mRNA_M-pyrifera_M_contig679.16381.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig679.16381.1
Unique NamemRNA_M-pyrifera_M_contig679.16381.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: D8LAV3_ECTSI (Methylase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV3_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.130e-96
Identity = 240/406 (59.11%), Postives = 276/406 (67.98%), Query Frame = 1 
Query:    1 RPFQACAIMAFMAFPSKAFLPTPPASCLLRHAR-VASTSSNSSSIKAR------ARRTSTSLSAS--DSAKXXXXXXXXXXXXXXXXXXXXXXXTVAGAGEVQATXXXXXXXXXXAMDSLRRGGGGFGGEGNGGAQDLFASRQDVSSQARSAVEAALAAIAEAETAGPPTEASTA--AYDAVGMAQAALDRRYAAASDVGAASDASQGEDGAAAGQAXXXXXXXXXXXXXXXXSSDVLQDEAEMTKEPESARMTRDNPAASHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            +  QAC  MAF+  PS AFLP   ++ ++RH R  AS SS S+S + R      ++R+  SLSA+  D AK      XXXXXXXXXXXXXXXXX           XXXXXXXXXX M+SLRR  G FGG   GG  D    + +V+SQARSAV                        A DA+GM QAALDRR +A  ++GA S     ED   A +                  SD  ++  + TKEPESAR +R+NPAASHSHM+HLLWRQVAGPGDTVLDCTAGNG+DSLE+AKIVAL DGVG LYVMD  ERA+EATR RLRSELGE+ALKRSTLI+GNFR MPAELEP+SVQLVVYNLGWLPGGDKSITT+LEDTLESIEAA+R+VK GGMISVMLYRGHAE
Sbjct:   18 KTLQACVAMAFLISPSTAFLPAISSAVIVRHIRRTASASSISASHRKREATITASQRSLVSLSAAGTDGAKDAAVRAXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXMESLRRDPGTFGG---GGLGDEAVQQDEVTSQARSAVXXXXXXXXXXXXXXXXXXXXXXXXAQDAIGMVQAALDRRDSATVELGAESS----EDTPVAAETAVLTSRGDGSV------SDGGEEGGDGTKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYVMDVQERAIEATRERLRSELGELALKRSTLINGNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTKLEDTLESIEAAKRVVKHGGMISVMLYRGHAE 409
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A6H5JPN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN0_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.320e-94
Identity = 240/432 (55.56%), Postives = 277/432 (64.12%), Query Frame = 1 
Query:   25 MAFMAFPSKAFLPTPPASCLLRHAR-VASTSSNSSSIKAR------ARRTSTSLSA--SDSAKXXXXXXXXXXXXXXXXXXXXXXXTVAGAGEVQATXXXXXXXXXXAMDSLRRGGGGFGGEGNG--------------------------------GAQDLFASRQ----DVSSQARSAVEAALAAIAEAETAGPPTEASTA--AYDAVGMAQAALDRRYAAASDVGAASDASQGEDGAAAGQAXXXXXXXXXXXXXXXXSSDVLQDEAEMTKEPESARMTRDNPAASHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMDERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            MAF+  PS  FLP   ++ ++RH R  AST S S S + R      ++R+  SLSA  SD AK XXXXXXXXXXXXXXXXXXXXXX      EVQ T     XX   AM+SLRR  G FGG G G                                G Q+ +  +     +V+SQARSAV+A                      A DA+GM QAALDRR +AA ++GA S     ED   A +A                +S   ++  + TKEPESAR +R+NPAASHSHM+HLLWRQVAGPGDTVLDCTAGNG+DSLE+AKIVAL DGVG LY+MDERA+EATR RLRSELGE+ALKRSTLI+ NFR MPAELEP+SVQLVVYNLGWLPGGDKSITT LEDTLESIEAA+R+VK GGMISVMLYRGHAE
Sbjct:    1 MAFLISPSTPFLPAISSTSIVRHVRRTASTLSISVSHRRREATITASQRSLVSLSAAGSDGAKDXXXXXXXXXXXXXXXXXXXXXXXXX-RDEVQVTIAAARXXARSAMESLRRDPGTFGGGGLGDEAVQQASCALAYFLIVVLPVDQVEQSDLDVVGIQETWELKDGDVDEVTSQARSAVQAXXXXXXXXXXXXXXXXXXXXXXAQDAIGMVQAALDRRDSAAVELGAKSS----EDTQVAAEAAVL-------------TSRGGEESGDGTKEPESARWSRNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIVALKDGVGSLYIMDERAIEATRERLRSELGELALKRSTLINSNFREMPAELEPLSVQLVVYNLGWLPGGDKSITTTLEDTLESIEAAKRVVKHGGMISVMLYRGHAE 414
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: D6YVK4_WADCW (Putative rRNA methylase n=2 Tax=Waddlia chondrophila TaxID=71667 RepID=D6YVK4_WADCW)

HSP 1 Score: 122 bits (306), Expect = 2.420e-29
Identity = 63/146 (43.15%), Postives = 93/146 (63.70%), Query Frame = 1 
Query:  748 SHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            SH  ++H  W+ +  PGD V+D T GNG+D+L +A++ AL    GKLY  D  + A+ +T+  L  +L +  ++R   +HG     P E++P SV+L  YNLG+LPGGDK+ TT+ E TL+SI+ A   V+ GGM+S+  Y GH E
Sbjct:   10 SHIDLAHKHWKSLVKPGDIVIDATCGNGHDTLVLAQL-ALTVESGKLYACDLQKDAINSTKQSLLEKLEKKIVERIFFVHGCHSSFPDEIQPNSVRLAAYNLGYLPGGDKAKTTQTETTLQSIQKALEAVQDGGMVSITCYPGHTE 154
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A836C882_9STRA (Putative rRNA methylase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C882_9STRA)

HSP 1 Score: 121 bits (303), Expect = 6.220e-29
Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 1 
Query:  760 MSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIV---------ALGDGVGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEP----MSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            ++HLLW+    PGD V+DCTAG GYDSL +A+++         A     G+L  +D  E A+  T+ARL+  L   A++R +++  +F  +P   EP     SV LV YNLG+LPG DKS+ + ++DTL+S+  A +LVK GG ISV  Y GH E
Sbjct:    2 LAHLLWKSAVSPGDIVIDCTAGKGYDSLVLARLLFPDSALDGEAAAAAQGQLVCIDVQESAVAQTQARLQQALPPQAMQRISVLQQSFCELPPACEPPIAERSVALVAYNLGFLPGSDKSVCSTVQDTLDSLNKASKLVKLGGAISVTCYPGHEE 156
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A0G4GWR6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWR6_VITBC)

HSP 1 Score: 120 bits (301), Expect = 1.310e-28
Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 1 
Query:  736 NPAASHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDG----VGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            +P ASH  +S LLW+Q   PG   +D T GNG DSL ++ ++   DG      +L  +D    A+ +TR+ L  EL    L+R  L H +    P  +   SV ++VYNLG+LPGGDKS+TT  + T+ S+ AA +L+  GG+ISVMLYRGH E
Sbjct:   10 SPLASHLPLSRLLWKQGLKPGGRAVDATCGNGKDSLFLSTLIFPSDGDDETEAELICIDVQREAIGSTRSLLAEELRPPHLERIRLFHQSHERFPDCIADNSVDVIVYNLGYLPGGDKSVTTRHDTTITSLTAALKLIVKGGLISVMLYRGHPE 163
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A5C7WT25_9PROT (Methyltransferase domain-containing protein n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7WT25_9PROT)

HSP 1 Score: 119 bits (297), Expect = 3.990e-28
Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 1 
Query:  748 SHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            SH  ++H  W+Q+   GDTV+D T GNG+D+L +A++V + D  G +Y +D    A++ +R  L  EL    L+R  L+       P  +   SV+L+VYNLG+LPGG+KS+TT +E TL+S+ AA +L+  GG +S+ LY GH E
Sbjct:    9 SHLDLAHTYWKQLVSIGDTVIDATCGNGHDTLMLARLV-IDDSAGDVYGLDIQSTAIDNSRQLLHQELPTHHLQRIHLLQQCHSTFPDMITAASVKLIVYNLGYLPGGNKSLTTRVETTLQSLNAAVKLLSPGGCLSITLYPGHPE 153
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A6J1J6K5_CUCMA (uncharacterized protein LOC111483929 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1J6K5_CUCMA)

HSP 1 Score: 119 bits (297), Expect = 2.250e-27
Identity = 65/145 (44.83%), Postives = 97/145 (66.90%), Query Frame = 1 
Query:  754 SHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIA---LKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGH 1173
            + ++H +W++V   GDTV+D T GNGYD+L M K+VA   G  ++Y MD  + ALE+T A L   L E     +K S++ H     +  E  P  V+LV +NLG+LPGG+K+ITT+ E TL+++EAA R++K GG+IS+++Y GH
Sbjct:   81 TEVAHSVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSP--VRLVAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGH 223
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A6J1D7G1_MOMCH (uncharacterized protein LOC111017978 isoform X1 n=2 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D7G1_MOMCH)

HSP 1 Score: 117 bits (294), Expect = 5.760e-27
Identity = 64/145 (44.14%), Postives = 95/145 (65.52%), Query Frame = 1 
Query:  754 SHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIA---LKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGH 1173
            + ++H +W+ +   GDTV+D T+GNGYD+L M K+VA   G G +Y MD  + AL  T A L   L E     +K S++ H     +  E  P  V+LV +NLG+LPGG+K+ITT+ E TL+++EAA R++K GG+IS+++Y GH
Sbjct:   79 TEVAHSVWKHIIRRGDTVVDATSGNGYDTLAMVKMVADESGSGCVYAMDVQKEALAKTSALLEESLDEQEKKLVKLSSICHSRMEDVIPEGSP--VRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGH 221
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BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A7W1GVU4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1GVU4_9BACT)

HSP 1 Score: 115 bits (289), Expect = 5.810e-27
Identity = 57/144 (39.58%), Postives = 92/144 (63.89%), Query Frame = 1 
Query:  748 SHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMD--ERALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGH 1173
            SH  ++H  W+++   GD+V+D T GNG D+L +A++  L +G G +Y MD  ++AL++ R  L   L          I G     P E++P++++L+VYNLG+LPGGDK  TT++E TL+S+E+A+ L+  GG++ +  Y GH
Sbjct:   10 SHLDLTHQYWKKLIQQGDSVIDATCGNGKDTLCLAQLT-LAEGKGIIYAMDIQKQALDSARHYLSMHLSPQQFLDIEFILGCHSQFPVEIKPLTIKLIVYNLGYLPGGDKKQTTQMESTLKSLESAKNLIAPGGVLCITCYPGH 152
[Close]
BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Match: A0A0U5JHE0_9BACT (Putative rRNA methylase n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5JHE0_9BACT)

HSP 1 Score: 115 bits (289), Expect = 5.970e-27
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 1 
Query:  748 SHSHMSHLLWRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMDER--ALEATRARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKSITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE 1179
            SH  ++H  W ++  PGD  +D T GNG+D+L++ ++ AL    G++Y +D +  A+E T+A L   L    ++   LI G     PA + P S++L+VYNLG+LPGGDK+ TTE   TL S++ A  LV  GG ISV  Y GH E
Sbjct:   10 SHLDLAHHYWSKLLKPGDRAIDATCGNGHDTLKLCQL-ALCQSEGEIYALDRQSEAIENTKAYLNQNLLPSQIEHIHLILGCHSQFPASITPTSIKLIVYNLGYLPGGDKAETTETSTTLLSLQEALNLVVPGGAISVTCYPGHLE 154
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig679.16381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV3_ECTSI1.130e-9659.11Methylase-related n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JPN0_9PHAE3.320e-9455.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D6YVK4_WADCW2.420e-2943.15Putative rRNA methylase n=2 Tax=Waddlia chondrophi... [more]
A0A836C882_9STRA6.220e-2943.23Putative rRNA methylase-domain-containing protein ... [more]
A0A0G4GWR6_VITBC1.310e-2843.51Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A5C7WT25_9PROT3.990e-2842.47Methyltransferase domain-containing protein n=1 Ta... [more]
A0A6J1J6K5_CUCMA2.250e-2744.83uncharacterized protein LOC111483929 n=3 Tax=Cucur... [more]
A0A6J1D7G1_MOMCH5.760e-2744.14uncharacterized protein LOC111017978 isoform X1 n=... [more]
A0A7W1GVU4_9BACT5.810e-2739.58Class I SAM-dependent methyltransferase n=1 Tax=Pa... [more]
A0A0U5JHE0_9BACT5.970e-2742.47Putative rRNA methylase n=1 Tax=Candidatus Protoch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig679contigM-pyrifera_M_contig679:28397..31355 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue1.8e-79
Seed eggNOG ortholog2880.D8LAV3
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Putative rRNA methylase
EggNOG OGs2QQ3B@2759,COG0500@1
Ec32 ortholog descriptionmethylase-related
Ec32 orthologEc-27_006280.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1179
Cds size1155
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.2214143-UTR-M-pyrifera_M_contig679:28396..284201622816570.2214143-UTR-M-pyrifera_M_contig679:28396..28420Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig679 28397..28420 +
1692278052.8298633-UTR-M-pyrifera_M_contig679:28396..284201692278052.8298633-UTR-M-pyrifera_M_contig679:28396..28420Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig679 28397..28420 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.2356522-CDS-M-pyrifera_M_contig679:28420..285061622816570.2356522-CDS-M-pyrifera_M_contig679:28420..28506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 28421..28506 +
1692278052.843513-CDS-M-pyrifera_M_contig679:28420..285061692278052.843513-CDS-M-pyrifera_M_contig679:28420..28506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 28421..28506 +
1622816570.2520182-CDS-M-pyrifera_M_contig679:28596..288881622816570.2520182-CDS-M-pyrifera_M_contig679:28596..28888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 28597..28888 +
1692278052.8570414-CDS-M-pyrifera_M_contig679:28596..288881692278052.8570414-CDS-M-pyrifera_M_contig679:28596..28888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 28597..28888 +
1622816570.2656538-CDS-M-pyrifera_M_contig679:29336..297101622816570.2656538-CDS-M-pyrifera_M_contig679:29336..29710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 29337..29710 +
1692278052.8708105-CDS-M-pyrifera_M_contig679:29336..297101692278052.8708105-CDS-M-pyrifera_M_contig679:29336..29710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 29337..29710 +
1622816570.2767267-CDS-M-pyrifera_M_contig679:30252..303761622816570.2767267-CDS-M-pyrifera_M_contig679:30252..30376Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 30253..30376 +
1692278052.8795671-CDS-M-pyrifera_M_contig679:30252..303761692278052.8795671-CDS-M-pyrifera_M_contig679:30252..30376Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 30253..30376 +
1622816570.2876494-CDS-M-pyrifera_M_contig679:30838..309751622816570.2876494-CDS-M-pyrifera_M_contig679:30838..30975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 30839..30975 +
1692278052.8886652-CDS-M-pyrifera_M_contig679:30838..309751692278052.8886652-CDS-M-pyrifera_M_contig679:30838..30975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 30839..30975 +
1622816570.2983816-CDS-M-pyrifera_M_contig679:31213..313551622816570.2983816-CDS-M-pyrifera_M_contig679:31213..31355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 31214..31355 +
1692278052.8981776-CDS-M-pyrifera_M_contig679:31213..313551692278052.8981776-CDS-M-pyrifera_M_contig679:31213..31355Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig679 31214..31355 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig679.16381.1prot_M-pyrifera_M_contig679.16381.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig679 28421..31355 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig679.16381.1

>prot_M-pyrifera_M_contig679.16381.1 ID=prot_M-pyrifera_M_contig679.16381.1|Name=mRNA_M-pyrifera_M_contig679.16381.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=385bp
MAFMAFPSKAFLPTPPASCLLRHARVASTSSNSSSIKARARRTSTSLSAS
DSAKDAAMAAVQAAEDALNVAAEDAGETVAGAGEVQATVAAARAAARSAM
DSLRRGGGGFGGEGNGGAQDLFASRQDVSSQARSAVEAALAAIAEAETAG
PPTEASTAAYDAVGMAQAALDRRYAAASDVGAASDASQGEDGAAAGQAAG
GVGGSSGSGSSGSGSSDVLQDEAEMTKEPESARMTRDNPAASHSHMSHLL
WRQVAGPGDTVLDCTAGNGYDSLEMAKIVALGDGVGKLYVMDERALEATR
ARLRSELGEIALKRSTLIHGNFRHMPAELEPMSVQLVVYNLGWLPGGDKS
ITTELEDTLESIEAARRLVKSGGMISVMLYRGHAE
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mRNA from alignment at M-pyrifera_M_contig679:28397..31355+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig679.16381.1 ID=mRNA_M-pyrifera_M_contig679.16381.1|Name=mRNA_M-pyrifera_M_contig679.16381.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2959bp|location=Sequence derived from alignment at M-pyrifera_M_contig679:28397..31355+ (Macrocystis pyrifera P11B4 male)
CGCCCATTCCAGGCGTGCGCAATAATGGCGTTCATGGCATTTCCTTCCAA
GGCCTTCCTCCCAACACCCCCCGCCTCGTGTCTCCTTCGCCATGCGCGGG
TGGCGTCAACGTCCGCATCGATCTCCAACAACCGCAACGCGCTCCGATCG
CGCGGCGCTCTTCCTCCAGCTCCCGCGCTTCCTCCGCTCGCTACGTCCAG
CAGCAGCAACAGCAGCAGCATCAAAGCGCGGGCGCGTCGAACGTCAACTT
CCCTCTCCGCCTCTGACAGCGCAAAAGACGCGGCGATGGCGGCCGTGCAA
GCGGCGGAGGACGCGCTGAACGTAGCAGCGGAGGATGCAGGCGAGACGGT
GGCGGGAGCGGGCGAAGTTCAGGCGACCGTCGCCGCTGCGCGCGCTGCCG
CCCGGAGCGCTATGGATTCGCTGCGAAGAGGTGGGGGAGGTTTCGGCGGG
GAGGGGAACGGGGGCGCTCAAGATCTTTTCGCGTCAAGGCAGGTGACTTT
GGGGAAGCTTGCGCGTGGTGTGTTGCCTGTCGCTCCACCTCTGGCTGTAG
GTGGGTACTGCTATCTTCTTGAATATCACGGTGGAGCTAATCCCTCCGTG
CTACCATGATACTTACAGTAGTACTCCACTTTTGATATGAAGACGATATA
CGAGTACCCTTAGCAGCTCGACGGCGGACTTCTCGTTGCACACTGATATC
GGTTGCTGCTCCTGAAGTATGCGCTCAAACGCCCTTCGAAGGCATCATCG
TGAACCACAGACCAGGTATCGGATTGCAGTGCCACCAGCGGCACCACACA
ACACAAAATTGCACAAGTTTTTTTATCATGATTGTCACTCCGTGAAAGCT
ACGCGAAACCTCAACCTCGGGTGCTCCTCTAACTATAGCCTGACTAGCCT
TGAGCTCAGCTCTCCTTTCGTCTTCCTCTTCTTGCGTCAGGACGTGTCGT
CGCAGGCTCGTTCCGCCGTAGAAGCGGCCCTGGCGGCTATCGCAGAAGCT
GAAACTGCCGGCCCTCCCACCGAGGCATCGACCGCCGCTTACGATGCCGT
CGGCATGGCACAGGCCGCGCTCGACCGCCGATACGCGGCGGCCTCCGATG
TCGGCGCTGCGTCCGATGCCTCGCAAGGCGAAGATGGCGCAGCTGCGGGG
CAGGCTGCCGGCGGCGTTGGCGGCAGCAGCGGCAGCGGCAGCAGCGGCAG
CGGCAGCAGCGACGTACTTCAAGACGAGGCAGAGATGACAAAGGAACCCG
AGTCTGCGCGCATGACCCGAGACAACCCCGCGGCTTCCCACAGCCATATG
TCTCACCTACTCTGGTGAGAGGGCGCTGCACGCTACGATACCCGATTGGC
GCGTGCAGTTTTTGCGACAGCTCGCCAGCGCCCGGCCTTGTTGAGTTGTC
TTAACTGTCATGCAGCGGCTAGGGACGCCACCCGAAATTGCCCGAAACTT
GATTGTGTTTTGGCTATCGTACGCAAGGTGTGTTCTGCCTCGAGCCTCGT
TTGTTTTTTCGCTTTGATGCGATCGCGACACCGATGCAGAACTCGTTTCT
CCCGTGTGCCATTCGCAAGTTTTTTTTTTTACCCTTGTGACAAATGCAAA
CGTTGCACTACTCTAGATTCAAGTAGTTTAGCCCTTCAACGCAGGTGCAG
TTCTAATCGGCTCTAAGGGGGTTAACGGTATAGTAACATAGTAAAGGTAT
TTTTTGTACCAGCCCGGCTTTCCACCCCATCCGACCATGCTCACTTTCCT
CTGGCCAACGACCTCGCACTGCATTTTTAACTTGAAAACCTGGCAAAGAA
GATTTAATACCAGTAGTTGTTGCGAACGTCCCTCACCTGCCCGTCCCTTT
CTCCAGGAGACAAGTTGCCGGCCCTGGCGACACAGTGCTGGATTGTACGG
CAGGGAACGGCTACGACAGCTTGGAGATGGCCAAGATTGTGGCGCTTGGT
GATGGCGTGGGAAAGCTCTACGTGATGGATGTGCAGGCAAGTACGCGAGC
TGAATGAATGTTCGCCGCCCGATCGTATTCCGAGTCCGAATACGATTCAA
GGGGAATGGCTTCGCTTAGGTGTGGCAAGATAGCTCGTCACCTCCCGTAG
GCAGCCCTTCGCACGAGGCGCATCGCCACAGTTGGTATTGTGAAATATTT
TCGTGCTTTAGTGAGGGGCTCGAAGGCACGCCACACTGTCGTAAACGACC
TTTTCTCTGAGGACCATGTCCCCCACCCTCGCCAAAAAATAAGCTACAGT
GAGCATGTACTGCTATATTGAAATACTGGTACCACAATACCACACCATCA
CATTATCACTATATCACGATACCACCACATCACAGTGTCACAACATCAAT
TTTTTTTATTCGGAATATCACAATGTCACAATATCTCACAGTTATCGGGG
TTGAAATGCGTGTCGCCTCGTGCTCATGTTCGCCCTCTGCAGGAGCGCGC
CCTGGAGGCCACTCGCGCAAGGCTGCGCTCTGAGCTCGGCGAAATCGCTC
TGAAACGGTCGACGCTCATCCACGGTAACTTCCGCCACATGCCCGCCGAA
CTGGAGCCCATGTCGGTGCAGCTCGTCGTGTGAGTAGCGCTCGCGGCGAC
GCGCAGGACGGGCGAGGCTGGGGGCCGAAAGGGAATCGGGCAAACCTGTG
TCGTTGCCTGCACCAATTTGGATATTTTCGATGACGATGATGGTTTGGTT
CAAACCGCAATGTCAAGGTCGGGACAGTTTCGTGGGATTCAATCGCGATT
GATGCGCACTTAAATGTAACTGCAGTCTGCCTACAATCTGACGATCGCGA
TCTGACGATGGCATCAGGTATAACCTTGGATGGTTGCCGGGAGGAGACAA
GTCGATCACGACGGAACTCGAGGATACTCTGGAGAGCATCGAGGCAGCCA
GGCGCTTGGTGAAGAGTGGGGGCATGATCAGCGTCATGCTGTACAGGGGA
CACGCAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig679:28397..31355+

>mRNA_M-pyrifera_M_contig679.16381.1 ID=mRNA_M-pyrifera_M_contig679.16381.1|Name=mRNA_M-pyrifera_M_contig679.16381.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2310bp|location=Sequence derived from alignment at M-pyrifera_M_contig679:28397..31355+ (Macrocystis pyrifera P11B4 male)
ATGGCGTTCATGGCATTTCCTTCCAAGGCCTTCCTCCCAACACCCCCCGC
CTCGTGTCTCCTTCGCCATGCGCGGGTGGCGTCAACATGGCGTTCATGGC
ATTTCCTTCCAAGGCCTTCCTCCCAACACCCCCCGCCTCGTGTCTCCTTC
GCCATGCGCGGGTGGCGTCAACCAGCAGCAACAGCAGCAGCATCAAAGCG
CGGGCGCGTCGAACGTCAACTTCCCTCTCCGCCTCTGACAGCGCAAAAGA
CGCGGCGATGGCGGCCGTGCAAGCGGCGGAGGACGCGCTGAACGTAGCAG
CGGAGGATGCAGGCGAGACGGTGGCGGGAGCGGGCGAAGTTCAGGCGACC
GTCGCCGCTGCGCGCGCTGCCGCCCGGAGCGCTATGGATTCGCTGCGAAG
AGGTGGGGGAGGTTTCGGCGGGGAGGGGAACGGGGGCGCTCAAGATCTTT
TCGCGTCAAGGCAGCAGCAGCAACAGCAGCAGCATCAAAGCGCGGGCGCG
TCGAACGTCAACTTCCCTCTCCGCCTCTGACAGCGCAAAAGACGCGGCGA
TGGCGGCCGTGCAAGCGGCGGAGGACGCGCTGAACGTAGCAGCGGAGGAT
GCAGGCGAGACGGTGGCGGGAGCGGGCGAAGTTCAGGCGACCGTCGCCGC
TGCGCGCGCTGCCGCCCGGAGCGCTATGGATTCGCTGCGAAGAGGTGGGG
GAGGTTTCGGCGGGGAGGGGAACGGGGGCGCTCAAGATCTTTTCGCGTCA
AGGCAGGACGTGTCGTCGCAGGCTCGTTCCGCCGTAGAAGCGGCCCTGGC
GGCTATCGCAGAAGCTGAAACTGCCGGCCCTCCCACCGAGGCATCGACCG
CCGCTTACGATGCCGTCGGCATGGCACAGGCCGCGCTCGACCGCCGATAC
GCGGCGGCCTCCGATGTCGGCGCTGCGTCCGATGCCTCGCAAGGCGAAGA
TGGCGCAGCTGCGGGGCAGGCTGCCGGCGGCGTTGGCGGCAGCAGCGGCA
GCGGCAGCAGCGGCAGCGGCAGCAGCGACGTACTTCAAGACGAGGCAGAG
ATGACAAAGGAACCCGAGTCTGCGCGCATGACCCGAGACAACCCCGCGGC
TTCCCACAGCCATATGTCTCACCTACTCTGGACGTGTCGTCGCAGGCTCG
TTCCGCCGTAGAAGCGGCCCTGGCGGCTATCGCAGAAGCTGAAACTGCCG
GCCCTCCCACCGAGGCATCGACCGCCGCTTACGATGCCGTCGGCATGGCA
CAGGCCGCGCTCGACCGCCGATACGCGGCGGCCTCCGATGTCGGCGCTGC
GTCCGATGCCTCGCAAGGCGAAGATGGCGCAGCTGCGGGGCAGGCTGCCG
GCGGCGTTGGCGGCAGCAGCGGCAGCGGCAGCAGCGGCAGCGGCAGCAGC
GACGTACTTCAAGACGAGGCAGAGATGACAAAGGAACCCGAGTCTGCGCG
CATGACCCGAGACAACCCCGCGGCTTCCCACAGCCATATGTCTCACCTAC
TCTGGAGACAAGTTGCCGGCCCTGGCGACACAGTGCTGGATTGTACGGCA
GGGAACGGCTACGACAGCTTGGAGATGGCCAAGATTGTGGCGCTTGGTGA
TGGCGTGGGAAAGCTCTACGTGATGGATGAGACAAGTTGCCGGCCCTGGC
GACACAGTGCTGGATTGTACGGCAGGGAACGGCTACGACAGCTTGGAGAT
GGCCAAGATTGTGGCGCTTGGTGATGGCGTGGGAAAGCTCTACGTGATGG
ATGAGCGCGCCCTGGAGGCCACTCGCGCAAGGCTGCGCTCTGAGCTCGGC
GAAATCGCTCTGAAACGGTCGACGCTCATCCACGGTAACTTCCGCCACAT
GCCCGCCGAACTGGAGCCCATGTCGGTGCAGCTCGTCGTGAGCGCGCCCT
GGAGGCCACTCGCGCAAGGCTGCGCTCTGAGCTCGGCGAAATCGCTCTGA
AACGGTCGACGCTCATCCACGGTAACTTCCGCCACATGCCCGCCGAACTG
GAGCCCATGTCGGTGCAGCTCGTCGTGTATAACCTTGGATGGTTGCCGGG
AGGAGACAAGTCGATCACGACGGAACTCGAGGATACTCTGGAGAGCATCG
AGGCAGCCAGGCGCTTGGTGAAGAGTGGGGGCATGATCAGCGTCATGCTG
TACAGGGGACACGCAGAGGTATAACCTTGGATGGTTGCCGGGAGGAGACA
AGTCGATCACGACGGAACTCGAGGATACTCTGGAGAGCATCGAGGCAGCC
AGGCGCTTGGTGAAGAGTGGGGGCATGATCAGCGTCATGCTGTACAGGGG
ACACGCAGAG
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