prot_M-pyrifera_M_contig67914.16387.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67914.16387.1
Unique Nameprot_M-pyrifera_M_contig67914.16387.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67914.16387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..116
e-value: 6.8E-17
score: 63.5
IPR000225ArmadilloPFAMPF00514Armcoord: 37..72
e-value: 1.6E-4
score: 21.6
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 6..48
score: 9.572
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67914contigM-pyrifera_M_contig67914:726..1073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67914.16387.1mRNA_M-pyrifera_M_contig67914.16387.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67914 726..1073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67914.16387.1 ID=prot_M-pyrifera_M_contig67914.16387.1|Name=mRNA_M-pyrifera_M_contig67914.16387.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
TLRREGGVTSLVGLLASTELNILEITLSILTDFADSDSNAELVCDEKGLP
MVLELLAHKDERIALRALTALQGMIGVDAVRTELLKSGGIGHIVRQLPST
NSVMRKSAIAVVSCLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR000225Armadillo
IPR016024ARM-type_fold