mRNA_M-pyrifera_M_contig6818.16421.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN5_ECTSI) HSP 1 Score: 147 bits (371), Expect = 9.260e-43 Identity = 74/136 (54.41%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 1 NSGLVHQLAMMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQNWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
+SG V L+ ++ ++MVS+C+ + ++K KFLEL +NMLA+TNL IC+NLALIVS + + +S + +E VGICM IVS LL FR+KEIKECW+ H RIR+YFGLTL GTAVNL LGICG++Y++ D++
Sbjct: 20 HSGAVLGLSYLTEDVMVSSCYAASNLLGLIKFIKFLELAAANMLAITNLGICINLALIVSEKYDLAILSIYVIELFVGICMFGIVSWLLTFRMKEIKECWEAHIRIRYYFGLTLFGTAVNLGLGICGVVYIIGDQQ 155
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.850e-42 Identity = 80/174 (45.98%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 46 MVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLR-----------------------------------------------------QNWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
M+S CWTG + ++KTFKFLEL NMLA+TNLAIC+NLAL+V +WIT+S+F+LEF VGICM VIV+ LLLFR+ EIKECWK+H RIR+YFGLTL+ T VNL LGICG+IY++ DR+
Sbjct: 5 MISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDRE 178
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.250e-41 Identity = 86/187 (45.99%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 4 SGLVHQLAMMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQ----------------------------------------------------NWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
SGL+HQL M+ MVS CW G + ++KT KF EL SNMLA+TNLAICVNLALIV + +WI V+ FF+EF VGICMLVIV L++FR EIK+ WK+H RIR+YFGLTL+ T VNLALGICG IYV+ D K
Sbjct: 85 SGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMK 271
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 144 bits (362), Expect = 1.020e-39 Identity = 79/173 (45.66%), Postives = 95/173 (54.91%), Query Frame = 1
Query: 46 MVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQ----------------------------------------------------NWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
MV CW G V VK KFLEL SNMLA+TNLAIC NLAL++ + +W+ VS+FFLEF VGICM VIV+ LLLFR+ E+KECWK+H RIR+YFGLTL+GT VNLALG+CG IYV+ R+
Sbjct: 1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGRE 173
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.040e-36 Identity = 84/231 (36.36%), Postives = 105/231 (45.45%), Query Frame = 1
Query: 7 GLVHQLAMMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQ-------------------------------------------------------------------------------------------------NWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
GL++QL ++ M+S CW G + ++KTFKFLEL NMLA TNLAIC+NLAL+V +WITVS+F+LEF VGICM VIV+ LLLFR+ EIKECWK H RIR+YFGLTL+ T VNL LGICG+IY++ DR+
Sbjct: 11 GLLYQLLILMQATMISVCWAGANLIKLIKTFKFLELASVNMLATTNLAICINLALVVMSESINNTSPSAPHGICSLLPLSGTSVCGLLSLVLPTVGDTAQLQSHGDQQPGVNSLSSPLLIMVSLVISIGAAAAAAPFWDFIILSGTGFFPETENQRGSDWITVSRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKTHARIRYYFGLTLIATGVNLILGICGVIYLIGDRE 241
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.050e-36 Identity = 74/173 (42.77%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 46 MVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQ----------------------------------------------------NWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
M+S CW G + N++K KFLEL +NMLAVTNLAICVNLAL+V + +W VS+F EF VGICM+ IV+ LLLFR+KEIKECWK+H RIR+YFGLTL+ T VNL LGI G +Y++ + +
Sbjct: 1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGEGQ 173
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.480e-35 Identity = 75/172 (43.60%), Postives = 91/172 (52.91%), Query Frame = 1
Query: 46 MVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVS----------------------------------------------------LRQNWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDR 405
M+S CW G +E +K K+LE T SNMLA+TNLAIC+NLAL+V+ + +WI VS LEF VGICM VIVS L+ FR++ IKECWKIH RIR+YF LTL+ TAVNLALGI G+ YV D
Sbjct: 1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 130 bits (326), Expect = 5.980e-35 Identity = 75/171 (43.86%), Postives = 92/171 (53.80%), Query Frame = 1
Query: 46 MVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQ----------------------------------------------------NWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSD 402
M+S CW G + +KT KFLEL SNMLA+TNLAICVNL+LIV R+ ++ +S F +EF VGICM VIVS LLLFR+ EIKECW +H +R+YFGLTL+GT NL LG+CG IYV+SD
Sbjct: 1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISD 171
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 130 bits (328), Expect = 8.610e-35 Identity = 76/187 (40.64%), Postives = 105/187 (56.15%), Query Frame = 1
Query: 4 SGLVHQLAMMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVSLRQN-----------------------------------------WIT-----------VSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
+G++ L + ++MV+ CW G +E+++KT KF+EL S+MLA+T+LAICVNLALIVS + WI VS FFLEF VG+CM VIV+ LLLFRLKE+KECW+IH RIR+Y LT++GT ++L++GIC ++VL K
Sbjct: 10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLK 196
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.210e-34 Identity = 78/188 (41.49%), Postives = 102/188 (54.26%), Query Frame = 1
Query: 1 NSGLVHQLAMMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVS----------------------------------------------------LRQNWITVSQFFLEFGVGICMLVIVSTLLLFRLKEIKECWKIHGRIRFYFGLTLVGTAVNLALGICGMIYVLSDRK 408
+SG + LA+M+ ++MVSAC+ + ++KT F+ +T SNMLA TNL IC+NLALIVS ++ ++I +S + +EF VGICMLVIV L +FR+ EIKECW+ H RIR+YF LTL GTAVNL LGICG YV DRK
Sbjct: 8 HSGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRK 195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6818.16421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6818.16421.1 >prot_M-pyrifera_M_contig6818.16421.1 ID=prot_M-pyrifera_M_contig6818.16421.1|Name=mRNA_M-pyrifera_M_contig6818.16421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp MMSLNLMVSACWTGIEVENVVKTFKFLELTGSNMLAVTNLAICVNLALIVback to top mRNA from alignment at M-pyrifera_M_contig6818:1449..5634+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6818.16421.1 ID=mRNA_M-pyrifera_M_contig6818.16421.1|Name=mRNA_M-pyrifera_M_contig6818.16421.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4186bp|location=Sequence derived from alignment at M-pyrifera_M_contig6818:1449..5634+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6818:1449..5634+ >mRNA_M-pyrifera_M_contig6818.16421.1 ID=mRNA_M-pyrifera_M_contig6818.16421.1|Name=mRNA_M-pyrifera_M_contig6818.16421.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig6818:1449..5634+ (Macrocystis pyrifera P11B4 male)back to top |