prot_M-pyrifera_M_contig6791.16383.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6791.16383.1
Unique Nameprot_M-pyrifera_M_contig6791.16383.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length62
Homology
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BLAST of mRNA_M-pyrifera_M_contig6791.16383.1 vs. uniprot
Match: D7G1P0_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P0_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 2.270e-13
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:   31 QSVCFNNCSGRGRCVDYACECDVGYDGDDCSF 62
            QSVCFNNCSGRGRC+DY CECD GYDGDDCSF
Sbjct:   38 QSVCFNNCSGRGRCIDYTCECDAGYDGDDCSF 69
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BLAST of mRNA_M-pyrifera_M_contig6791.16383.1 vs. uniprot
Match: A0A6H5LBD4_9PHAE (EGF-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBD4_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.090e-12
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 0 
Query:   31 QSVCFNNCSGRGRCVDYACECDVGYDGDDCSF 62
            QSVCFNNCSG GRC+DY CECD GYDGDDCSF
Sbjct:   40 QSVCFNNCSGHGRCIDYTCECDAGYDGDDCSF 71
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BLAST of mRNA_M-pyrifera_M_contig6791.16383.1 vs. uniprot
Match: A0A7S2RV49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV49_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.180e-8
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:   25 EEVNNTQSVCFNNCSGRGRCVDYACECDVGYDGDDCSF 62
            E V++  SVCFN+CSG G CVD++CEC +GY GDDC +
Sbjct:   38 ESVDSGGSVCFNDCSGHGHCVDFSCECFLGYFGDDCRY 75
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6791.16383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1P0_ECTSI2.270e-1390.63EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5LBD4_9PHAE1.090e-1287.50EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2RV49_9STRA8.180e-860.53Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.25.10coord: 33..62
e-value: 7.5E-7
score: 30.6
IPR000742EGF-like domainPFAMPF00008EGFcoord: 34..58
e-value: 3.6E-5
score: 24.0
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 49..60
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 49..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6791contigM-pyrifera_M_contig6791:8774..8959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6791.16383.1mRNA_M-pyrifera_M_contig6791.16383.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6791 8774..8959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6791.16383.1 ID=prot_M-pyrifera_M_contig6791.16383.1|Name=mRNA_M-pyrifera_M_contig6791.16383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp
MRDHSYIFSNLDPSAGSLEGTVSPEEVNNTQSVCFNNCSGRGRCVDYACE
CDVGYDGDDCSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR013032EGF-like_CS