRDKISVETVCVRTLRYEETVQLGCRHLGCDELDPLVGVALFLRTNGNPLYVIGYCDLMLERNLGGVVQVTAS-QPSLSLEELPTSLPAQKSNSDRGYAAQVSPGFNLP-IDEGRHTVDGPQYEET--GGXXXXXXXXXXGGNVANG---GEHVIAPAGQTSTGTGATPERQEKKNGKQSPKS--PNRTLFRFQESVHVFKMLEGTIPSSVESRIIEFLSCLSAQQSFVLRVMSVIGTRGIESGLLEAVYPISVRGSTIWEDLHALEAFRLIEIEGVTPDLEVPMPGGVAPAASTXXXXXXXXXXXEPTSGPLPQTSRGTDEKRKKKNH--LTLSFRDLVVHQVVYKRLSHNHRRQLHSNIAEWLAERLKRSNRKLVR 3582
GDGK PEK RF +LLGMLTIATMVDA+G A + A G G+++ + G+ + +++ D +GG XXXXXXXXX RGV+AVLDDGHEMD SCDLVKASTKYLH+RLLVVLVSPPLP IT HR T G G R GG + E DEDS A SGSE S S D D +V +++++ + ++E+ D P + +S+ G ST ++ EP V K + R + T Y E RG S + DG G A G I N + S R D G + G K + L+ V VR+LRYEETVQLGCRHLGCDELDP+VGVAL+L+TNGNPL +IGYC+LM+ERNLG V T P+ S A S++ A +V G P +D + VD E + +VA G G AG + G ++ K+ Q+P++ P T+FRFQE+++VFK+LEGT+PSSVESRII FL CLSAQQSF+LRVMSVIGTR IE+ L+EAVYPI ++GST+ EDLHALEA RLI+I+ V + PG AA+ XX + GT+ R ++H LTLSFRDLV+HQVVYKRLSHNHR QLH +IA+WL+ R ++S + + R
Sbjct: 106 GDGK-PEKSRFSVLLGMLTIATMVDAEGKAAASWAAKSAAGRGQEDQEVDGQAERGARL--DSAENEDGGSVXXXXXXXXXXXVRGVVAVLDDGHEMDPYSCDLVKASTKYLHQRLLVVLVSPPLPGIITKHRHTSGSCASHGGGRSDSGGHVG----EHGDEDSSTACTSGSEDESVLSDDDPD-RTVTVVSNVLPILNAVGELESGGGGGDERNSMP-GSVDSEVGP-ASTGVSCSEP------------------------------VTKATAGRPELTPP-----YRAE-RGSRSSAAEHAGGKPDGAGXX------XXXXKKARKSGGELGIKRNGDKVMRRTSKRRSRTSDDG-----SGGAPKAPGSTLHLQ-------VLVRSLRYEETVQLGCRHLGCDELDPVVGVALYLQTNGNPLSIIGYCNLMVERNLGEVTLTTTGVTPTTS---------ANPSHTASAAAPKVGGGAQPPAVDANKDDVDISTAEPSIAAAAAVAAMLETAVESVAQGLEGGNRQGLLAGDNAAGD------EKGKHETQTPQNNVPPATIFRFQENMNVFKVLEGTVPSSVESRIIAFLGCLSAQQSFILRVMSVIGTRAIEAELVEAVYPIPIKGSTLREDLHALEACRLIKIDKVANETH---PGQSQAAAAAXXAETFAAG-----------SRTGTERTRHHRDHHKLTLSFRDLVIHQVVYKRLSHNHRNQLHGSIADWLSYRQQQSAKSVGR 767
BLAST of mRNA_M-pyrifera_M_contig682.16424.1 vs. uniprot
Match: A0A6H5K777_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K777_9PHAE) HSP 1 Score: 261 bits (666), Expect = 5.750e-75 Identity = 158/280 (56.43%), Postives = 188/280 (67.14%), Query Frame = 1
Query: 3043 VHVFKMLEGTIPSSVESRIIEFLSCLSAQQSFVLRVMSVIGTRGIESGLLEAVYPISVRGSTIWEDLHALEAFRLIEIEGVTPDLEVPMPGGVAPAASTXXXXXXXXXXXEPTSGPLPQTSRGTDEKRKKKNHLTLSFRDLVVHQVVYKRLSHNHRRQLHSNIAEWLAERLKRSNRK---LVRGVRRSTRRHGDVRAGSTTLKATTKGTRVTPALSVPFLVHHLTLAHKEQKAMIRAHLFGVRELEEWAMRAFATTLAKRAAGVPEELLGLVKQNKDFMW 3873
++VFK+LEGT+PSSVESRII FLSCLSAQQSF+LRVMSVIG RGIE+ L+EAVYPI ++GST+ EDL+ALEA RLI+I+ V + P S XXXXXX S +T R + + LTLSFRDLV+HQVVYKRLSHNHR QLH +IA+WL+ R ++S + V R RR G G KA G V P P +VHHLTLAH EQKAMIRAH+FGV+ELE+WAM FA L K A GVPE+LL L K K+FMW
Sbjct: 1 MNVFKVLEGTVPSSVESRIIAFLSCLSAQQSFILRVMSVIGIRGIEAELVEAVYPIPIKGSTLREDLYALEACRLIKIDKVANETH--------PGQSQAAXXXXXXEMFAAGS----RTERERTRHHRDHHKLTLSFRDLVIHQVVYKRLSHNHRNQLHGSIADWLSHRQQQSAKSEELTVGDTRGGARRRGSFEGG----KAVAMGETVAPTQFTPMIVHHLTLAHHEQKAMIRAHIFGVKELEQWAMGTFAVILEKHAVGVPEDLLRLAKGCKEFMW 264
BLAST of mRNA_M-pyrifera_M_contig682.16424.1 vs. uniprot
Match: A0A835YQ74_9STRA (Guanylate cyclase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ74_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.070e-45 Identity = 126/313 (40.26%), Postives = 173/313 (55.27%), Query Frame = 1
Query: 3040 SVHVFKMLEGTIPSSVESRIIEFLSCLSAQQSFVLRVMSVIGTRGIESGLLEAVYPISV-RGSTIWEDLHALEAFRLIEI-EGVTPDLEVPMPGGVAPAASTXXXXXXXXXXXEPTSGPLPQTSRGTDEKRKKKNHLTLSFRDLVVHQVVYKRLSHNHRRQLHSNIAEWLAERLKRSNRKLVRGVRRSTRRHGDVRAGSTTLKATTKGT-RVTPALSVPFLVHHLTLAHKEQKAMIRAHLFGVRELEEWAMRAFATTLAKRAAGVPEELLGLVKQNKDFMWLCANLIGVLKTLLAIRSGGGVSKATSKFRKTV 3969
S +V ++L+G +PS+VE+++++FL CL+AQQ FVL+V+S +G I +LE VYPI V G + D+ ALEA +++ + EG GG AA+ +T+SFRDLV+HQVVY++LSH HRR LH+ +AE+ ++ K++ GD G +G+ RV A P LVHHLTLAH+EQKAMIRAH+ GVRELE WA++ F L +P L + N+D MWL ++G+LKTL AIRSG GVS AT KFR V
Sbjct: 1518 SKNVCRVLQGAMPSAVETKVLDFLGCLTAQQLFVLKVLSAMGAYDISVAMLEEVYPIPVVPGCPLLADVLALEACKIVWVQEG----------GGNGGAAA-----------------------------------MTVSFRDLVLHQVVYQKLSHQHRRDLHARLAEYYLDQQKKAGAW-----------EGDADGGG-------RGSPRVASADITPLLVHHLTLAHREQKAMIRAHVIGVRELEAWAVKDFQKLLHACLPPLPAGARALARANRDLMWLSPAVVGILKTLAAIRSGQGVSSATRKFRSRV 1767
BLAST of mRNA_M-pyrifera_M_contig682.16424.1 vs. uniprot
Match: A0A835YQG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.420e-14 Identity = 95/358 (26.54%), Postives = 138/358 (38.55%), Query Frame = 1
Query: 3055 KMLEGTIPSSVESRIIEFLSCLSAQQSFVLR-----------------VMSVIGTRGIESGLLEAVYPISVRGSTIWEDLHALEAFRLIEIEGVTPDLEVPMPGGVAPAASTXXXXXXXXXXXEPTSGPLPQTSRGTDEKRKKKNHLTLSFRDLVVHQVVYKRLSHNHRRQ----LH---------------------------------------SNIAEWLAERLKRSNRKLVRGVRRST----RRHGDVRAGSTTLKATTKGTRVTPALSVPFLVHHLTLAHKEQKAMIRAHLFGVRELEEWAMRAFATTLAKRAA----GVPEELLGLVKQNKDFMWLCANLIGVLKTLLAIRS 3924
++L+G +P +VE+R++++L CL++QQ ++L+ V+SV+GT I LL +YP+ V + + D+ L A R + + S G R + L +SFRDL++HQVVY++LSH+HRR+ LH + E +AE R+ G S LVHHL LAHKEQKAMIRAH+ GV L W M + RA +PE + D +WL +L+GVL+TL AIRS
Sbjct: 359 RVLQGHVPPAVEARVLQYLGCLTSQQLYILKGYVTANKQRRVHGAHRQVLSVMGTYDISVALLHEIYPLPVTSTPLAADVTLLCAHRTLRS----------------------------------------RRSGGXXXXRGDGDTL-VSFRDLLLHQVVYEKLSHSHRRRSARLLHIYTRTHTSDRHATALNGRARAPACVCPXXXXXXXXXXXXXELHEKMAEHYALVQRRCASGDGASDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALLVHHLALAHKEQKAMIRAHMVGVAALRRWVMADLQRMV--RAVMPWLRLPEAVAQSATAWHDLLWLAPHLLGVLRTLAAIRS 673 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig682.16424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig682.16424.1 >prot_M-pyrifera_M_contig682.16424.1 ID=prot_M-pyrifera_M_contig682.16424.1|Name=mRNA_M-pyrifera_M_contig682.16424.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1332bp VCQGEPGVGKTLLVNECGREWQRERVQTLGLNRSYFQVNNGSPFSAWKRVback to top mRNA from alignment at M-pyrifera_M_contig682:240..27743+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig682.16424.1 ID=mRNA_M-pyrifera_M_contig682.16424.1|Name=mRNA_M-pyrifera_M_contig682.16424.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=27504bp|location=Sequence derived from alignment at M-pyrifera_M_contig682:240..27743+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig682:240..27743+ >mRNA_M-pyrifera_M_contig682.16424.1 ID=mRNA_M-pyrifera_M_contig682.16424.1|Name=mRNA_M-pyrifera_M_contig682.16424.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7992bp|location=Sequence derived from alignment at M-pyrifera_M_contig682:240..27743+ (Macrocystis pyrifera P11B4 male)back to top |