prot_M-pyrifera_M_contig67936.16390.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67936.16390.1
Unique Nameprot_M-pyrifera_M_contig67936.16390.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length390
Homology
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A7K1Z7A8_9ACTN (Transcription termination factor Rho n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z7A8_9ACTN)

HSP 1 Score: 467 bits (1201), Expect = 1.630e-159
Identity = 235/377 (62.33%), Postives = 297/377 (78.78%), Query Frame = 0
Query:   12 GRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAYAQDAA--GNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKI 386
            GR+RE NK +++ W+G+ +PVAG+LELR EGYGFLRV+G LPSKDDAYVPVKMVR++ L KG HLSGTSRPA RNEKNPAM+E+ +VNGG PEA  +R  FD    V+P E +VFAG+QEP DPTAR++D+LTP G+GQRA++A  PR GKT +L+HL RS+E NH D+ELLVLL+DERPEDIT+MTRWV++GEVI + F+QP +EQIT+AEM IERAKR+VE GKDV ++VDG+TRLAR Y  +++  G  +   +D + VH  KRFLGAAR +EGGGSLT++ATI VDSD++ D AIYEELA TANLE+RLSRA A+RR+FP +DIG S T +EE L + AEL+  R+LRR L ++A         D+ ALL  I
Sbjct:  128 GRERENNKDTSDPWNGDVVPVAGYLELRPEGYGFLRVDGALPSKDDAYVPVKMVRQYNLDKGVHLSGTSRPAGRNEKNPAMVELLAVNGGPPEAATERVSFDEQVPVFPDERLVFAGSQEPEDPTARIVDMLTPLGRGQRALVASAPRAGKTTVLKHLVRSIEVNHTDVELLVLLVDERPEDITDMTRWVQRGEVIGSPFDQPTDEQITIAEMTIERAKRMVEDGKDVCLVVDGITRLARDYILESSHGGRSASGSIDRSVVHACKRFLGAARNIEGGGSLTVVATIVVDSDSSVDEAIYEELANTANLELRLSRALAVRRIFPAVDIGGSGTHNEEILLSPAELEQSRELRRRLMALASADDAAPGDDVLALLSDI 504          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A2E8LHP4_9ACTN (Transcription termination factor Rho n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LHP4_9ACTN)

HSP 1 Score: 391 bits (1004), Expect = 5.330e-129
Identity = 202/390 (51.79%), Postives = 280/390 (71.79%), Query Frame = 0
Query:    1 AESSGRKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            AE   R+RR  GR R+  +   E WDGEP+ V G L++R+EGYGFLR  G  PSK DAYV VK  R+FGLRKGDHL+G SRPANR+EKNPA++ I++VNGGKPE    R  F+ L  ++P E +    A +P++ TAR++DLL+P GKGQR ++  PP+ GKT +++ +ARS+E N+P+++L+VLL+DERPE++T+M RW+++GEV A+TF++P++E   +AE+ IERAKR+VESG+DVV+++DG+TRLARAY  A  A G      VD+  ++P KRF GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RRV+P ID+ ASST HEE L    +L+ V  LRR L  +A D     +A L+ L+D++ T
Sbjct:  155 AEPGNRRRRXXGRGRD--EGPEEAWDGEPVXVEGFLDMRDEGYGFLRTSGYKPSKADAYVSVKQARQFGLRKGDHLTGASRPANRSEKNPALLRIDTVNGGKPEDAKGRPRFEDLTPLFPDERLHLEVADDPSNMTARIVDLLSPIGKGQRGLIVSPPKAGKTTVMKQIARSIEINNPEVKLIVLLVDERPEEVTDMRRWLQRGEVAASTFDRPSDEHTHIAEITIERAKRMVESGEDVVIILDGITRLARAYNLAAPATGRIMSGGVDSGALYPPKRFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRVYPAIDVNASSTRHEELLFERKQLNQVWKLRRVLNGLASDEGNSGAAGLELLIDRLKT 542          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A2E0ZUV1_9ACTN (Transcription termination factor Rho (Fragment) n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0ZUV1_9ACTN)

HSP 1 Score: 384 bits (987), Expect = 4.020e-128
Identity = 200/389 (51.41%), Postives = 276/389 (70.95%), Query Frame = 0
Query:    2 ESSGRKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            ES  R+RRRRGR +  +    EQWDGEP+ V G+L++R+EGYGFLR     PSK DAYV VK   ++GLRKGDHL+G SRPANR+E+NPA++ I++VNGGKPE    R  F+ L  ++P E +      +P + TAR++DLL P GKGQR +L  PP+ GKT IL+ +ARS+E N+P+++L+VLL+DERPE++T+M RW++  EV A+TF++P++E   +AE+ IERAKR+VESG DVV+L+DG+TRL+RAY  A  A G      +D+ +++P KRF GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RRV+P ID+ ASST HEE L    +L+ V  LRR L  +A D     +A L+ L+D++ T
Sbjct:   33 ESGNRRRRRRGRGQ--SDGPEEQWDGEPVEVEGYLDMRDEGYGFLRTNNYKPSKADAYVSVKQAHQYGLRKGDHLTGASRPANRSERNPALLRIDTVNGGKPEDAKGRPRFEDLTPLFPDEHLKMETPDDPTNMTARIVDLLCPIGKGQRGLLVSPPKAGKTTILKQIARSIEVNNPEVKLIVLLVDERPEEVTDMRRWLKHSEVAASTFDRPSDEHTRIAEITIERAKRMVESGHDVVILLDGITRLSRAYNLAAPATGRIMSGGLDSGSLYPPKRFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRVYPAIDVNASSTRHEELLFQRNQLNQVWKLRRVLNGLAGDDGNSGAAGLELLIDRLKT 419          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A355DF71_9ACTN (Transcription termination factor Rho (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355DF71_9ACTN)

HSP 1 Score: 383 bits (984), Expect = 6.540e-128
Identity = 199/390 (51.03%), Postives = 276/390 (70.77%), Query Frame = 0
Query:    1 AESSGRKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            AE   R+RRR GR RE ++A +E WDGEP+ V G+L+LR+EGYGFLR  G  PS DDAYV VK VR+  LRKGDHL+G SRPANR+EKNPA++ I++VN   PE    R  F+ L  ++P E +      + A+ TAR++DL++P GKGQR ++  PP+ GKT I++ +ARS+E NHP++ L+VLL+DERPE++T+M RW++ GEV+ +TF++P+ E   +AE+ IERAKRLVE G DVV+++DG+TRL+RAY  A  A G      +D   ++P K+F GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RRV+P ID+ ASST HEE L    +L+ V  LRR L  +A+D  + A+A L+ L+D++ T
Sbjct:   12 AEPGNRRRRRSGRGRERDQAPDEAWDGEPVAVEGYLDLRDEGYGFLRANGFKPSADDAYVSVKQVRQLSLRKGDHLTGVSRPANRSEKNPALLRIDTVNTRPPEDAKKRPHFEDLTPLFPDEKLRLEVEGDSANMTARIVDLISPIGKGQRGLIVSPPKAGKTTIMKTIARSIEMNHPEVTLMVLLVDERPEEVTDMRRWLKSGEVMGSTFDRPSSEHTQLAEITIERAKRLVEYGADVVIILDGITRLSRAYNLAAPATGRIMSGGIDTGALYPPKKFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRVYPAIDVNASSTRHEELLFERKQLNQVWKLRRVLNGLANDGDSSAAASLELLIDRLKT 401          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A2E4AVW7_9ACTN (Transcription termination factor Rho n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E4AVW7_9ACTN)

HSP 1 Score: 387 bits (994), Expect = 1.150e-127
Identity = 197/373 (52.82%), Postives = 273/373 (73.19%), Query Frame = 0
Query:   18 NKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            ++AS E WDGEP+PV G+++LR+EGYGFLR  G  PSK DAY+ VK VR+  LRKGD+L G SRP NR+EKNPA++ I++VNGG PE + DR  F+ L  ++P E +    + +P + TAR+IDLL+P GKGQR ++  PP+ GKT I++ +ARS+ETN+P+++L+VLL+DERPE++T+M RW+E GEV A+TF++P+EE   +AE+ IERAKR+VESG+DVV+++DG+TRL+RAY  A  A G      VD+  ++P KRF GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RR++P ID+ ASST HEE L    +L+ V  LRR L  +A D T  A+A L+ L D++ T
Sbjct:  157 DQASEEPWDGEPVPVEGYVDLRDEGYGFLRTTGFKPSKTDAYISVKQVRQLNLRKGDYLVGGSRPPNRSEKNPALLRIDTVNGGDPEGIKDRPKFEDLTPLFPDEKLSMEISDDPGNMTARIIDLLSPIGKGQRGLIVSPPKAGKTTIMKQIARSIETNNPEVKLIVLLVDERPEEVTDMQRWLENGEVAASTFDRPSEEHTQIAELTIERAKRMVESGEDVVIILDGITRLSRAYNLAAPATGRIMSGGVDSGALYPPKRFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRIYPAIDVDASSTRHEELLFERKQLNQVWKLRRVLNGLATD-TGGAAAGLELLTDRLKT 528          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A7X5WUQ8_9ACTN (Transcription termination factor Rho (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WUQ8_9ACTN)

HSP 1 Score: 374 bits (961), Expect = 1.070e-126
Identity = 178/248 (71.77%), Postives = 216/248 (87.10%), Query Frame = 0
Query:    6 RKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY 253
            R+RRRRGR+RE N+ +NE WDGEPIPVAGHLELR+EGYGFLRV+G LPSKDDAYVPVKMVR+FGLR+GDHL+G SRPANRNEKNPAM+E+ +VNGG PEA  DR DFD L +V+P+E IV AG Q P DPTARVIDLLTP GKGQRA++A PPRTG+T +L+H+ R+LE NHP+++L V+LLDERPED+T+M  WV KGEV A+ F++P EEQ TVAEM +ERAKR+VE G+DVV+++DG+TRLARAY
Sbjct:    2 RRRRRRGRERENNRDTNEAWDGEPIPVAGHLELRSEGYGFLRVDGALPSKDDAYVPVKMVRQFGLRRGDHLTGASRPANRNEKNPAMVEVATVNGGPPEAAVDRPDFDGLVSVFPNERIVLAGDQAPEDPTARVIDLLTPIGKGQRALVAAPPRTGETTLLKHVIRALEHNHPELDLFVVLLDERPEDVTDMQEWVTKGEVAASAFDRPTEEQTTVAEMTMERAKRMVEDGRDVVVVLDGITRLARAY 249          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A3M2H4F5_ACTSX (Transcription termination factor Rho n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H4F5_ACTSX)

HSP 1 Score: 386 bits (991), Expect = 1.160e-126
Identity = 193/363 (53.17%), Postives = 270/363 (74.38%), Query Frame = 0
Query:   28 EPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            EP+PVAG+LELR+EGYGF+R +G LPSK+DAYVPVKMVR++GLRKGDH++GTSRPA R EKNPA++ IESVNG  P+   +R  F+ L  ++P E +V     +P + TAR+IDL+ P GKGQR ++  PP+ GKT +++++ARS+ETN+P++ ++VLL+DERPE++T+M RW+++GEV+A+TF++P++E   VAEM IERAKR+VE GKDV +++DG+TRLARAY  A  A G      +D   ++P K+F GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R AA RR++P ID+ ASST HEE L    +L  V  LRR L+ +A D  + A  +L  L+D++ T
Sbjct:  211 EPVPVAGYLELRDEGYGFVRTKGYLPSKEDAYVPVKMVRQYGLRKGDHITGTSRPAGRKEKNPALLTIESVNGDDPDKARNRPRFEDLTPLFPDEKLVQEMPDDPMNMTARIIDLIAPIGKGQRGLIVSPPKAGKTTVMKNIARSIETNNPEVHVIVLLVDERPEEVTDMRRWLQRGEVVASTFDRPSDEHTLVAEMTIERAKRMVEYGKDVCIILDGITRLARAYNLAAPATGRIMSGGIDTGALYPPKKFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRAAERRIYPAIDVDASSTRHEELLFERKQLQQVWKLRRVLSGLASDGGSGAGLEL--LIDRLKT 571          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A2E5NU50_9ACTN (Transcription termination factor Rho n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NU50_9ACTN)

HSP 1 Score: 384 bits (986), Expect = 1.800e-126
Identity = 197/379 (51.98%), Postives = 271/379 (71.50%), Query Frame = 0
Query:   12 GRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            GRDR+      + WDGEP+ V G+L+LR EGYGFLR  G  PSK DAYV VK VR+FGLR+GDHL G SRPANR+EKNPA++ I+ VNG  PE   DR  F+ L  ++P E +      +P D TAR+IDLL+P GKGQR ++  PP+ GKT I++ + RS+ETNHP+++L+VLL+DERPE++T+M RW+++GEV+ +TF++P++E   +AE+ IERAKR+VE G+DVV+++DG+TRL+RAY  A  A G      VD+  ++P KRF GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RR++P ID+ ASST HEE L    +L+ V  LRR L  +A+D    A+A L+ L+D++ T
Sbjct:  151 GRDRDHG--PEDPWDGEPVDVVGYLDLRVEGYGFLRTVGFKPSKKDAYVSVKQVRQFGLRRGDHLVGASRPANRSEKNPALLRIDQVNGRDPEQAKDRPRFEDLTPLFPDEKLRMEIDGDPTDMTARIIDLLSPVGKGQRGMIVSPPKAGKTTIMKSIVRSIETNHPEVKLIVLLVDERPEEVTDMRRWLQRGEVVGSTFDRPSDEHTQLAEVTIERAKRMVEYGEDVVIMLDGITRLSRAYNLAAPATGRIMSGGVDSGALYPPKRFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRIYPAIDVNASSTRHEELLFERKQLNQVWKLRRVLNGLANDGDASAAAGLELLIDRLKT 527          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A2E8NAQ5_9ACTN (Transcription termination factor Rho n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8NAQ5_9ACTN)

HSP 1 Score: 383 bits (983), Expect = 6.290e-126
Identity = 199/390 (51.03%), Postives = 275/390 (70.51%), Query Frame = 0
Query:    1 AESSGRKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKIAT 388
            AE   R+RRRRGRD +      E WDGEP+ V G+L+LR+EGYGFLR  G  PSK DAYV VK VR+ GLR+GDHL G SRPANR+EK PA++ I+ VN   PE   DR  F+ L  ++P E +      +P + TAR+IDLL+P GKGQR ++  PP+ GKT I++ + RS+ETNHP+++L+VLL+DERPE++T+M RW+++GEV+ +TF++P++E   +AE+ IERAKR+VE G+DVV+++DG+TRL+RAY  A  A G      VD+  ++P KRF GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R  A RR++P ID+  SST HEE L    +L+ V  LRR L  +A+D    A+A L+ L+D++ T
Sbjct:  147 AEPGNRRRRRRGRDHDQR--PEEPWDGEPVDVEGYLDLRDEGYGFLRTSGFKPSKKDAYVSVKQVRQLGLRRGDHLVGASRPANRSEKXPALLRIDKVNDRDPEQAKDRPRFEDLTPLFPDEKLRMEVDGDPTNMTARIIDLLSPVGKGQRGMIVSPPKAGKTTIMKSIVRSIETNHPEVKLIVLLVDERPEEVTDMXRWLQRGEVVGSTFDRPSDEHTALAEVTIERAKRMVEYGEDVVIVLDGITRLSRAYNLAAPATGRIMSGGVDSGALYPPKRFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRIAERRIYPAIDVNGSSTRHEELLFERKQLNQVWKLRRVLNGLANDGDAAAAAGLELLIDRLKT 534          
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Match: A0A520Y2W0_9ACTN (Transcription termination factor Rho n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y2W0_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 9.450e-126
Identity = 199/366 (54.37%), Postives = 262/366 (71.58%), Query Frame = 0
Query:   23 EQWDGEPIPVAGHLELRNEGYGFLRVEGPLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNGGKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQRAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRWVEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLARAY--AQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDSDAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRTDAELDTVRDLRRELASIADDPTTEASADLQALLDKI 386
            E WDGEP+ V G L+LR++GYGFLRV G   +KDDAYV VK VR+ GLRKGDHL GTSRPANRNEKNPAM+ I SVNG   E   DR  FD L  ++P E +V     EP + TAR+IDLL P GKGQR ++  PP+ GKT I++++ RS+ETN+PD+ L+VLL+DERPE++T+M RW+  GEV A+TF++PA+E   +AE+ IERAKR+VESG+DVV+++DG+TRLARAY  A  A G      VD+  ++P K+F GAAR +E GGSLT+LAT  V++ +  D  I+EE  GT N+E+RL R +A RR++P ID+ ASST  EE L    +LD V  LRR L+ +A D      A L+ L+D++
Sbjct:  137 ESWDGEPVNVEGFLDLRDDGYGFLRVGGFKGTKDDAYVSVKQVRQHGLRKGDHLVGTSRPANRNEKNPAMLTIASVNGDDAEKAKDRPRFDDLTPLFPDEKLVQEMPGEPDNMTARIIDLLCPIGKGQRGLIVSPPKAGKTTIMKNITRSIETNNPDVHLIVLLVDERPEEVTDMKRWLLNGEVAASTFDRPADEHTALAEITIERAKRMVESGRDVVIILDGITRLARAYNLAAPATGRVMSGGVDSGALYPPKKFFGAARNVEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLDRRSAERRIYPAIDVDASSTRQEELLFEPKQLDQVWKLRRVLSGMAGDGDKGPGAGLELLMDRL 502          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67936.16390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1Z7A8_9ACTN1.630e-15962.33Transcription termination factor Rho n=2 Tax=Acidi... [more]
A0A2E8LHP4_9ACTN5.330e-12951.79Transcription termination factor Rho n=2 Tax=Acidi... [more]
A0A2E0ZUV1_9ACTN4.020e-12851.41Transcription termination factor Rho (Fragment) n=... [more]
A0A355DF71_9ACTN6.540e-12851.03Transcription termination factor Rho (Fragment) n=... [more]
A0A2E4AVW7_9ACTN1.150e-12752.82Transcription termination factor Rho n=3 Tax=Actin... [more]
A0A7X5WUQ8_9ACTN1.070e-12671.77Transcription termination factor Rho (Fragment) n=... [more]
A0A3M2H4F5_ACTSX1.160e-12653.17Transcription termination factor Rho n=1 Tax=Actin... [more]
A0A2E5NU50_9ACTN1.800e-12651.98Transcription termination factor Rho n=3 Tax=Acidi... [more]
A0A2E8NAQ5_9ACTN6.290e-12651.03Transcription termination factor Rho n=2 Tax=Acidi... [more]
A0A520Y2W0_9ACTN9.450e-12654.37Transcription termination factor Rho n=1 Tax=Acidi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 148..332
e-value: 9.9E-6
score: 35.0
IPR011129Cold shock domainSMARTSM00357csp_8coord: 33..97
e-value: 2.3E-5
score: 33.9
NoneNo IPR availableGENE3D3.40.50.300coord: 109..388
e-value: 2.4E-79
score: 268.4
NoneNo IPR availableGENE3D2.40.50.140coord: 1..107
e-value: 7.1E-25
score: 89.2
NoneNo IPR availablePROSITEPS51856RHO_RNA_BDcoord: 29..102
score: 24.987
IPR011113Rho termination factor, RNA-binding domainPFAMPF07497Rho_RNA_bindcoord: 32..104
e-value: 1.6E-22
score: 79.1
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 138..340
e-value: 5.2E-20
score: 72.0
IPR004665Transcription termination factor RhoPANTHERPTHR46425FAMILY NOT NAMEDcoord: 23..370
IPR004665Transcription termination factor RhoHAMAPMF_01884Rhocoord: 1..389
score: 117.76
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 97..346
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 31..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67936contigM-pyrifera_M_contig67936:81..1250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67936.16390.1mRNA_M-pyrifera_M_contig67936.16390.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67936 81..1250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67936.16390.1 ID=prot_M-pyrifera_M_contig67936.16390.1|Name=mRNA_M-pyrifera_M_contig67936.16390.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=390bp
AESSGRKRRRRGRDREANKASNEQWDGEPIPVAGHLELRNEGYGFLRVEG
PLPSKDDAYVPVKMVREFGLRKGDHLSGTSRPANRNEKNPAMIEIESVNG
GKPEAVADRTDFDALPAVYPSEPIVFAGAQEPADPTARVIDLLTPFGKGQ
RAVLAGPPRTGKTAILQHLARSLETNHPDIELLVLLLDERPEDITEMTRW
VEKGEVIAATFEQPAEEQITVAEMVIERAKRLVESGKDVVMLVDGVTRLA
RAYAQDAAGNRSGVVVDATTVHPAKRFLGAARCLEGGGSLTMLATITVDS
DAAADAAIYEELAGTANLEIRLSRAAAIRRVFPPIDIGASSTVHEERLRT
DAELDTVRDLRRELASIADDPTTEASADLQALLDKIATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011129CSD
IPR011113Rho_RNA-bd
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR004665Term_rho
IPR027417P-loop_NTPase
IPR012340NA-bd_OB-fold