mRNA_M-pyrifera_M_contig6797.16395.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6797.16395.1
Unique NamemRNA_M-pyrifera_M_contig6797.16395.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: D8LGV3_ECTSI (2OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.070e-91
Identity = 152/252 (60.32%), Postives = 178/252 (70.63%), Query Frame = 1 
Query:    1 DPIHLKGNTGQLRFWPSLLHNDTQKRLFDELTLSQGLNPAGQETTQGSG--------SGSTRGVEEGSA-GRWRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPKRNAAELKEEEHARSKKSRLPVSSRTMRRHRGKGGK 729
            +  HL+  TG+LRFWPSLL +  Q+RLF+ELT+   L P   +              SG+    E+G+A GRW QRPIKLFGREI QPRLTCFYGR  ++YRYSGKTLEA+PW+GV  IQ+IL     A GV  GYFNCVLLNWYRDG DYMGWHSD+EKELEKGAAIASVSLG+ RRFQLRRK D  QK+EF L GGSLLLMEGSTQ+HWQHRVPKR A E +E   +  ++      S  +    G+GGK
Sbjct:   49 ETFHLQSGTGKLRFWPSLLTDAAQRRLFEELTVDPDLRPLDPKAGSSXXXXXXXXXXSGNPGLREDGAARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAAAGAAAGVDPGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDHAQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEEREVRQSPQERREAKALSPLLLSWSGQGGK 300
[Close]
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A0M1K085_9CYAN (2OG-Fe(II) oxygenase n=2 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1K085_9CYAN)

HSP 1 Score: 153 bits (387), Expect = 2.360e-42
Identity = 78/145 (53.79%), Postives = 95/145 (65.52%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            W+  PIK+FG+ +LQPRLT +YG K   Y YSG T++  PW   +P+  I  ++E         FN VLLN YRDG DYMGWHSD+EKEL KG AIAS+SLG  RRF  RRK + + K E +L  G  L+M G TQK WQH VPK
Sbjct:   45 WKHEPIKIFGKSVLQPRLTAYYGTK--AYTYSGVTMQPLPWN--APLLQIKEKIEPLVNT---QFNGVLLNLYRDGQDYMGWHSDDEKELVKGGAIASLSLGETRRFIFRRKDNHQIKFELKLADGDFLVMGGDTQKFWQHYVPK 182
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BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: S2E0A9_INDAL (Alkylated DNA repair protein AlkB n=2 Tax=Cyclobacteriaceae TaxID=563798 RepID=S2E0A9_INDAL)

HSP 1 Score: 152 bits (385), Expect = 4.990e-42
Identity = 75/146 (51.37%), Postives = 98/146 (67.12%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPKR 627
            W+Q PI +FG++++QPRLT  YG  +I Y YSG  +EA PW G   +Q+I   VE   G    +F  VLLN+YR+G+D MGWH DNEKEL     IASVS G+ER FQ+R       K+   L+ GSLLLM+GS+Q HW+H++PKR
Sbjct:   44 WKQEPIWIFGKKVMQPRLTALYGDPEIPYGYSGIQMEAYPWTG--KLQEIKERVEVQAGT---HFTHVLLNYYRNGDDSMGWHRDNEKELGINPVIASVSFGAEREFQMRHYKQKNVKVNVHLKDGSLLLMQGSSQHHWEHQLPKR 184
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BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: T2JKF6_CROWT (Alkylated DNA repair protein n=1 Tax=Crocosphaera watsonii WH 0402 TaxID=1284629 RepID=T2JKF6_CROWT)

HSP 1 Score: 150 bits (378), Expect = 3.450e-41
Identity = 76/145 (52.41%), Postives = 98/145 (67.59%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            W+  PIKLFG+ ILQPRLT +YG K+  Y YSG ++++ PW     + DI  ++E  + V    FN VLLN YRDGND +GWHSD+E+EL  G+ IAS+SLG  RRF  RR+ D   K+E +L  G LL+M   TQK WQH+VPK
Sbjct:   44 WKHEPIKLFGKSILQPRLTAYYGNKN--YPYSGISMQSQPW--TPTLLDIKEKIERISQV---QFNAVLLNLYRDGNDSIGWHSDDERELADGSVIASLSLGETRRFIFRRRDDHGNKIERKLNHGDLLIMRDETQKFWQHQVPK 181
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BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: UPI001684B391 (alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=Planktothrix TaxID=54304 RepID=UPI001684B391)

HSP 1 Score: 150 bits (379), Expect = 3.710e-41
Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            W+Q PIK+FG+ +LQPRLT +YG  D  Y YSG T++  PW    P+  I  ++E         FN VLLN YRDG DY+GWHSD+EKEL KG  I S+SLG  RRF  RR+ + + K+E  L  G  L+M G TQK WQH VPK
Sbjct:   45 WKQEPIKIFGKSVLQPRLTAYYG--DRAYTYSGVTMQPLPWN--LPLLQIKEKIEPLVNT---QFNGVLLNLYRDGQDYIGWHSDDEKELAKGGVIGSLSLGETRRFIFRRRDNHQNKIELTLSDGDFLIMGGETQKFWQHHVPK 182
[Close]
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A352A9Z2_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352A9Z2_9CYAN)

HSP 1 Score: 149 bits (377), Expect = 6.550e-41
Identity = 87/206 (42.23%), Postives = 112/206 (54.37%), Query Frame = 1 
Query:    7 IHLKGNTGQLRFWPSLLHNDTQKRLFDELTLSQGLNPAGQETTQGSGSGSTRGVEEGSAGRWRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            I L+     + F+PSLL      R+F +  LSQ LN                         WRQ  IK++GR + QPRLT +Y    I+Y YSG T+  SPW     + D+  + E  +GV    FN VLLN YRDGND MGWHSD+E EL     I S+SLG  RRF LR +T+   K +  L  GS LLM+G+TQ +WQH++PK
Sbjct:    4 IPLQLPDADIVFYPSLLDEQESDRIFTQ--LSQTLN-------------------------WRQDWIKIYGRSMPQPRLTAWYANPGISYTYSGITMHPSPW--THTLLDLKAKAEAVSGV---VFNSVLLNLYRDGNDSMGWHSDDEPELGDNPVIGSLSLGGTRRFMLRHRTEKALKHQLELTSGSFLLMQGTTQHYWQHQIPK 177
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BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A355CG02_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CG02_9CYAN)

HSP 1 Score: 149 bits (377), Expect = 7.590e-41
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            W+Q PIK+FG+ ++QPRLT +YG +   Y YSG T++  PW    P+  I +E+E         FN VLLN YR+G DYMGWHSD+E+ L KGA IASVS G  RRF LRR+ + + K+E  L  G  L+M G TQK WQH VPK
Sbjct:   45 WKQEPIKIFGKSVMQPRLTAYYGTQ--AYTYSGVTMQPLPWN--EPLLQIKQEIEPLVNT---QFNGVLLNLYRNGQDYMGWHSDDERNLAKGAIIASVSFGETRRFILRRRDNHQIKVELNLGDGDFLVMGGDTQKFWQHHVPK 182
[Close]
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A7X6CB17_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Microcoleus sp. SU_5_3 TaxID=2720482 RepID=A0A7X6CB17_9CYAN)

HSP 1 Score: 149 bits (375), Expect = 1.600e-40
Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            W+Q PIK+FG+ +LQPRLT +YG +   Y YSG T++  PW   +P+  I +E+E         FN VLLN YR+G DYMGWHSD+E  L KGA IAS+S G  RRF LRR+ + + K+E  L  G  L+M G TQK WQH VPK
Sbjct:   47 WKQEPIKIFGKSVLQPRLTAYYGTQ--AYTYSGVTMQPLPWN--APLLQIKQEIEPLVNT---QFNGVLLNLYRNGQDYMGWHSDDEHNLAKGAIIASLSFGETRRFILRRRDNHQIKIELNLGDGDFLVMGGDTQKFWQHHVPK 184
[Close]
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A1C0UXP1_9CYAN (2OG-Fe(II) oxygenase n=1 Tax=Oscillatoriales cyanobacterium USR001 TaxID=1880991 RepID=A0A1C0UXP1_9CYAN)

HSP 1 Score: 148 bits (374), Expect = 1.790e-40
Identity = 74/148 (50.00%), Postives = 100/148 (67.57%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLLLMEGSTQKHWQHRVPKRNA 633
            W+Q PI +FG+ +LQPRLT +YG K   Y YSG T++   W+  + +  I  ++E  T V    FN VLLN YRDG+DY+GWHSD+EKEL +G+ I S+SLG  RRF  RR+ + + K+E  L+ G  L+M G TQK+WQH+VPK  A
Sbjct:   40 WQQNPIIMFGKLVLQPRLTAYYGEKP--YTYSGVTMQPKSWQ--NALLQIKDKIELLTEV---KFNAVLLNLYRDGSDYLGWHSDDEKELAEGSVIGSLSLGESRRFLFRRRDNHQFKVELNLKHGDFLIMSGKTQKYWQHQVPKTKA 180
[Close]
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Match: A0A431U9K3_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=Hymenobacter gummosus TaxID=1776032 RepID=A0A431U9K3_9BACT)

HSP 1 Score: 148 bits (373), Expect = 2.920e-40
Identity = 79/148 (53.38%), Postives = 94/148 (63.51%), Query Frame = 1 
Query:  190 WRQRPIKLFGREILQPRLTCFYGRKDITYRYSGKTLEASPWEGVSPIQDILREVETATGVGGGYFNCVLLNWYRDGNDYMGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDS---KQKLEFRLRGGSLLLMEGSTQKHWQHRVPK 624
            WR  PIKLFG+E+LQPRLT +YG     YRYSG T++  PW     +Q + R VETA       FN VLLN YR G D MGWH+D+E EL     IASVSLG+ RRF+LR +  +      L   L GGSLLLM+G TQ +WQH VPK
Sbjct:   38 WRHEPIKLFGKEVLQPRLTAWYGDAGAAYRYSGLTMQPEPW--TPALQQLRRRVETACAAA---FNSVLLNLYRHGQDSMGWHADDEPELGPAPVIASVSLGAPRRFRLRPRPGTGPAHPPLTLELPGGSLLLMQGPTQHYWQHAVPK 180
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6797.16395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGV3_ECTSI1.070e-9160.322OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosu... [more]
A0A0M1K085_9CYAN2.360e-4253.792OG-Fe(II) oxygenase n=2 Tax=Planktothricoides Tax... [more]
S2E0A9_INDAL4.990e-4251.37Alkylated DNA repair protein AlkB n=2 Tax=Cyclobac... [more]
T2JKF6_CROWT3.450e-4152.41Alkylated DNA repair protein n=1 Tax=Crocosphaera ... [more]
UPI001684B3913.710e-4151.72alpha-ketoglutarate-dependent dioxygenase AlkB n=2... [more]
A0A352A9Z2_9CYAN6.550e-4142.23Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
A0A355CG02_9CYAN7.590e-4151.72Alpha-ketoglutarate-dependent dioxygenase AlkB n=2... [more]
A0A7X6CB17_9CYAN1.600e-4051.72Alpha-ketoglutarate-dependent dioxygenase AlkB n=1... [more]
A0A1C0UXP1_9CYAN1.790e-4050.002OG-Fe(II) oxygenase n=1 Tax=Oscillatoriales cyano... [more]
A0A431U9K3_9BACT2.920e-4053.38Alpha-ketoglutarate-dependent dioxygenase AlkB n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6797contigM-pyrifera_M_contig6797:4555..8865 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.0
Seed ortholog evalue1.3e-24
Seed eggNOG ortholog2880.D8LGV3
Preferred nameALKBH3
KEGG koko:K10859,ko:K10860
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0008283,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0016787,GO:0031974,GO:0031981,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035552,GO:0035553,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0051747,GO:0055114,GO:0070013,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1990930
EggNOG free text desc.RNA N1-methyladenosine dioxygenase activity
EggNOG OGs2QW9E@2759,COG3145@1
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-28_001310.1
EC1.14.11.33,1.14.11.54
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons5
Model size884
Cds size315
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.9444041-UTR-M-pyrifera_M_contig6797:4554..48321622816570.9444041-UTR-M-pyrifera_M_contig6797:4554..4832Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 4555..4832 +
1692278053.2037225-UTR-M-pyrifera_M_contig6797:4554..48321692278053.2037225-UTR-M-pyrifera_M_contig6797:4554..4832Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 4555..4832 +
1622816570.9599419-UTR-M-pyrifera_M_contig6797:5422..55701622816570.9599419-UTR-M-pyrifera_M_contig6797:5422..5570Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 5423..5570 +
1692278053.2150807-UTR-M-pyrifera_M_contig6797:5422..55701692278053.2150807-UTR-M-pyrifera_M_contig6797:5422..5570Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 5423..5570 +
1622816571.0250196-UTR-M-pyrifera_M_contig6797:8722..88651622816571.0250196-UTR-M-pyrifera_M_contig6797:8722..8865Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 8723..8865 +
1692278053.2584755-UTR-M-pyrifera_M_contig6797:8722..88651692278053.2584755-UTR-M-pyrifera_M_contig6797:8722..8865Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6797 8723..8865 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.9756515-CDS-M-pyrifera_M_contig6797:5570..55861622816570.9756515-CDS-M-pyrifera_M_contig6797:5570..5586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 5571..5586 +
1692278053.2237256-CDS-M-pyrifera_M_contig6797:5570..55861692278053.2237256-CDS-M-pyrifera_M_contig6797:5570..5586Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 5571..5586 +
1622816570.992362-CDS-M-pyrifera_M_contig6797:6414..65151622816570.992362-CDS-M-pyrifera_M_contig6797:6414..6515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 6415..6515 +
1692278053.2320502-CDS-M-pyrifera_M_contig6797:6414..65151692278053.2320502-CDS-M-pyrifera_M_contig6797:6414..6515Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 6415..6515 +
1622816571.0026965-CDS-M-pyrifera_M_contig6797:8436..85781622816571.0026965-CDS-M-pyrifera_M_contig6797:8436..8578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 8437..8578 +
1692278053.2401745-CDS-M-pyrifera_M_contig6797:8436..85781692278053.2401745-CDS-M-pyrifera_M_contig6797:8436..8578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 8437..8578 +
1622816571.0125945-CDS-M-pyrifera_M_contig6797:8666..87221622816571.0125945-CDS-M-pyrifera_M_contig6797:8666..8722Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 8667..8722 +
1692278053.2482626-CDS-M-pyrifera_M_contig6797:8666..87221692278053.2482626-CDS-M-pyrifera_M_contig6797:8666..8722Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6797 8667..8722 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6797.16395.1prot_M-pyrifera_M_contig6797.16395.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6797 5571..8722 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6797.16395.1

>prot_M-pyrifera_M_contig6797.16395.1 ID=prot_M-pyrifera_M_contig6797.16395.1|Name=mRNA_M-pyrifera_M_contig6797.16395.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MGWHSDNEKELEKGAAIASVSLGSERRFQLRRKTDSKQKLEFRLRGGSLL
LMEGSTQKHWQHRVPKRNAAELKEEEHARSKKSRLPVSSRTMRRHRGKGG
KRGR*
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mRNA from alignment at M-pyrifera_M_contig6797:4555..8865+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6797.16395.1 ID=mRNA_M-pyrifera_M_contig6797.16395.1|Name=mRNA_M-pyrifera_M_contig6797.16395.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4311bp|location=Sequence derived from alignment at M-pyrifera_M_contig6797:4555..8865+ (Macrocystis pyrifera P11B4 male)
GACCCGATCCACCTCAAAGGCAACACCGGACAGCTCCGCTTCTGGCCGTC
CCTCCTCCACAACGATACGCAAAAGCGGCTGTTCGATGAGCTCACCCTCA
GCCAGGGCCTCAATCCAGCCGGCCAAGAGACCACCCAAGGCAGTGGTTCG
GGTAGTACCCGAGGGGTGGAGGAAGGCTCCGCGGGAAGGTGGAGGCAACG
GCCGATAAAGCTCTTCGGGAGGGAGATACTGCAGCCGCGGCTGACGTGCT
TCTACGGCCGAAAGGACATCACGTACAGGTGAGTACGGCAGGGCTCTGTT
TGGACCTTGATCCAGCTCCGGCGAAATGGTTGAAACTCACATGACTTTAT
TTGATTTTAGAACGAGGCATTTTTCTCTGTACAGCGCAAGTTCTAACATA
TTTAAACACCAACCCTACCCTTAGCCCCAACCCCCGACCGCCTGGGCAAA
TTCTTTCAGTGAAGATGTAATGAGGCGTTTAGTTTGTATTGCCAACCATT
TCGTTGACGCTAGGTCAAGTCGTAACCACTGACTGCTGCTGCAAGTGAAC
ACCGACACCTCAAGCTGGGGTGGCCGCCTCGAGCGCGGGTTTTGGAGCGA
GCGGCTTACGGAAGACGATGGGGCGAGGGCGGCGACGACAATGCCGGAGG
CTTTTTTCAGTGTTTTTTTTTGTTTTCGTGCTGGGGGTTGAGATAGTGTC
GTTGTTTTTTTTAAGGCGAGTCGAGAAGGAAGAAGACGGGGTGGTGACGG
CGTGATGCACGGGGCCGCCAGGAAACAGTCCCAGCCGGCTGTGTCTGGCT
TACCAGTGGTAAACTTCACCGTATCTCCCGTCCGCGCCATGTCGTGTGGA
TTCTGTGCGCCGCCGAAGGTATAGCGGCAAGACTCTGGAAGCGTCACCAT
GGGAAGGCGTTTCCCCCATCCAGGATATTCTCCGCGAGGTCGAAACGGCG
ACCGGGGTGGGCGGCGGCTACTTCAACTGCGTCCTCCTCAACTGGTACCG
CGACGGGAATGACTACATGGGGTGGCATTCGGGTGAGCTCTTTCTCTCGG
AACGAAGCGATGCGTTAGCAGCGGCGGCGGCCCGTTCGTTCTCTTGCGTT
TGGCCCCGGAAACGCTGCAGCGGAAGAGCATGCAGTAGCGTTGCGCCGAG
CATATAGGTAAGGGGAGAGTAAACATACCGGCACCAGGTATGAACGTCGT
GATAAAATGTATCTCTCTCAGGTCAGGCGTCCAAACTTCCTGCCCTGGAA
GTTTCATGTCTAAGCGTGTCACCTTTCTAATACGGAAAGTAAACAATGTA
GCGAATTGAGTTGTTCTTGCTCTAGAAAAACAAATGTTCCGACAGTCCTG
ACTTTTGTTCTCTGCTGTCGCTTGCTCGAAGCAGAACTACTGAAAGCCCT
CTCTCCCCACGCTGCGCTCAGGCCCCCTCTCCCGCCGCTCCCCTTCCTCC
CTAGACGGTGCCGGCCCAGCTCGCATTAGCCTTGGCATGCGATGCGCCGT
CTTATTATTCTAGCGATGAGCAGAATCTTCTCTGCCTGTCACATGCACGC
ATGATAGTTCTCCACGATTCACTGTCGGAGCGTGCCCCGCGTATCTCTAT
TGGGAGCGCATGCCCGTTATGAGGGACAAAACACTTAAAAATTTGGGTCA
GATTTTGAGTTCTCTATAGCGCACTACTTGAAAGGATTAATGACTTGTTA
GACACCTCCGTCTATCGTACCTCCTGAACACCTGCGTCACGCAAGCGGGT
GGCTGGTAGAAAAAGACCAAGGCCATGGTACGCGAAAAAAAGCTATGATT
GTCACGCCCCTTTTCGCACCCAACCCGACCCCGTCCCTCCCCGACACGCG
CCGGCAAAAGACAATGAGAAGGAGCTGGAAAAGGGGGCGGCAATAGCGTC
CGTTTCGCTGGGCTCGGAGCGACGGTTCCAGCTGCGCCGAAAAACGGACA
GCAAGCAAAAGGTGCGTGTTCGGCCTGCACACAAACCTCTTCGGGACCAA
GAGATGGCTATCAAAACAATGGTTGGTAACTTTAGTACTATCAACCATCT
ACGAGCGGCGAGAGCGCCTAAAACCAGGGGTGGGATCATGCTGCGCCCGT
GCCGTACGACTCCTAGTATCAACCATTTCAACTCGGGTACCACGTCTTTT
TTTGTTTTTTTCGTCATCCCCCAATTTCGCAGTGGCCGTTGCTGCAACCG
TCACTTTTGTAACCGTCAATTGTTTCCCTCACACAAGTCCCCAAAAGAAG
GTCAAAAGAGAATTATTCGCCGGTTCAACGAAAAACAGGCGAGCCGGAAT
TGCATTGTGACCGACGGAATACTCGTCATGGCTCCCTACCGACGTAGAGT
GATTGTCGACCAGGGTCCGAAACAAAACCGGTTTCGTGGTTGCGCATTTC
TGGCAGTGGTCAATGGGGTACATGCAGAAACTCCGAGACAATAGTGGCGT
CAGAAAACCCGACGGTATAGCGTAAGCCGGACAAAGCTGTGACTAGGTAC
CCCGGTGTTTTTTATTTCGCGGCTATGATGCCGTAACTTCAAGGAGGGGA
AAGACGTGCTAATTCGATCGTTTTCTTTCTCCTGCACGTGCATGGGCGCG
CGAGTGTAGCAGAGCTTTTACCTGGAGCGGACGGCGGCACGGCTGCTGCT
GCTGTTGATAGGCCTAGAGACTAGGACCATTCTTGGGCTTTTCTTCCGCC
CTTTCTACCCATCGTCATCCAGCACGTCTATTAATTGTGTCTGTGCTAGC
TGTTGATCCTTAGATGCAAGCTGGCCACGGGCTATGAGGCAGAGATGATG
CATGGCGCATGCACCGAGGAGATCAAACAACGCATCGCCATCCTAAGGTA
CTGGATGCGAATAGCACAAAACGCGGACACAAGTTAGAAAACCAGACACG
TTGCAGAAGAGAACAAAGAAAGCGATTGGTTCAAAATAAAATATTGTTGA
AAAAAAAGCTGCGACCATTGGACGCACCACGACTTCTTCTAGACCGCAAC
TGAGCGACACATCTAGTTTCACTTTTATTTCTTGTCTTCGGTGTACGATT
GGCTTCAGATAGGATTAAGTTTTATTTATTTATTTCCCCTGCGGTATTCT
TCCACTCCCGAGTTATCTAGGCCTGGGTTGTGACGGCGGACTAAATTTGT
TCGGGTAATCGGCATGCCCGATTTGTTTCCCCGAAAGCCGTTCAATTCAC
TACAGTATTGTGAAACTATTTGTTTGGGCGCCGGCATGCCCTGAGCTTTC
CCCCGAAAGTCGCTTGCGCCGTTTGCAGCCTTTTTCTGATACGCTATACT
GACAAGGCGTGGAGGGGGGTGAACCCCTGACTAGCCAGGGCTGTGAGTTG
GCTGAATATAAGTCGCCGACTGGTTGTCAGTTGGGTAGACTGACTTTGAG
TCGCCGGTTGATTATTAGTTGGCTATGCTGACTATGATTCGCCGACTGGT
ATTAGTTGGCTAGGCTGACTATGAGTCGATGACTAGTTGCTATTGGCTAG
GCTGACTAAAAGTGGGCGACTATTTTGAGTCGCTGACTAGTTATTAGTCG
GTTGGGCTGACTATGAGTCGCCGACCATGAATAGTTTTTTAGTTGGCTAG
GATGACTCTCTGTCCTAGAGTCACTGCACTGCACGGTCTCGCCGCAAAAG
TCAGCTGGGCTATTTGATGTTCACCTTGTTCAGGGTCGGTTGTCCAGATT
GCCAATCGGACACAAACCCCTTGAAACTGTTTGGAACAGCAAGAGCGACT
CCGAACGACCACGGAATAATCTCGTTCCATTCCAATCAGTCGAACCGGTC
TACCGGTAGTGAAGTTAAGACACATCTTGACTGCCCCCCGTACCCCCCCC
TGACCTGTACGTTTAACGTTGACTGTCAGCAGTTGGAATTCCGTCTTCGC
GGTGGGTCGCTGTTGCTGATGGAAGGGAGCACCCAGAAACACTGGCAGCA
CCGCGTACCGAAGAGAAATGCCGCGGAACTCAAAGAAGAGGAACACGCGC
GATCGAAAAAAAGCAGGCTGCCGGGTGCCTCCGAGAGCTCGATCCCGAGT
TTTTCGGACGTGCACCGTGAACCGTCGATCACATCACCCTCACGTCGTGA
TGGGCGCGGTAGTGAGCAGCCGAACGATGCGTCGTCATCGGGGAAAGGGG
GGGAAGAGGGGACGTTAGAGAGGGGTCGCGGAAGATGCAGCAGCGGCAAG
GGGGGGGTCCGGGGGGGGCGGGGGGGGGGCGAAGAGGCTTCTGATTGCGG
AAAATGGCCGACAGCAGGGAGGGTCAATCTGACATTTCGTCGCGTAGAGA
GCAACTCCTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6797:4555..8865+

>mRNA_M-pyrifera_M_contig6797.16395.1 ID=mRNA_M-pyrifera_M_contig6797.16395.1|Name=mRNA_M-pyrifera_M_contig6797.16395.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig6797:4555..8865+ (Macrocystis pyrifera P11B4 male)
ATGGGGTGGCATTCGGATGGGGTGGCATTCGGACAATGAGAAGGAGCTGG
AAAAGGGGGCGGCAATAGCGTCCGTTTCGCTGGGCTCGGAGCGACGGTTC
CAGCTGCGCCGAAAAACGGACAGCAAGCAAAAGACAATGAGAAGGAGCTG
GAAAAGGGGGCGGCAATAGCGTCCGTTTCGCTGGGCTCGGAGCGACGGTT
CCAGCTGCGCCGAAAAACGGACAGCAAGCAAAAGTTGGAATTCCGTCTTC
GCGGTGGGTCGCTGTTGCTGATGGAAGGGAGCACCCAGAAACACTGGCAG
CACCGCGTACCGAAGAGAAATGCCGCGGAACTCAAAGAAGAGGAACACGC
GCGATCGAAAAAAAGCAGGCTGCCGGTTGGAATTCCGTCTTCGCGGTGGG
TCGCTGTTGCTGATGGAAGGGAGCACCCAGAAACACTGGCAGCACCGCGT
ACCGAAGAGAAATGCCGCGGAACTCAAAGAAGAGGAACACGCGCGATCGA
AAAAAAGCAGGCTGCCGGTGAGCAGCCGAACGATGCGTCGTCATCGGGGA
AAGGGGGGGAAGAGGGGACGTTAGTGAGCAGCCGAACGATGCGTCGTCAT
CGGGGAAAGGGGGGGAAGAGGGGACGTTAG
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