mRNA_M-pyrifera_M_contig68156.16420.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A7V3PN22_9BACT (Glyco_hydro_42 domain-containing protein (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3PN22_9BACT) HSP 1 Score: 249 bits (637), Expect = 8.590e-76 Identity = 137/323 (42.41%), Postives = 190/323 (58.82%), Query Frame = 1
Query: 1 FGAGIIYGTWKGYSTESEVDTWDNTSYAAIVGMGGTVTGASINWVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANK---GLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSALAQYIEDLYSSNASQCFDRVALHPYGTLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPDENAKAACIKESLDYLTKNPN---IEAATYLSLTDLPNVPDGKP-GYGLCSQNSTAETITPRASYTAFQ 945
+G GII+G W G + + +D S I GGT A+ W+ ++P QG Y+W VD V A GL + AY G TPDWAL P G+GYRFPP P+Y F+ FF A RY G++ + EFWNE NGC W N C+NG+MA +Y PWL +YEA+K G P+ ++++GGLD ++GV +Y+ED+Y + FD VA+HPYG L+++AI VL H ++ +K+W+NEYGWN+ DE AKA ++ L L K P + A+YL LTDLP+ D +GLCS++ A + PR SY F+
Sbjct: 77 YGCGIIWGKWLGLP-DDQAKAFDRASMDMIKAAGGTNVPANFAWIDIEPRQGE-YHWDYVDHQVREARARGLEIFAYTGLTPDWALPPEAPRVPGIGYRFPPDPKYIPQFTRFFTALARRYRGRVRYYEFWNEPNGCGWINDDCANGHMAHTYVPWLKLWYEAMKAGDPECVLAIGGLDYHTGVEGW---RYLEDIYRAGGGDFFDAVAIHPYG-----DPLNWNAIRDTYAVLVRHGDAHKKIWVNEYGWNTRDEEAKARYLRAVLTELAK-PRWHMVFQASYLCLTDLPDADDAAGHDFGLCSRDRQAVRVVPRPSYEVFR 388
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A3A8L8P8_9DELT (Uncharacterized protein n=3 Tax=Myxococcaceae TaxID=31 RepID=A0A3A8L8P8_9DELT) HSP 1 Score: 207 bits (526), Expect = 3.190e-58 Identity = 114/313 (36.42%), Postives = 165/313 (52.72%), Query Frame = 1
Query: 46 ESEVDTWDNTSYAAIVGMGGTVTGASINWVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPS--YAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSALAQYIEDLYSSNASQCFDRVALHPYG----TLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPDENAKAACIKESLDYLTKNPN--IEAATYLSLTDLPNVPDGKPGYGLCSQNSTAE--TITPRASYTAFQTY 951
++++ WD S + G T +W +Q T+ ++WT + E A E GL A+ G TP WAL PA +R PP PQY DF FF+ ++R+C ++ + EFWNE NGCSW NP CSNG A + YA WL +Y A+KEGCP +++S GGLD G + +QYIE +Y+ FD VA+HPYG T L+ I + V+ N +K+W +E+G+N+ DE K + +L + + I A YL++ D P YGLC N+T +T R SY ++T+
Sbjct: 144 QTKITAWDRESMKKVAEAGAVGTHIGFSWADIQATRTGPFDWTGAEAQYEAARERGLLPFAFSGTTPLWAL-PAGFTESHRSPPDPQYTADFQYFFRELSARFCNRVRYYEFWNEPNGCSWVNPNCSNGQQAQAELYADWLKLWYVAMKEGCPDVVLSTGGLDCYPGTGATGCSQYIEWIYNRIGGDYFDAVAIHPYGVKEPTSDNDAYLNIAGIEDVRRVMVERNQPWKKIWADEWGYNTRDEALKGRMVDRALSWFEDPAHDYIFQARYLTVQDTGETPVDH-NYGLCDINATVSPPAVTARPSYQTYRTH 454
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A4Q6A504_9DELT (Uncharacterized protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q6A504_9DELT) HSP 1 Score: 195 bits (495), Expect = 1.240e-53 Identity = 108/315 (34.29%), Postives = 167/315 (53.02%), Query Frame = 1
Query: 46 ESEVDTWDNTSYAAIVGMGGTVTGASINWVAVQP-TQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPS--YAPWLCRFYEAVKEGCPQMLVSVGGLDANS-GVPPSALAQYIEDLYSSNASQCFDRVALHPYGTLS----TGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPDENAKAACIKESLDYLTKNPN--IEAATYLSLTDLPNVPDGKPGYGLCSQNSTAE--TITPRASYTAFQTY 951
++++D WD S + G T +W +QP ++ Y+WT + A E GL + GNTP WAL PA +R PP QYA DF FF+ ++R+C ++ + EFWNE NGCSW N CSNG A + YA WL R+Y A+KEGCP +++S GGLD N + +QYI+ +Y+ + FD +++HPYG L+ I + V+ N +K+W +E+G+N+ DE K+ + +LD+ + + A YL++ D P +GL ++T +T R SY ++T+
Sbjct: 159 QAQIDAWDRESLKKVAEAGAVATHLGFSWEDIQPNSRTQPYDWTGAEAQYAAALERGLLPFVFTGNTPHWAL-PAGSTFPHRSPPDEQYAADFEYFFRELSARFCNRVRYYEFWNEPNGCSWVNDHCSNGQQAQAERYADWLKRWYVAMKEGCPDVVLSTGGLDCNGPSTGATGCSQYIDWIYNRIGGEYFDAISIHPYGPKEPQSGNDPYLNIPGIENVRQVMVERNQGWKKIWADEWGYNTRDETLKSLMVGRALDWFEDPAHDYVFQARYLTVQDTGETPVDH-NFGLMDIDATVSPPVLTARTSYPTYRTH 471
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A7X7J117_9BACT (PKD domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7J117_9BACT) HSP 1 Score: 170 bits (430), Expect = 2.230e-45 Identity = 109/327 (33.33%), Postives = 162/327 (49.54%), Query Frame = 1
Query: 1 FGAGIIYGTWKGYSTESEVDTWDNTSYAAIVGMGGTVTGASINWVAVQPTQGAAYNWTDVDRT---VELASENGLSMMAYMGNTPDWA-LDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSALAQYIEDLYSSNASQCFDRVALHPYGTLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPDENAKAACIKESLDYLTKNPN---IEAATYLSLTDLPNVPDGKPGYGLCSQNSTAETITPRASYTAFQTYPK 957
FG G W G + WD+ +V +G T++G + W +P +G YNW+ +D V+ G+ ++G TP WA L P + +R PP F F + +RY G++ + FWNE NGCSW N GCSN + P Y WL R +A+K+ P + +D +SGV QYI+ +Y+ A FD +++HPY T +H+ A+T NV+ ++ ++D+ +WI+EYGWNS D A + + L L K P +E A YL L D G YGL + N + PR Y AF+ + K
Sbjct: 29 FGMGRYTAAWAGKPLSYDQAIWDH-----MVTIGATISGTGLAWCDGEPVEGE-YNWSAIDYADFCVDEMLARGIEPTFFVGLTPQWAKLHPELEP--HRTPPREDCVTQFMDFHRFVANRYAGRVKYYCFWNEPNGCSWINDGCSNSDSYPLYTQWLIRCSQAIKDEDPNAKIVAANIDYHSGVAHGY--QYIQGMYTQGAGPYFDIISIHPYDWSGT---IHWQAVTDTRNVMVANGDADKPIWISEYGWNSTDYQLTADKMVQVLTEL-KKPEWSFVEQANYLVLND----GSGVENYGLMNAN-----LIPRVGYYAFRDFDK 332
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A7V4W8R9_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4W8R9_9BACT) HSP 1 Score: 147 bits (372), Expect = 5.720e-37 Identity = 102/279 (36.56%), Postives = 142/279 (50.90%), Query Frame = 1
Query: 130 WVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSALAQYIEDLYSSNASQCFDRVALHPYGTLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSP--DENAKAACIKESLDYLTKNPNIEAATYLSLTDLPNVPDGKPGYGLCSQNSTAETITPRASYTAFQTYPK 957
W V+ G Y+++D DR V + G + TP + L P + + +P LP+Y + F++ +RY GK+ + EFWNEENG SW N YAP L Y+A+KEG P +V++GGLD G Y+E LY + FD VA+HPY + G Y + I VL H + DRK+WI EYGW+ EN KA +KESLD LT +P ++ S+ L + D + YGLC +N + PR Y F+ YPK
Sbjct: 56 WDLVEKEPGI-YDFSDPDRDVAQCIKYGFEPFFLVVATPKFYLKPEMRDKPWGWPALPEYYPQAAKFYRTLAARYKGKVRYFEFWNEENGYSWHAI-----NKPEEYAPILKVAYKALKEGNPDCVVAIGGLD---GAGWKGYYHYLERLYELGCGEYFDAVAVHPYR--ADGPIDVY-GLKKIHQVLVDHGHGDRKIWITEYGWSKEYGHEN-KAKWLKESLDLLT-SPELDFVFQASVHTLCDFDDAE--YGLCDRN-----LNPRPGYYVFKNYPK 313
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A7C5FVJ1_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5FVJ1_9BACT) HSP 1 Score: 112 bits (281), Expect = 4.630e-24 Identity = 86/306 (28.10%), Postives = 141/306 (46.08%), Query Frame = 1
Query: 64 WDNTSYAAIVGMGGTVTGASINWVAVQPTQGAAYNWTDVDRTVELASENG-LSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKL-HTEFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSALAQYIEDL----YSSNASQCFDRVALHPYGTLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPD--ENAKAACIKESLDYLTKNPNIEAATYLSLTDLPNVPDGKPGYGLCSQNSTAETITPRASYTAFQTYPK 957
+D+ + I G T + +W ++ +G Y+WT ++ T++ + + + NTP WA G PP+P DF F +A RY G H E WNE+NG WE P N Y P L YE +KEG P+ +VS+GGLD G P A+ DL Y S A +D HPY + + AI+ + A++ + + ++W+ EYG+++ + E +A + + + L +P T + + + + G+GLC N + PR ++ A+Q P+
Sbjct: 47 YDDMVWRRIAEAGATSVRQAASWREIEAVKGT-YDWTQIEDTLKYCRKYPQIRPYLLIVNTPGWA---RADGQPSHLPPMPSAIPDFRKFCRALAQRYKGYADHFEVWNEQNGFGWEVPPY---NQFDKYLPLLEAAYEGLKEGNPECVVSLGGLDDADGHSP-IFAKGCYDLRAKDYGSRAM--WDAFGDHPYRETESMMA----KLRAIKGIAAAYGDCNLEMWLTEYGFHTGEMSEEEQAKRLTDYMTTLITDPEFRYVTETNYLCVADFEETTHGFGLCDAN-----LRPRPAFWAYQRLPR 333
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: A0A1G4WZK4_9MYCO (VCBS repeat-containing protein/40-residue YVTN family beta-propeller repeat-containing protein n=3 Tax=Mycolicibacterium fluoranthenivorans TaxID=258505 RepID=A0A1G4WZK4_9MYCO) HSP 1 Score: 93.6 bits (231), Expect = 2.420e-17 Identity = 80/273 (29.30%), Postives = 120/273 (43.96%), Query Frame = 1
Query: 130 WVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKLHT-EFWNEEN-GCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPSAL--AQYIEDLYSSNASQCFDRVALHPYG---TLSTGQCLHYDAITAIEN---VLASHNNSDRKLWINEYGWNSPD--ENAKAACIKESLDYLTKNPNIEAATYLSLTDLPNVPDGKP---GYGLCSQNST 903
W ++P G Y+W VDR V+ A NG++++ +G TPDWA P R P D F+ F + + G++ E WNE N G W + A Y L Y A+K P +V + A P A+ ++ +Y++ A FD V+ HPY S G+ IT E V+ ++ + ++K+W EYG + D E A+AA I D+L +E A L + PD P +GL Q+ T
Sbjct: 1123 WAGIEPADGT-YDWAAVDRVVDSAQSNGITVLGVLGTTPDWAAVPGQAQYQGR----PADLDAFAEFVTEVATHFQGRVSDYEVWNEPNAGIFW-----APAPDAAQYTALLKVAYTAIKGADPDAVVIAASVGAGPEDPGVAINPVTFLAQMYAAGAGGYFDAVSFHPYQYALLFSVGEGHAGTPITQAEQMYAVMVANGDGNKKIWATEYGEPTSDVSETAQAAYIG---DFLRTWRTLEFAGPAFLHTFADYPDPDPTQASFGLFRQDWT 1382
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: L0L2U2_METHD (Beta-1,4-xylanase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) TaxID=867904 RepID=L0L2U2_METHD) HSP 1 Score: 90.9 bits (224), Expect = 1.700e-16 Identity = 70/245 (28.57%), Postives = 110/245 (44.90%), Query Frame = 1
Query: 124 INWVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWALDPANKGLGYRFPPLPQYADDFSAFFKAATSRYCGKLHT-----EFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGL----DANSGVPPSALAQYIEDLYSSNASQCFDRVALHPY----GTLSTGQCLHYDAITAIENVLASHNNSDRKLWINEYGWNSPDENAKAACIKESL-----DYLTK 804
I W AV+ +G YNW D+ + A + G+ + + P+WA+ + PP + +DF+ F K RY + E WNE N G + A SYA L Y A+KEG P V GGL ++ + P +I LY + A FD +ALHPY S + + +I ++ ++ + +SD+K+WI EYG + +K I E + DY+++
Sbjct: 67 IEWRAVEKERGI-YNWETSDKVAKTAQKYGIKSLIIIHLPPEWAIQEGLYNENRQSPP--KEFEDFAYFAKQVAIRYKESAYGPIEYFEIWNEPN----LEGGWYPASNAESYAELLKLSYTAIKEGNPNARVISGGLAMAVTKDNNISP---VDFINSLYEAGAKGYFDAIALHPYTYPAAPNSEVEWNGWKSIDSVREIMVKNGDSDKKIWITEYGAPTYGPGSKFEIITEGVFNYGSDYMSE 301
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: UPI000DDBEA69 (cellulase family glycosylhydrolase n=1 Tax=Paracoccus endophyticus TaxID=2233774 RepID=UPI000DDBEA69) HSP 1 Score: 86.3 bits (212), Expect = 2.540e-15 Identity = 64/221 (28.96%), Postives = 104/221 (47.06%), Query Frame = 1
Query: 124 INWVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWAL-DPANKGLGYRFPPLPQYADDFSAFFKAATSRYC--GKLHTEFWNEENGCSWENPGCSNGNMAPSYAPWLCRFYEAVKEGCPQMLVSVGGL----DANSGVPPSALAQYIEDLYSSNASQCFDRVALHPYGTLSTGQCLHYDAITA---------IENVLASHNNSDRKLWINEYG 738
+NW +VQ +++WT++DR V+LA+ G+ ++ +G+ P+WA DP P P+ +F+ F AA RY G E WNE N + P + A +YA L A++ P + +GGL D +S A +++E +Y+ A FD V HPY TG+ L A I +++ + ++ + +WI EYG
Sbjct: 94 LNWGSVQKDGPDSFDWTEMDRIVDLAAAVGIGLLPVVGSAPEWAWSDPEG-------PSPPRDPAEFARFVAAAVDRYAPRGISTWEIWNEPN---LDGPFPPRPDAA-AYAALLKAAAPAIRAADPDATIILGGLAAVTDTDSAGEAIAAVEFLEAVYAQGAGGSFDAVGFHPY----TGEDLPDLAARGNSWRLMAGPIRDIMVAQGDAAKPIWITEYG 299
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Match: UPI00190D3E49 (cellulase family glycosylhydrolase n=2 Tax=unclassified Paracoccus (in: Bacteria) TaxID=2688777 RepID=UPI00190D3E49) HSP 1 Score: 85.1 bits (209), Expect = 4.770e-15 Identity = 75/278 (26.98%), Postives = 129/278 (46.40%), Query Frame = 1
Query: 124 INWVAVQPTQGAAYNWTDVDRTVELASENGLSMMAYMGNTPDWA-LDPANKGLGYRFPPLPQYADDFSAFFKAATSRY--CGKLHTEFWNEENGCSWENPGCSNGNMAP-----SYAPWLCRFYEAVKEGCPQMLVSVGGLDANSGVPPS----ALAQYIEDLYSSNASQCFDRVALHPYGTLSTGQCLHYD---AITA--IENVLASHNNSDRKLWINEYGWNSPD------ENAKAACIKESLDYLTKNPNIEAATYLSLTDLPNVP-DGKPGYGL 885
+NW ++Q +++W+++DR V+LA+ G+ ++ G+TP+WA +P + PP A F F +AA RY G E WNE N +G P ++A L + A++ P V +GGL A + S A ++++ +Y A FD + HPY S + A+ A I +++A+H ++++K+WI EYG + + E+ +A + S+D P + + S DL P D + +GL
Sbjct: 66 LNWASIQRDGPDSFDWSEMDRIVDLAASFGIGVLPVAGSTPEWAWANPEDHS-----PPGDPQA--FGRFLEAAVRRYEPRGIDTWEIWNEPN---------LDGPFPPRPDPVAFAAILKAAHAAIRAADPDATVILGGLAAATSTDRSGRAIAAVEFLQRVYDEGAGGSFDALGFHPYTGASLPDLRGWRNSWALMAGPIRDLMAAHGDAEKKIWITEYGAPTNEAEGGAPESRQAEQLAASVDLARVTPWLGPVFWYSYRDLGTDPKDREDWFGL 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68156.16420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68156.16420.1 >prot_M-pyrifera_M_contig68156.16420.1 ID=prot_M-pyrifera_M_contig68156.16420.1|Name=mRNA_M-pyrifera_M_contig68156.16420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=321bp FGAGIIYGTWKGYSTESEVDTWDNTSYAAIVGMGGTVTGASINWVAVQPTback to top mRNA from alignment at M-pyrifera_M_contig68156:174..1136+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68156.16420.1 ID=mRNA_M-pyrifera_M_contig68156.16420.1|Name=mRNA_M-pyrifera_M_contig68156.16420.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=963bp|location=Sequence derived from alignment at M-pyrifera_M_contig68156:174..1136+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68156:174..1136+ >mRNA_M-pyrifera_M_contig68156.16420.1 ID=mRNA_M-pyrifera_M_contig68156.16420.1|Name=mRNA_M-pyrifera_M_contig68156.16420.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1926bp|location=Sequence derived from alignment at M-pyrifera_M_contig68156:174..1136+ (Macrocystis pyrifera P11B4 male)back to top |