mRNA_M-pyrifera_M_contig6806.16406.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 3.180e-147 Identity = 241/385 (62.60%), Postives = 274/385 (71.17%), Query Frame = 1
Query: 19 QGKIDNQDTSSGTPRTHAGGGWFAANGQTKKEDGKVEVKDVNSSS------ESAAGSERWR---VKTERRRAGAXXXXGDRGEDSSGGGRSGGCDGDTK----------GYCGALPPNERQKQCLSLMLAYESGKTSDLVQCVIVRDRSGMNRLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
QG + D +SG A G WFAA G+ K +G + S ++AA + + V ++RR G +GE G +G C GD + + +C SLML+YE G SDLVQCV+VRDRSGMNRLYPQYRFFF+GR QLMM+ QKCS NR+SNYHVFDM+RGGF+TRLSKKNGNYLGKVRTNLKRTEATVFTNDQ EVAELGAISFEKPGLVDHLR+GSQPRKF+ LLPALDCDG+P+AHKVDPYD DS MLS M +GRHG+MFLLQ+REPT+TKGNYRLNF GRVTVPSVKNFQLVSPDD LHTVCQFGKVGEDRFHLDYRAPINAFQA CI++AQFNF
Sbjct: 237 QGTAVSHDKTSGIKPRTAAGAWFAAQGEKKAREGSKRDGNGGESGGERDGVDAAASDDSFSDNIVSSQRRFCG-------KGE----GMVTGRCGGDETTEEDGGRGKDSWASIVEGGRSPARCKSLMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQTRLSKKNGNYLGKVRTNLKRTEATVFTNDQ----------------EVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.960e-101 Identity = 150/247 (60.73%), Postives = 184/247 (74.49%), Query Frame = 1
Query: 376 LVQCVIVRDRSGMNRLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
++QCVI+R+R G++RLYP Y+ +FQ R+ LMM QK S +R+SNYH+FDMHRG LSKK GNYLGKVR+N K+T+ T++TNDQ ++ ELGA+ FEKPGLVDH+ EGSQPRKF LLP +D D P+ HKVDPYD M+ + R G MFLLQT++P F GNYRLNFRGRVTVPSVKNFQLV+PDD+ + V QFGKVG+DRFHLD+RAP+NAFQAF I L+QFNF
Sbjct: 1 MMQCVILRERQGLHRLYPLYKLYFQDRD-TLMMAAQKHSKSRTSNYHIFDMHRGSAARTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKE----------------ELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 285 bits (730), Expect = 2.890e-92 Identity = 142/252 (56.35%), Postives = 179/252 (71.03%), Query Frame = 1
Query: 361 GKTSDLVQCVIVRDRSGMNRLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
G +++V+C +VRDR+G RLYPQYR +FQ + L ++ QK S NR+SNYH+FDM R GF LSKKNGNYLGK+R+N K+TE +FTND ++ ELGAI+FEK G +D ++EGSQPRK +LP LD DG PL +K + ++ +LS + G+ G MF ++++P F KGNYRLNF GRVTV SVKNFQLVSPDD+ + VCQFGKV EDRFHLDYRAP NAFQAF +TL QFNF
Sbjct: 12 GAGAEMVRCAVVRDRTGARRLYPQYRMYFQDTD-TLALVAQKQSKNRTSNYHIFDMMRAGFGNHLSKKNGNYLGKLRSNSKKTENVIFTNDHEKE----------------ELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.230e-82 Identity = 128/225 (56.89%), Postives = 159/225 (70.67%), Query Frame = 1
Query: 442 FFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
+FQ R+ QL+M+G+K + NR+ NYH+FDM R F LSKKNGNYLGK+RTNL++T+ ++TND R+ E+GAI F KPG VD ++EGSQPRK LLP LD DG P+ +K +P D+ +L + + G MF LQT++P F KGNYRLNF GRVTV SVKNFQL SPDD+ + VCQFGKV EDRFHLDYRAP+NAFQAF + L QFNF
Sbjct: 2 YFQDRD-QLVMVGKKQAQNRTPNYHIFDMTRAQFGNHLSKKNGNYLGKLRTNLRKTDTIIYTNDAERE----------------EMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.260e-64 Identity = 106/259 (40.93%), Postives = 158/259 (61.00%), Query Frame = 1
Query: 355 ESGKTSDLVQCVIVRDRSGMNRLYPQYRFFFQGRE----HQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGR-HGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
+ G +VQC+IVRDRSG+ RL P+Y + QG +L+++ +K ++ +YH++++ RG RL KK GNY+GK++ + + E ++ N++ + E+GA+ F KP ++DH+R+G+QPRK +LP D + P+ K D + +L + + L+ +EP F GNYRLNF GRVTVPSVKNFQLV P D+ +CQFGKV +DRFHLD++ P+N FQAFC+ LAQFN+
Sbjct: 5 KGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKD----------------EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 214 bits (545), Expect = 9.970e-62 Identity = 106/259 (40.93%), Postives = 158/259 (61.00%), Query Frame = 1
Query: 355 ESGKTSDLVQCVIVRDRSGMNRLYPQYRFFFQGRE----HQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGR-HGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
+ G +VQC+IVRDRSG+ RL P+Y + QG +L+++ +K ++ +YH++++ RG RL KK GNY+GK++ + + E ++ N++ + E+GA+ F KP ++DH+R+G+QPRK +LP D + P+ K D + +L + + L+ +EP F GNYRLNF GRVTVPSVKNFQLV P D+ +CQFGKV +DRFHLD++ P+N FQAFC+ LAQFN+
Sbjct: 224 KGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSRGHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKD----------------EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 197 bits (502), Expect = 8.810e-56 Identity = 108/282 (38.30%), Postives = 168/282 (59.57%), Query Frame = 1
Query: 292 YCGALPPNERQKQCLSLMLAYESGKTSDLVQCVIVRDRSGMNRLYPQYRFFFQG---REHQ-LMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKV---DPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
+ G N K+ + ++ T +VQC+IVR R + R+ +Y+ + QG + H+ L+++ +K + + +YH++++ RG RL+KK GNY+GK++ + + E ++ N++ +Q E+G + F KP ++DH+R+G+QPRK ++P ++ P+ V DPY + + S+F + +EP F GNYRLNFRGRVTVPSVKNFQLVS DD+ CQFGKV +DRFHLD++ P+NAFQAFC+ LAQFN+
Sbjct: 166 FSGPKTNNFTDKESDDFEVVPKNDPTIPMVQCLIVRRRVVLQRI-TEYQLYLQGGRKKGHEKLILVARKQAQKQGCSYHIYNVSRGHLGGRLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQ----------------EVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQGCSVF--ERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 174 bits (441), Expect = 8.660e-49 Identity = 106/267 (39.70%), Postives = 149/267 (55.81%), Query Frame = 1
Query: 340 LMLAYESGKTSDLVQCVIVRDRSGMN-RLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFRTRLSKKNGNYLGKVRT-NLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYM-------NKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFN 1113
+++A+ G + +QC +VRDR+ + +LYP Y + + ++ K S NR+SNYH+FDM RG ++LSKK GNYLGK+R N R E ++ + ++ EL +SFEK L++ L EG+QPRK L+ D V P + S LS + K +M LL+T+EP GNYRLNF GRV +PSVKNFQ+V ++ +CQFGKV ED FHLD++ P NA +AF + L QFN
Sbjct: 2 VLVAHPRGVRNQHIQCTVVRDRNSVGGKLYPSYELILEN-PRKTIIKACKMSYNRTSNYHLFDMTRGTAGSKLSKKAGNYLGKLRARNTNRLECSLLNHKADKE----------------ELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTG-TTEGVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A6G0XFA1_9STRA (Tub domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFA1_9STRA) HSP 1 Score: 173 bits (439), Expect = 7.090e-47 Identity = 103/252 (40.87%), Postives = 146/252 (57.94%), Query Frame = 1
Query: 376 LVQCVIVRDRSGMNRLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRGGFR-TRLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDD-SHMLSYMNKGRHGS--MFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLH-TVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
L++ IVR +G NRL PQY+FF + + L++L QK NNR+SNYH+FDM RG F RL+KK+GNY+GK+R++ + E + + AR +ELGA+ F D S+PRK + P L D + H D S ++ + +H + +F+ +++EP + KG YRLNF GRV++PSVKNFQLV+ V QFGKV + FHLD++ PI FQAF I L+QFN+
Sbjct: 168 LIEGSIVRCNNGTNRLAPQYQFFIKNK---LVLLAQKQLNNRTSNYHIFDMSRGAFTGQRLTKKSGNYVGKLRSSFSKQENVMVSAQAAR----------------SELGAVLF------DSKISNSKPRKLKVVCPRLSSDHETIPHAASKKQDTFSALIEQLKTEKHPTDRIFVFESKEPEYEKGCYRLNFNGRVSIPSVKNFQLVATGHSARGIVLQFGKVSDKLFHLDFKHPITPFQAFAIALSQFNY 394
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Match: A0A1V9ZE23_9STRA (Tub domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE23_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.860e-46 Identity = 112/263 (42.59%), Postives = 148/263 (56.27%), Query Frame = 1
Query: 334 LSLMLAYESGKTSDLVQCVIVRDRSGMNRLYPQYRFFFQGREHQLMMLGQKCSNNRSSNYHVFDMHRG-GFRT-RLSKKNGNYLGKVRTNLKRTEATVFTNDQARQHACESDTIREPFDEVAELGAISFEKPGLVDHLREGSQPRKFSALLPALDCDGAPLAHKVDPYDDDSHMLSYMNKGRHGSMFLLQTREPTFTKGNYRLNFRGRVTVPSVKNFQLVSPDDMLHTVCQFGKVGEDRFHLDYRAPINAFQAFCITLAQFNF 1116
L L + S L + IVR G NRL PQY+FF + + +++L QK NNR+SNYH+FDM RG G T +LSKK+GNY+GK+R++ R E V + QA E ELGAI FE H S+PRK + + P L DG + + D S +L + GR + +L +EP + +G YRLNF GRV+VPSVKNFQLV + QFGKV + FHLD+R P+ FQAF I L+QFN+
Sbjct: 131 LPLSVLPGSATALHLTEGSIVRCNHGANRLTPQYQFFIKNK---MVLLAQKQLNNRTSNYHIFDMSRGTGAATYKLSKKSGNYIGKLRSSFGRQE-NVMISAQA---------------EKRELGAILFETK--TSH----SKPRKLTVVCPGLTTDGEAKS-VLSTGDKFSSLLEQVKLGRTADLAILDNKEPEYERGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALSQFNY 367 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6806.16406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6806.16406.1 >prot_M-pyrifera_M_contig6806.16406.1 ID=prot_M-pyrifera_M_contig6806.16406.1|Name=mRNA_M-pyrifera_M_contig6806.16406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=373bp ERPKNPQGKIDNQDTSSGTPRTHAGGGWFAANGQTKKEDGKVEVKDVNSSback to top mRNA from alignment at M-pyrifera_M_contig6806:5471..12654+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6806.16406.1 ID=mRNA_M-pyrifera_M_contig6806.16406.1|Name=mRNA_M-pyrifera_M_contig6806.16406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7184bp|location=Sequence derived from alignment at M-pyrifera_M_contig6806:5471..12654+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6806:5471..12654+ >mRNA_M-pyrifera_M_contig6806.16406.1 ID=mRNA_M-pyrifera_M_contig6806.16406.1|Name=mRNA_M-pyrifera_M_contig6806.16406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2238bp|location=Sequence derived from alignment at M-pyrifera_M_contig6806:5471..12654+ (Macrocystis pyrifera P11B4 male)back to top |